RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 FAM69CQ0P6D2 419 aa23.47■■□□□ 1.35
SSH3-207ENST00000531495 ABCC10Q5T3U5 1492 aa23.34■■□□□ 1.33
SSH3-207ENST00000531495 IGF1RP08069 1367 aa23.29■■□□□ 1.32
SSH3-207ENST00000531495 KIAA0586Q9BVV6 1533 aa23.28■■□□□ 1.32
SSH3-207ENST00000531495 KIF13AQ9H1H9 1805 aa23.28■■□□□ 1.32
SSH3-207ENST00000531495 KIF27Q86VH2 1401 aa23.27■■□□□ 1.32
SSH3-207ENST00000531495 RUSC2Q8N2Y8 1516 aa23.27■■□□□ 1.32
SSH3-207ENST00000531495 MAPKBP1O60336 1514 aa23.25■■□□□ 1.31
SSH3-207ENST00000531495 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
SSH3-207ENST00000531495 PTPRGP23470 1445 aa23.2■■□□□ 1.3
SSH3-207ENST00000531495 CARMIL1Q5VZK9 1371 aa23.15■■□□□ 1.3
SSH3-207ENST00000531495 ADCY10Q96PN6 1610 aa23.15■■□□□ 1.3
SSH3-207ENST00000531495 DIP2BQ9P265 1576 aa23.15■■□□□ 1.3
SSH3-207ENST00000531495 CARMIL2Q6F5E8 1435 aa23.15■■□□□ 1.3
SSH3-207ENST00000531495 TNIKQ9UKE5 1360 aa23.12■■□□□ 1.29
SSH3-207ENST00000531495 CUL7Q14999 1698 aa23.11■■□□□ 1.29
SSH3-207ENST00000531495 KDM4FA0A1W2PPD8 638 aa23.09■■□□□ 1.29
SSH3-207ENST00000531495 KDM6BO15054 1643 aa23.08■■□□□ 1.29
SSH3-207ENST00000531495 PLB1Q6P1J6 1458 aa23.03■■□□□ 1.28
SSH3-207ENST00000531495 ABCC2Q92887 1545 aa23.02■■□□□ 1.28
SSH3-207ENST00000531495 TSPOAP1O95153 1857 aa23■■□□□ 1.27
SSH3-207ENST00000531495 ASXL2Q76L83 1435 aa22.99■■□□□ 1.27
SSH3-207ENST00000531495 UACAQ9BZF9 1416 aa22.97■■□□□ 1.27
SSH3-207ENST00000531495 UHRF1BP1LA0JNW5 1464 aa22.94■■□□□ 1.26
SSH3-207ENST00000531495 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
SSH3-207ENST00000531495 GLI2P10070 1586 aa22.9■■□□□ 1.26
SSH3-207ENST00000531495 RAPGEF2Q9Y4G8 1499 aa22.86■■□□□ 1.25
SSH3-207ENST00000531495 DISP1Q96F81 1524 aa22.85■■□□□ 1.25
SSH3-207ENST00000531495 TEX14Q8IWB6 1497 aa22.83■■□□□ 1.25
SSH3-207ENST00000531495 KDM5BQ9UGL1 1544 aa22.82■■□□□ 1.24
SSH3-207ENST00000531495 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
SSH3-207ENST00000531495 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
SSH3-207ENST00000531495 UGGT2Q9NYU1 1516 aa22.79■■□□□ 1.24
SSH3-207ENST00000531495 ADGRL1O94910 1474 aa22.76■■□□□ 1.23
SSH3-207ENST00000531495 COL17A1Q9UMD9 1497 aaPredicted RBP22.75■■□□□ 1.23
SSH3-207ENST00000531495 ILDR1Q86SU0 546 aaPredicted RBP22.74■■□□□ 1.23
SSH3-207ENST00000531495 KCNH8Q96L42 1107 aa22.74■■□□□ 1.23
SSH3-207ENST00000531495 PPRC1Q5VV67 1664 aaKnown RBP22.73■■□□□ 1.23
SSH3-207ENST00000531495 WDR7Q9Y4E6 1490 aa22.7■■□□□ 1.22
SSH3-207ENST00000531495 KIAA0556O60303 1618 aa22.69■■□□□ 1.22
SSH3-207ENST00000531495 MAP3K4Q9Y6R4 1608 aa22.69■■□□□ 1.22
SSH3-207ENST00000531495 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
SSH3-207ENST00000531495 ZCCHC11Q5TAX3 1644 aaKnown RBP22.68■■□□□ 1.22
SSH3-207ENST00000531495 CD109Q6YHK3 1445 aa22.67■■□□□ 1.22
SSH3-207ENST00000531495 MAGI3Q5TCQ9 1506 aa22.59■■□□□ 1.21
SSH3-207ENST00000531495 P3H3Q8IVL6 736 aa22.53■■□□□ 1.2
SSH3-207ENST00000531495 ABCA8O94911 1581 aa22.52■■□□□ 1.2
SSH3-207ENST00000531495 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
SSH3-207ENST00000531495 CFAP43Q8NDM7 1665 aa22.5■■□□□ 1.19
SSH3-207ENST00000531495 PRXQ9BXM0 1461 aa22.5■■□□□ 1.19
SSH3-207ENST00000531495 HECW2Q9P2P5 1572 aa22.5■■□□□ 1.19
SSH3-207ENST00000531495 CTTNBP2Q8WZ74 1663 aa22.49■■□□□ 1.19
SSH3-207ENST00000531495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.48■■□□□ 1.19
SSH3-207ENST00000531495 HNRNPUL2Q1KMD3 747 aaKnown RBP22.48■■□□□ 1.19
SSH3-207ENST00000531495 PHLDB1Q86UU1 1377 aa22.48■■□□□ 1.19
SSH3-207ENST00000531495 ARAP3Q8WWN8 1544 aa22.42■■□□□ 1.18
SSH3-207ENST00000531495 ATP10BO94823 1461 aa22.42■■□□□ 1.18
SSH3-207ENST00000531495 CSRNP3Q8WYN3 585 aa22.41■■□□□ 1.18
SSH3-207ENST00000531495 RAPGEF3O95398 923 aa22.38■■□□□ 1.17
SSH3-207ENST00000531495 ARID4BQ4LE39 1312 aaPredicted RBP22.36■■□□□ 1.17
SSH3-207ENST00000531495 PLEKHD1A6NEE1 506 aa22.33■■□□□ 1.17
SSH3-207ENST00000531495 RANGAP1P46060 587 aaPredicted RBP22.32■■□□□ 1.16
SSH3-207ENST00000531495 NEO1Q92859 1461 aa22.3■■□□□ 1.16
SSH3-207ENST00000531495 KIF21BO75037 1637 aa22.3■■□□□ 1.16
SSH3-207ENST00000531495 FBXO41Q8TF61 875 aa22.29■■□□□ 1.16
SSH3-207ENST00000531495 ABCA9Q8IUA7 1624 aa22.28■■□□□ 1.16
SSH3-207ENST00000531495 PTPRMP28827 1452 aa22.27■■□□□ 1.16
SSH3-207ENST00000531495 RAPGEF6Q8TEU7 1601 aa22.23■■□□□ 1.15
SSH3-207ENST00000531495 SAMD9Q5K651 1589 aa22.2■■□□□ 1.14
SSH3-207ENST00000531495 DENND4BO75064 1496 aaPredicted RBP22.18■■□□□ 1.14
SSH3-207ENST00000531495 EEA1Q15075 1411 aa22.18■■□□□ 1.14
SSH3-207ENST00000531495 NUP153P49790 1475 aaKnown RBP22.17■■□□□ 1.14
SSH3-207ENST00000531495 ADAMTSL3P82987 1691 aa22.17■■□□□ 1.14
SSH3-207ENST00000531495 FHOD3Q2V2M9 1422 aa22.15■■□□□ 1.14
SSH3-207ENST00000531495 AKNAQ7Z591 1439 aa22.15■■□□□ 1.14
SSH3-207ENST00000531495 POGZQ7Z3K3 1410 aa22.14■■□□□ 1.13
SSH3-207ENST00000531495 PLPPR3Q6T4P5 718 aa22.12■■□□□ 1.13
SSH3-207ENST00000531495 FANCAO15360 1455 aa22.11■■□□□ 1.13
SSH3-207ENST00000531495 BCORL1Q5H9F3 1711 aa22.09■■□□□ 1.13
SSH3-207ENST00000531495 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
SSH3-207ENST00000531495 PCF11O94913 1555 aaKnown RBP22.07■■□□□ 1.12
SSH3-207ENST00000531495 MLECQ14165 292 aa22.06■■□□□ 1.12
SSH3-207ENST00000531495 FRMPD1Q5SYB0 1578 aa22.06■■□□□ 1.12
SSH3-207ENST00000531495 MADDQ8WXG6 1647 aa22.06■■□□□ 1.12
SSH3-207ENST00000531495 CDK11AQ9UQ88 783 aaPredicted RBP22.05■■□□□ 1.12
SSH3-207ENST00000531495 HSPA2P54652 639 aa22.04■■□□□ 1.12
SSH3-207ENST00000531495 LMTK3Q96Q04 1460 aa22.03■■□□□ 1.12
SSH3-207ENST00000531495 CFAP74Q9C0B2 1584 aa22.03■■□□□ 1.12
SSH3-207ENST00000531495 MAGI2Q86UL8 1455 aa22.03■■□□□ 1.12
SSH3-207ENST00000531495 ARHGEF40Q8TER5 1519 aa22.02■■□□□ 1.12
SSH3-207ENST00000531495 EFCAB2Q5VUJ9 269 aa22.02■■□□□ 1.12
SSH3-207ENST00000531495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.11
SSH3-207ENST00000531495 UBTFP17480 764 aaKnown RBP22.01■■□□□ 1.11
SSH3-207ENST00000531495 EFCAB5A4FU69 1503 aa22.01■■□□□ 1.11
SSH3-207ENST00000531495 SCAPERQ9BY12 1400 aa22■■□□□ 1.11
SSH3-207ENST00000531495 ZFYVE16Q7Z3T8 1539 aa21.98■■□□□ 1.11
SSH3-207ENST00000531495 PLCH2O75038 1416 aa21.97■■□□□ 1.11
SSH3-207ENST00000531495 YEATS2Q9ULM3 1422 aa21.97■■□□□ 1.11
SSH3-207ENST00000531495 RIMS1Q86UR5 1692 aaKnown RBP21.97■■□□□ 1.11
SSH3-207ENST00000531495 RICTORQ6R327 1708 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms