RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ABCC10Q5T3U5 1492 aa18.76■□□□□ 0.59
COPB1-207ENST00000529866 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
COPB1-207ENST00000529866 KIF13AQ9H1H9 1805 aa18.73■□□□□ 0.59
COPB1-207ENST00000529866 MAPKBP1O60336 1514 aa18.71■□□□□ 0.59
COPB1-207ENST00000529866 RUSC2Q8N2Y8 1516 aa18.67■□□□□ 0.58
COPB1-207ENST00000529866 DIP2BQ9P265 1576 aa18.64■□□□□ 0.58
COPB1-207ENST00000529866 KDM6BO15054 1643 aa18.6■□□□□ 0.57
COPB1-207ENST00000529866 ADCY10Q96PN6 1610 aa18.6■□□□□ 0.57
COPB1-207ENST00000529866 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
COPB1-207ENST00000529866 KDM4FA0A1W2PPD8 638 aa18.58■□□□□ 0.56
COPB1-207ENST00000529866 PTPRGP23470 1445 aa18.51■□□□□ 0.55
COPB1-207ENST00000529866 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
COPB1-207ENST00000529866 IGF1RP08069 1367 aa18.5■□□□□ 0.55
COPB1-207ENST00000529866 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
COPB1-207ENST00000529866 ABCC2Q92887 1545 aa18.45■□□□□ 0.54
COPB1-207ENST00000529866 CUL7Q14999 1698 aa18.45■□□□□ 0.54
COPB1-207ENST00000529866 TNIKQ9UKE5 1360 aa18.44■□□□□ 0.54
COPB1-207ENST00000529866 PLB1Q6P1J6 1458 aa18.44■□□□□ 0.54
COPB1-207ENST00000529866 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
COPB1-207ENST00000529866 ILDR1Q86SU0 546 aaPredicted RBP18.43■□□□□ 0.54
COPB1-207ENST00000529866 TSPOAP1O95153 1857 aa18.43■□□□□ 0.54
COPB1-207ENST00000529866 ASXL2Q76L83 1435 aa18.41■□□□□ 0.54
COPB1-207ENST00000529866 CARMIL1Q5VZK9 1371 aa18.39■□□□□ 0.53
COPB1-207ENST00000529866 GLI2P10070 1586 aa18.38■□□□□ 0.53
COPB1-207ENST00000529866 ADGRL1O94910 1474 aa18.37■□□□□ 0.53
COPB1-207ENST00000529866 UHRF1BP1LA0JNW5 1464 aa18.36■□□□□ 0.53
COPB1-207ENST00000529866 UACAQ9BZF9 1416 aa18.35■□□□□ 0.53
COPB1-207ENST00000529866 IQGAP2Q13576 1575 aa18.33■□□□□ 0.52
COPB1-207ENST00000529866 TEX14Q8IWB6 1497 aa18.33■□□□□ 0.52
COPB1-207ENST00000529866 EPRSP07814 1512 aaKnown RBP18.29■□□□□ 0.52
COPB1-207ENST00000529866 PPRC1Q5VV67 1664 aaKnown RBP18.28■□□□□ 0.52
COPB1-207ENST00000529866 KDM5BQ9UGL1 1544 aa18.27■□□□□ 0.51
COPB1-207ENST00000529866 COL17A1Q9UMD9 1497 aaPredicted RBP18.26■□□□□ 0.51
COPB1-207ENST00000529866 DISP1Q96F81 1524 aa18.26■□□□□ 0.51
COPB1-207ENST00000529866 MAP3K4Q9Y6R4 1608 aa18.22■□□□□ 0.51
COPB1-207ENST00000529866 HECW2Q9P2P5 1572 aa18.21■□□□□ 0.51
COPB1-207ENST00000529866 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
COPB1-207ENST00000529866 WDR7Q9Y4E6 1490 aa18.19■□□□□ 0.5
COPB1-207ENST00000529866 RAPGEF2Q9Y4G8 1499 aa18.18■□□□□ 0.5
COPB1-207ENST00000529866 ZCCHC11Q5TAX3 1644 aaKnown RBP18.16■□□□□ 0.5
COPB1-207ENST00000529866 KIAA0556O60303 1618 aa18.15■□□□□ 0.5
COPB1-207ENST00000529866 CD109Q6YHK3 1445 aa18.12■□□□□ 0.49
COPB1-207ENST00000529866 MAGI3Q5TCQ9 1506 aa18.12■□□□□ 0.49
COPB1-207ENST00000529866 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
COPB1-207ENST00000529866 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
COPB1-207ENST00000529866 CFAP43Q8NDM7 1665 aa18.03■□□□□ 0.48
COPB1-207ENST00000529866 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
COPB1-207ENST00000529866 ABCA8O94911 1581 aa18■□□□□ 0.47
COPB1-207ENST00000529866 FBXO41Q8TF61 875 aa18■□□□□ 0.47
COPB1-207ENST00000529866 ARAP3Q8WWN8 1544 aa17.97■□□□□ 0.47
COPB1-207ENST00000529866 PHLDB1Q86UU1 1377 aa17.96■□□□□ 0.47
COPB1-207ENST00000529866 KIF21BO75037 1637 aa17.94■□□□□ 0.46
COPB1-207ENST00000529866 CTTNBP2Q8WZ74 1663 aa17.92■□□□□ 0.46
COPB1-207ENST00000529866 PTPRMP28827 1452 aa17.91■□□□□ 0.46
COPB1-207ENST00000529866 ARID3CA6NKF2 412 aa17.9■□□□□ 0.46
COPB1-207ENST00000529866 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
COPB1-207ENST00000529866 ATP10BO94823 1461 aa17.87■□□□□ 0.45
COPB1-207ENST00000529866 NEO1Q92859 1461 aa17.86■□□□□ 0.45
COPB1-207ENST00000529866 RAPGEF3O95398 923 aa17.85■□□□□ 0.45
COPB1-207ENST00000529866 ARID4BQ4LE39 1312 aaPredicted RBP17.85■□□□□ 0.45
COPB1-207ENST00000529866 ABCA9Q8IUA7 1624 aa17.83■□□□□ 0.45
COPB1-207ENST00000529866 ADAMTSL3P82987 1691 aa17.83■□□□□ 0.44
COPB1-207ENST00000529866 P3H3Q8IVL6 736 aa17.82■□□□□ 0.44
COPB1-207ENST00000529866 PCF11O94913 1555 aaKnown RBP17.82■□□□□ 0.44
COPB1-207ENST00000529866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
COPB1-207ENST00000529866 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
COPB1-207ENST00000529866 LMTK3Q96Q04 1460 aa17.78■□□□□ 0.44
COPB1-207ENST00000529866 BCORL1Q5H9F3 1711 aa17.75■□□□□ 0.43
COPB1-207ENST00000529866 MADDQ8WXG6 1647 aa17.75■□□□□ 0.43
COPB1-207ENST00000529866 FRMPD1Q5SYB0 1578 aa17.74■□□□□ 0.43
COPB1-207ENST00000529866 ARHGEF40Q8TER5 1519 aa17.73■□□□□ 0.43
COPB1-207ENST00000529866 DENND4BO75064 1496 aaPredicted RBP17.73■□□□□ 0.43
COPB1-207ENST00000529866 POGZQ7Z3K3 1410 aa17.72■□□□□ 0.43
COPB1-207ENST00000529866 RAPGEF6Q8TEU7 1601 aa17.72■□□□□ 0.43
COPB1-207ENST00000529866 SAMD9Q5K651 1589 aa17.7■□□□□ 0.42
COPB1-207ENST00000529866 FHOD3Q2V2M9 1422 aa17.7■□□□□ 0.42
COPB1-207ENST00000529866 AKNAQ7Z591 1439 aa17.7■□□□□ 0.42
COPB1-207ENST00000529866 NUP153P49790 1475 aaKnown RBP17.69■□□□□ 0.42
COPB1-207ENST00000529866 PLEKHD1A6NEE1 506 aa17.69■□□□□ 0.42
COPB1-207ENST00000529866 FANCAO15360 1455 aa17.69■□□□□ 0.42
COPB1-207ENST00000529866 HSPA2P54652 639 aa17.67■□□□□ 0.42
COPB1-207ENST00000529866 RIMS1Q86UR5 1692 aaKnown RBP17.65■□□□□ 0.42
COPB1-207ENST00000529866 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
COPB1-207ENST00000529866 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
COPB1-207ENST00000529866 CFAP74Q9C0B2 1584 aa17.64■□□□□ 0.41
COPB1-207ENST00000529866 EFCAB5A4FU69 1503 aa17.63■□□□□ 0.41
COPB1-207ENST00000529866 MAGI2Q86UL8 1455 aa17.63■□□□□ 0.41
COPB1-207ENST00000529866 ZMYM4Q5VZL5 1548 aa17.62■□□□□ 0.41
COPB1-207ENST00000529866 ZFYVE16Q7Z3T8 1539 aa17.62■□□□□ 0.41
COPB1-207ENST00000529866 CERKQ8TCT0 537 aa17.62■□□□□ 0.41
COPB1-207ENST00000529866 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
COPB1-207ENST00000529866 RICTORQ6R327 1708 aa17.6■□□□□ 0.41
COPB1-207ENST00000529866 YEATS2Q9ULM3 1422 aa17.59■□□□□ 0.41
COPB1-207ENST00000529866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.58■□□□□ 0.414e-7■■■■□ 24.7
COPB1-207ENST00000529866 MLECQ14165 292 aa17.58■□□□□ 0.4
COPB1-207ENST00000529866 EEA1Q15075 1411 aa17.55■□□□□ 0.4
COPB1-207ENST00000529866 TTC37Q6PGP7 1564 aa17.54■□□□□ 0.4
COPB1-207ENST00000529866 SCAPERQ9BY12 1400 aa17.54■□□□□ 0.4
COPB1-207ENST00000529866 C9orf84Q5VXU9 1444 aa17.52■□□□□ 0.4
COPB1-207ENST00000529866 HECW1Q76N89 1606 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms