RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 IRX6P78412 446 aaPredicted RBP17.1■□□□□ 0.33
MACF1-230ENST00000530275 C14orf37Q86TY3 774 aa17.08■□□□□ 0.33
MACF1-230ENST00000530275 PPP1R15AO75807 674 aaPredicted RBP17.06■□□□□ 0.32
MACF1-230ENST00000530275 EIF4G2P78344 907 aaKnown RBP eCLIP17.05■□□□□ 0.322e-8■■■■□ 19.7
MACF1-230ENST00000530275 GOLGA6L22H0YM25 854 aa17.05■□□□□ 0.32
MACF1-230ENST00000530275 TRIM44Q96DX7 344 aaPredicted RBP17.04■□□□□ 0.32
MACF1-230ENST00000530275 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
MACF1-230ENST00000530275 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
MACF1-230ENST00000530275 CHMP7Q8WUX9 453 aaPredicted RBP17.02■□□□□ 0.32
MACF1-230ENST00000530275 CASC1Q6TDU7 716 aa17.01■□□□□ 0.31
MACF1-230ENST00000530275 HIRIP3Q9BW71 556 aaPredicted RBP16.99■□□□□ 0.31
MACF1-230ENST00000530275 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
MACF1-230ENST00000530275 CFAP53Q96M91 514 aa16.99■□□□□ 0.31
MACF1-230ENST00000530275 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
MACF1-230ENST00000530275 MIER1Q8N108 512 aa16.98■□□□□ 0.31
MACF1-230ENST00000530275 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
MACF1-230ENST00000530275 CLIP1P30622 1438 aa16.95■□□□□ 0.3
MACF1-230ENST00000530275 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
MACF1-230ENST00000530275 PTMAP06454 111 aaKnown RBP16.94■□□□□ 0.3
MACF1-230ENST00000530275 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
MACF1-230ENST00000530275 CDCA8Q53HL2 280 aa16.92■□□□□ 0.3
MACF1-230ENST00000530275 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
MACF1-230ENST00000530275 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
MACF1-230ENST00000530275 KNSTRNQ9Y448 316 aa16.9■□□□□ 0.3
MACF1-230ENST00000530275 RGL3Q3MIN7 710 aa16.87■□□□□ 0.29
MACF1-230ENST00000530275 PLEKHD1A6NEE1 506 aa16.86■□□□□ 0.29
MACF1-230ENST00000530275 TNNT2P45379 298 aaPredicted RBP16.86■□□□□ 0.29
MACF1-230ENST00000530275 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
MACF1-230ENST00000530275 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
MACF1-230ENST00000530275 MAPK8IP3Q9UPT6 1336 aa16.85■□□□□ 0.29
MACF1-230ENST00000530275 DNTTIP2Q5QJE6 756 aaKnown RBP16.85■□□□□ 0.29
MACF1-230ENST00000530275 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.29
MACF1-230ENST00000530275 ZCCHC6Q5VYS8 1495 aaKnown RBP16.83■□□□□ 0.29
MACF1-230ENST00000530275 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.29
MACF1-230ENST00000530275 TULP1O00294 542 aaPredicted RBP16.83■□□□□ 0.28
MACF1-230ENST00000530275 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
MACF1-230ENST00000530275 CARD11Q9BXL7 1154 aa16.81■□□□□ 0.28
MACF1-230ENST00000530275 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
MACF1-230ENST00000530275 GOLGA6L6A8MZA4 724 aa16.79■□□□□ 0.28
MACF1-230ENST00000530275 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
MACF1-230ENST00000530275 CHMP4BQ9H444 224 aaKnown RBP16.77■□□□□ 0.27
MACF1-230ENST00000530275 NEUROD2Q15784 382 aa16.77■□□□□ 0.27
MACF1-230ENST00000530275 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
MACF1-230ENST00000530275 CFDP1Q9UEE9 299 aaPredicted RBP16.75■□□□□ 0.27
MACF1-230ENST00000530275 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
MACF1-230ENST00000530275 NPHP1O15259 732 aa16.74■□□□□ 0.27
MACF1-230ENST00000530275 POGKQ9P215 609 aa16.74■□□□□ 0.27
MACF1-230ENST00000530275 CEP162Q5TB80 1403 aa16.74■□□□□ 0.27
MACF1-230ENST00000530275 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
MACF1-230ENST00000530275 EEA1Q15075 1411 aa16.74■□□□□ 0.27
MACF1-230ENST00000530275 FRAT1Q92837 279 aaPredicted RBP16.72■□□□□ 0.27
MACF1-230ENST00000530275 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
MACF1-230ENST00000530275 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
MACF1-230ENST00000530275 MS4A1P11836 297 aa16.72■□□□□ 0.27
MACF1-230ENST00000530275 NAP1L5Q96NT1 182 aaPredicted RBP16.72■□□□□ 0.27
MACF1-230ENST00000530275 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
MACF1-230ENST00000530275 RGS3P49796 1198 aa16.71■□□□□ 0.26
MACF1-230ENST00000530275 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
MACF1-230ENST00000530275 FGD1P98174 961 aa16.7■□□□□ 0.26
MACF1-230ENST00000530275 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
MACF1-230ENST00000530275 PPP4R2Q9NY27 417 aa16.7■□□□□ 0.26
MACF1-230ENST00000530275 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
MACF1-230ENST00000530275 KCNJ4P48050 445 aa16.67■□□□□ 0.26
MACF1-230ENST00000530275 NAP1L2Q9ULW6 460 aaPredicted RBP16.67■□□□□ 0.26
MACF1-230ENST00000530275 GOLGA2Q08379 1002 aa16.66■□□□□ 0.26
MACF1-230ENST00000530275 NOP58Q9Y2X3 529 aaKnown RBP16.66■□□□□ 0.26
MACF1-230ENST00000530275 NRDCO43847 1150 aa16.65■□□□□ 0.26
MACF1-230ENST00000530275 U2SURPO15042 1029 aaKnown RBP16.65■□□□□ 0.26
MACF1-230ENST00000530275 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
MACF1-230ENST00000530275 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
MACF1-230ENST00000530275 GOLGA6L4A6NEF3 574 aa16.6■□□□□ 0.25
MACF1-230ENST00000530275 CCDC180Q9P1Z9 1646 aa16.6■□□□□ 0.25
MACF1-230ENST00000530275 MCCP23508 829 aa16.6■□□□□ 0.25
MACF1-230ENST00000530275 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
MACF1-230ENST00000530275 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
MACF1-230ENST00000530275 TMF1P82094 1093 aa16.59■□□□□ 0.25
MACF1-230ENST00000530275 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
MACF1-230ENST00000530275 KANK1Q14678 1352 aa16.58■□□□□ 0.25
MACF1-230ENST00000530275 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
MACF1-230ENST00000530275 RTN4Q9NQC3 1192 aaKnown RBP16.56■□□□□ 0.24
MACF1-230ENST00000530275 CCNB3Q8WWL7 1395 aa16.55■□□□□ 0.24
MACF1-230ENST00000530275 BAZ1BQ9UIG0 1483 aaKnown RBP16.55■□□□□ 0.24
MACF1-230ENST00000530275 CLSTN1O94985 981 aa16.55■□□□□ 0.24
MACF1-230ENST00000530275 SIN3AQ96ST3 1273 aa16.55■□□□□ 0.24
MACF1-230ENST00000530275 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
MACF1-230ENST00000530275 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
MACF1-230ENST00000530275 L1TD1Q5T7N2 865 aaKnown RBP16.52■□□□□ 0.24
MACF1-230ENST00000530275 MSNP26038 577 aaKnown RBP16.52■□□□□ 0.23
MACF1-230ENST00000530275 HDGFP51858 240 aaKnown RBP16.52■□□□□ 0.23
MACF1-230ENST00000530275 DRC7Q8IY82 874 aa16.52■□□□□ 0.23
MACF1-230ENST00000530275 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
MACF1-230ENST00000530275 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
MACF1-230ENST00000530275 MORC1Q86VD1 984 aa16.5■□□□□ 0.23
MACF1-230ENST00000530275 ERCC6Q03468 1493 aa16.5■□□□□ 0.23
MACF1-230ENST00000530275 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
MACF1-230ENST00000530275 MYO15BQ96JP2 1530 aa16.49■□□□□ 0.23
MACF1-230ENST00000530275 GNL2Q13823 731 aaKnown RBP16.49■□□□□ 0.23
MACF1-230ENST00000530275 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
MACF1-230ENST00000530275 EIF4G1Q04637 1599 aaKnown RBP16.48■□□□□ 0.23
MACF1-230ENST00000530275 SOX12O15370 315 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms