RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 ABCC10Q5T3U5 1492 aa35.67■■■■□ 3.3
HIPK3-205ENST00000531504 RUSC2Q8N2Y8 1516 aa35.66■■■■□ 3.3
HIPK3-205ENST00000531504 MAPKBP1O60336 1514 aa35.64■■■■□ 3.3
HIPK3-205ENST00000531504 NPM1P06748 294 aaKnown RBP eCLIP35.64■■■■□ 3.3
HIPK3-205ENST00000531504 FAM69CQ0P6D2 419 aa35.62■■■■□ 3.29
HIPK3-205ENST00000531504 DIP2BQ9P265 1576 aa35.58■■■■□ 3.29
HIPK3-205ENST00000531504 ADCY10Q96PN6 1610 aa35.52■■■■□ 3.28
HIPK3-205ENST00000531504 KDM6BO15054 1643 aa35.48■■■■□ 3.27
HIPK3-205ENST00000531504 KIAA0586Q9BVV6 1533 aa35.37■■■■□ 3.25
HIPK3-205ENST00000531504 TSPOAP1O95153 1857 aa35.36■■■■□ 3.25
HIPK3-205ENST00000531504 CUL7Q14999 1698 aa35.3■■■■□ 3.24
HIPK3-205ENST00000531504 KDM4FA0A1W2PPD8 638 aa35.29■■■■□ 3.24
HIPK3-205ENST00000531504 KIF27Q86VH2 1401 aa35.19■■■■□ 3.22
HIPK3-205ENST00000531504 IGF1RP08069 1367 aa35.18■■■■□ 3.22
HIPK3-205ENST00000531504 PTPRGP23470 1445 aa35.16■■■■□ 3.22
HIPK3-205ENST00000531504 ABCC2Q92887 1545 aa35.11■■■■□ 3.21
HIPK3-205ENST00000531504 CARMIL2Q6F5E8 1435 aa35.09■■■■□ 3.21
HIPK3-205ENST00000531504 TNIKQ9UKE5 1360 aa35.06■■■■□ 3.2
HIPK3-205ENST00000531504 GLI2P10070 1586 aa35.05■■■■□ 3.2
HIPK3-205ENST00000531504 PLB1Q6P1J6 1458 aa35.05■■■■□ 3.2
HIPK3-205ENST00000531504 TTBK1Q5TCY1 1321 aaPredicted RBP35.03■■■■□ 3.2
HIPK3-205ENST00000531504 ASXL2Q76L83 1435 aa35.02■■■■□ 3.2
HIPK3-205ENST00000531504 PPRC1Q5VV67 1664 aaKnown RBP35.01■■■■□ 3.2
HIPK3-205ENST00000531504 CARMIL1Q5VZK9 1371 aa34.98■■■■□ 3.19
HIPK3-205ENST00000531504 IQGAP2Q13576 1575 aa34.97■■■■□ 3.19
HIPK3-205ENST00000531504 UHRF1BP1LA0JNW5 1464 aa34.96■■■■□ 3.19
HIPK3-205ENST00000531504 ILDR1Q86SU0 546 aaPredicted RBP34.94■■■■□ 3.18
HIPK3-205ENST00000531504 ADGRL1O94910 1474 aa34.94■■■■□ 3.18
HIPK3-205ENST00000531504 UACAQ9BZF9 1416 aa34.89■■■■□ 3.18
HIPK3-205ENST00000531504 MAP3K4Q9Y6R4 1608 aa34.84■■■■□ 3.17
HIPK3-205ENST00000531504 TEX14Q8IWB6 1497 aa34.83■■■■□ 3.17
HIPK3-205ENST00000531504 EPRSP07814 1512 aaKnown RBP34.81■■■■□ 3.16
HIPK3-205ENST00000531504 KDM5BQ9UGL1 1544 aa34.8■■■■□ 3.16
HIPK3-205ENST00000531504 DISP1Q96F81 1524 aa34.79■■■■□ 3.16
HIPK3-205ENST00000531504 COL17A1Q9UMD9 1497 aaPredicted RBP34.76■■■■□ 3.15
HIPK3-205ENST00000531504 ZCCHC11Q5TAX3 1644 aaKnown RBP34.74■■■■□ 3.15
HIPK3-205ENST00000531504 UGGT2Q9NYU1 1516 aa34.71■■■■□ 3.15
HIPK3-205ENST00000531504 HECW2Q9P2P5 1572 aa34.7■■■■□ 3.14
HIPK3-205ENST00000531504 KIAA0556O60303 1618 aa34.65■■■■□ 3.14
HIPK3-205ENST00000531504 RAPGEF2Q9Y4G8 1499 aa34.61■■■■□ 3.13
HIPK3-205ENST00000531504 WDR7Q9Y4E6 1490 aa34.6■■■■□ 3.13
HIPK3-205ENST00000531504 CFAP43Q8NDM7 1665 aa34.5■■■■□ 3.11
HIPK3-205ENST00000531504 MAGI3Q5TCQ9 1506 aa34.47■■■■□ 3.11
HIPK3-205ENST00000531504 CTTNBP2Q8WZ74 1663 aa34.44■■■■□ 3.1
HIPK3-205ENST00000531504 CD109Q6YHK3 1445 aa34.44■■■■□ 3.1
HIPK3-205ENST00000531504 GOLGA3Q08378 1498 aa34.4■■■■□ 3.1
HIPK3-205ENST00000531504 ABCA8O94911 1581 aa34.36■■■■□ 3.09
HIPK3-205ENST00000531504 KCNH8Q96L42 1107 aa34.33■■■■□ 3.09
HIPK3-205ENST00000531504 KIF21BO75037 1637 aa34.32■■■■□ 3.08
HIPK3-205ENST00000531504 ARAP3Q8WWN8 1544 aa34.22■■■■□ 3.07
HIPK3-205ENST00000531504 FAM9AQ8IZU1 332 aaPredicted RBP34.15■■■■□ 3.06
HIPK3-205ENST00000531504 FBXO41Q8TF61 875 aa34.13■■■■□ 3.05
HIPK3-205ENST00000531504 PHLDB1Q86UU1 1377 aa34.11■■■■□ 3.05
HIPK3-205ENST00000531504 ADAMTSL3P82987 1691 aa34.08■■■■□ 3.05
HIPK3-205ENST00000531504 ABCA9Q8IUA7 1624 aa34.08■■■■□ 3.05
HIPK3-205ENST00000531504 PTPRMP28827 1452 aa34.06■■■■□ 3.04
HIPK3-205ENST00000531504 PRXQ9BXM0 1461 aa34.05■■■■□ 3.04
HIPK3-205ENST00000531504 ATP10BO94823 1461 aa34.02■■■■□ 3.04
HIPK3-205ENST00000531504 ARID3CA6NKF2 412 aa33.99■■■■□ 3.03
HIPK3-205ENST00000531504 NEO1Q92859 1461 aa33.98■■■■□ 3.03
HIPK3-205ENST00000531504 BCORL1Q5H9F3 1711 aa33.95■■■■□ 3.03
HIPK3-205ENST00000531504 RAPGEF3O95398 923 aa33.91■■■■□ 3.02
HIPK3-205ENST00000531504 PCF11O94913 1555 aaKnown RBP33.9■■■■□ 3.02
HIPK3-205ENST00000531504 MADDQ8WXG6 1647 aa33.9■■■■□ 3.02
HIPK3-205ENST00000531504 P3H3Q8IVL6 736 aa33.89■■■■□ 3.02
HIPK3-205ENST00000531504 RAPGEF6Q8TEU7 1601 aa33.89■■■■□ 3.02
HIPK3-205ENST00000531504 FRMPD1Q5SYB0 1578 aa33.88■■■■□ 3.01
HIPK3-205ENST00000531504 ARID4BQ4LE39 1312 aaPredicted RBP33.86■■■■□ 3.01
HIPK3-205ENST00000531504 SAMD9Q5K651 1589 aa33.85■■■■□ 3.01
HIPK3-205ENST00000531504 LMTK3Q96Q04 1460 aa33.82■■■■□ 3
HIPK3-205ENST00000531504 ARHGEF40Q8TER5 1519 aa33.8■■■■□ 3
HIPK3-205ENST00000531504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.8■■■■□ 3
HIPK3-205ENST00000531504 HNRNPUL2Q1KMD3 747 aaKnown RBP33.8■■■■□ 3
HIPK3-205ENST00000531504 RIMS1Q86UR5 1692 aaKnown RBP33.77■■■■□ 3
HIPK3-205ENST00000531504 RICTORQ6R327 1708 aa33.72■■■□□ 2.99
HIPK3-205ENST00000531504 CFAP74Q9C0B2 1584 aa33.72■■■□□ 2.99
HIPK3-205ENST00000531504 DENND4BO75064 1496 aaPredicted RBP33.71■■■□□ 2.99
HIPK3-205ENST00000531504 NUP153P49790 1475 aaKnown RBP33.71■■■□□ 2.99
HIPK3-205ENST00000531504 POGZQ7Z3K3 1410 aa33.66■■■□□ 2.98
HIPK3-205ENST00000531504 FANCAO15360 1455 aa33.64■■■□□ 2.98
HIPK3-205ENST00000531504 FHOD3Q2V2M9 1422 aa33.63■■■□□ 2.97
HIPK3-205ENST00000531504 AKNAQ7Z591 1439 aa33.63■■■□□ 2.97
HIPK3-205ENST00000531504 ZMYM4Q5VZL5 1548 aa33.6■■■□□ 2.97
HIPK3-205ENST00000531504 PLEKHD1A6NEE1 506 aa33.6■■■□□ 2.97
HIPK3-205ENST00000531504 EFCAB5A4FU69 1503 aa33.58■■■□□ 2.97
HIPK3-205ENST00000531504 CSRNP3Q8WYN3 585 aa33.58■■■□□ 2.97
HIPK3-205ENST00000531504 ZFYVE16Q7Z3T8 1539 aa33.57■■■□□ 2.96
HIPK3-205ENST00000531504 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.54■■■□□ 2.96
HIPK3-205ENST00000531504 HSPA2P54652 639 aa33.54■■■□□ 2.96
HIPK3-205ENST00000531504 MAGI2Q86UL8 1455 aa33.52■■■□□ 2.96
HIPK3-205ENST00000531504 TTC37Q6PGP7 1564 aa33.51■■■□□ 2.95
HIPK3-205ENST00000531504 FER1L4A9Z1Z3 1794 aa33.5■■■□□ 2.95
HIPK3-205ENST00000531504 PLPPR3Q6T4P5 718 aa33.5■■■□□ 2.95
HIPK3-205ENST00000531504 SIGLEC1Q9BZZ2 1709 aa33.48■■■□□ 2.95
HIPK3-205ENST00000531504 YEATS2Q9ULM3 1422 aa33.47■■■□□ 2.95
HIPK3-205ENST00000531504 RANGAP1P46060 587 aaPredicted RBP33.47■■■□□ 2.95
HIPK3-205ENST00000531504 HECW1Q76N89 1606 aa33.44■■■□□ 2.94
HIPK3-205ENST00000531504 CERKQ8TCT0 537 aa33.44■■■□□ 2.94
HIPK3-205ENST00000531504 EEA1Q15075 1411 aa33.41■■■□□ 2.94
HIPK3-205ENST00000531504 MLECQ14165 292 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms