RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 FAM69CQ0P6D2 419 aa23.95■■□□□ 1.42
HIF3A-212ENST00000529205 KIF13AQ9H1H9 1805 aa23.94■■□□□ 1.42
HIF3A-212ENST00000529205 ABCC10Q5T3U5 1492 aa23.89■■□□□ 1.42
HIF3A-212ENST00000529205 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.41
HIF3A-212ENST00000529205 MAPKBP1O60336 1514 aa23.84■■□□□ 1.41
HIF3A-212ENST00000529205 KIAA0586Q9BVV6 1533 aa23.81■■□□□ 1.4
HIF3A-212ENST00000529205 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
HIF3A-212ENST00000529205 DIP2BQ9P265 1576 aa23.77■■□□□ 1.4
HIF3A-212ENST00000529205 ADCY10Q96PN6 1610 aa23.77■■□□□ 1.4
HIF3A-212ENST00000529205 IGF1RP08069 1367 aa23.76■■□□□ 1.39
HIF3A-212ENST00000529205 CUL7Q14999 1698 aa23.72■■□□□ 1.39
HIF3A-212ENST00000529205 KDM6BO15054 1643 aa23.7■■□□□ 1.39
HIF3A-212ENST00000529205 PTPRGP23470 1445 aa23.68■■□□□ 1.38
HIF3A-212ENST00000529205 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
HIF3A-212ENST00000529205 CARMIL2Q6F5E8 1435 aa23.66■■□□□ 1.38
HIF3A-212ENST00000529205 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
HIF3A-212ENST00000529205 TNIKQ9UKE5 1360 aa23.62■■□□□ 1.37
HIF3A-212ENST00000529205 TSPOAP1O95153 1857 aa23.61■■□□□ 1.37
HIF3A-212ENST00000529205 KDM4FA0A1W2PPD8 638 aa23.6■■□□□ 1.37
HIF3A-212ENST00000529205 ABCC2Q92887 1545 aa23.56■■□□□ 1.36
HIF3A-212ENST00000529205 PLB1Q6P1J6 1458 aa23.55■■□□□ 1.36
HIF3A-212ENST00000529205 ASXL2Q76L83 1435 aa23.52■■□□□ 1.36
HIF3A-212ENST00000529205 IQGAP2Q13576 1575 aa23.5■■□□□ 1.35
HIF3A-212ENST00000529205 UACAQ9BZF9 1416 aa23.48■■□□□ 1.35
HIF3A-212ENST00000529205 UHRF1BP1LA0JNW5 1464 aa23.48■■□□□ 1.35
HIF3A-212ENST00000529205 GLI2P10070 1586 aa23.47■■□□□ 1.35
HIF3A-212ENST00000529205 DISP1Q96F81 1524 aa23.38■■□□□ 1.33
HIF3A-212ENST00000529205 TEX14Q8IWB6 1497 aa23.36■■□□□ 1.33
HIF3A-212ENST00000529205 RAPGEF2Q9Y4G8 1499 aa23.36■■□□□ 1.33
HIF3A-212ENST00000529205 EPRSP07814 1512 aaKnown RBP23.36■■□□□ 1.33
HIF3A-212ENST00000529205 KDM5BQ9UGL1 1544 aa23.36■■□□□ 1.33
HIF3A-212ENST00000529205 PPRC1Q5VV67 1664 aaKnown RBP23.35■■□□□ 1.33
HIF3A-212ENST00000529205 ADGRL1O94910 1474 aa23.34■■□□□ 1.33
HIF3A-212ENST00000529205 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.33
HIF3A-212ENST00000529205 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
HIF3A-212ENST00000529205 ZCCHC11Q5TAX3 1644 aaKnown RBP23.28■■□□□ 1.32
HIF3A-212ENST00000529205 KIAA0556O60303 1618 aa23.27■■□□□ 1.32
HIF3A-212ENST00000529205 COL17A1Q9UMD9 1497 aaPredicted RBP23.27■■□□□ 1.32
HIF3A-212ENST00000529205 ILDR1Q86SU0 546 aaPredicted RBP23.25■■□□□ 1.31
HIF3A-212ENST00000529205 WDR7Q9Y4E6 1490 aa23.24■■□□□ 1.31
HIF3A-212ENST00000529205 FAM9AQ8IZU1 332 aaPredicted RBP23.22■■□□□ 1.31
HIF3A-212ENST00000529205 GOLGA3Q08378 1498 aa23.2■■□□□ 1.3
HIF3A-212ENST00000529205 KCNH8Q96L42 1107 aa23.18■■□□□ 1.3
HIF3A-212ENST00000529205 CD109Q6YHK3 1445 aa23.16■■□□□ 1.3
HIF3A-212ENST00000529205 MAGI3Q5TCQ9 1506 aa23.13■■□□□ 1.29
HIF3A-212ENST00000529205 CTTNBP2Q8WZ74 1663 aa23.13■■□□□ 1.29
HIF3A-212ENST00000529205 CFAP43Q8NDM7 1665 aa23.1■■□□□ 1.29
HIF3A-212ENST00000529205 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
HIF3A-212ENST00000529205 ABCA8O94911 1581 aa23.07■■□□□ 1.28
HIF3A-212ENST00000529205 PRXQ9BXM0 1461 aa22.98■■□□□ 1.27
HIF3A-212ENST00000529205 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
HIF3A-212ENST00000529205 P3H3Q8IVL6 736 aa22.96■■□□□ 1.27
HIF3A-212ENST00000529205 PHLDB1Q86UU1 1377 aa22.96■■□□□ 1.27
HIF3A-212ENST00000529205 ARAP3Q8WWN8 1544 aa22.95■■□□□ 1.26
HIF3A-212ENST00000529205 KIF21BO75037 1637 aa22.92■■□□□ 1.26
HIF3A-212ENST00000529205 ATP10BO94823 1461 aa22.92■■□□□ 1.26
HIF3A-212ENST00000529205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.91■■□□□ 1.26
HIF3A-212ENST00000529205 HNRNPUL2Q1KMD3 747 aaKnown RBP22.91■■□□□ 1.26
HIF3A-212ENST00000529205 ABCA9Q8IUA7 1624 aa22.85■■□□□ 1.25
HIF3A-212ENST00000529205 RAPGEF3O95398 923 aa22.83■■□□□ 1.25
HIF3A-212ENST00000529205 NEO1Q92859 1461 aa22.83■■□□□ 1.25
HIF3A-212ENST00000529205 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
HIF3A-212ENST00000529205 CSRNP3Q8WYN3 585 aa22.82■■□□□ 1.24
HIF3A-212ENST00000529205 PTPRMP28827 1452 aa22.79■■□□□ 1.24
HIF3A-212ENST00000529205 FBXO41Q8TF61 875 aa22.79■■□□□ 1.24
HIF3A-212ENST00000529205 RAPGEF6Q8TEU7 1601 aa22.79■■□□□ 1.24
HIF3A-212ENST00000529205 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
HIF3A-212ENST00000529205 PLEKHD1A6NEE1 506 aa22.76■■□□□ 1.23
HIF3A-212ENST00000529205 ADAMTSL3P82987 1691 aa22.75■■□□□ 1.23
HIF3A-212ENST00000529205 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
HIF3A-212ENST00000529205 BCORL1Q5H9F3 1711 aa22.68■■□□□ 1.22
HIF3A-212ENST00000529205 NUP153P49790 1475 aaKnown RBP22.68■■□□□ 1.22
HIF3A-212ENST00000529205 DENND4BO75064 1496 aaPredicted RBP22.67■■□□□ 1.22
HIF3A-212ENST00000529205 EEA1Q15075 1411 aa22.65■■□□□ 1.22
HIF3A-212ENST00000529205 FRMPD1Q5SYB0 1578 aa22.65■■□□□ 1.22
HIF3A-212ENST00000529205 FHOD3Q2V2M9 1422 aa22.64■■□□□ 1.21
HIF3A-212ENST00000529205 POGZQ7Z3K3 1410 aa22.64■■□□□ 1.21
HIF3A-212ENST00000529205 AKNAQ7Z591 1439 aa22.64■■□□□ 1.21
HIF3A-212ENST00000529205 MADDQ8WXG6 1647 aa22.64■■□□□ 1.21
HIF3A-212ENST00000529205 PCF11O94913 1555 aaKnown RBP22.63■■□□□ 1.21
HIF3A-212ENST00000529205 FANCAO15360 1455 aa22.62■■□□□ 1.21
HIF3A-212ENST00000529205 CFAP74Q9C0B2 1584 aa22.62■■□□□ 1.21
HIF3A-212ENST00000529205 ARHGEF40Q8TER5 1519 aa22.6■■□□□ 1.21
HIF3A-212ENST00000529205 LMTK3Q96Q04 1460 aa22.59■■□□□ 1.21
HIF3A-212ENST00000529205 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
HIF3A-212ENST00000529205 RIMS1Q86UR5 1692 aaKnown RBP22.56■■□□□ 1.2
HIF3A-212ENST00000529205 RICTORQ6R327 1708 aa22.56■■□□□ 1.2
HIF3A-212ENST00000529205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.56■■□□□ 1.2
HIF3A-212ENST00000529205 EFCAB5A4FU69 1503 aa22.54■■□□□ 1.2
HIF3A-212ENST00000529205 MAGI2Q86UL8 1455 aa22.54■■□□□ 1.2
HIF3A-212ENST00000529205 ZFYVE16Q7Z3T8 1539 aa22.52■■□□□ 1.2
HIF3A-212ENST00000529205 ZMYM4Q5VZL5 1548 aa22.51■■□□□ 1.19
HIF3A-212ENST00000529205 HSPA2P54652 639 aa22.5■■□□□ 1.19
HIF3A-212ENST00000529205 MLECQ14165 292 aa22.5■■□□□ 1.19
HIF3A-212ENST00000529205 TTC37Q6PGP7 1564 aa22.48■■□□□ 1.19
HIF3A-212ENST00000529205 ATP1B4Q9UN42 357 aaPredicted RBP22.48■■□□□ 1.19
HIF3A-212ENST00000529205 YEATS2Q9ULM3 1422 aa22.48■■□□□ 1.19
HIF3A-212ENST00000529205 CDK11AQ9UQ88 783 aaPredicted RBP22.47■■□□□ 1.19
HIF3A-212ENST00000529205 SCAPERQ9BY12 1400 aa22.47■■□□□ 1.19
HIF3A-212ENST00000529205 PLCH2O75038 1416 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms