RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 GSE1Q14687 1217 aa11.01□□□□□ -0.65
NXF1-205ENST00000527497 SSUH2Q9Y2M2 353 aa11.01□□□□□ -0.65
NXF1-205ENST00000527497 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
NXF1-205ENST00000527497 CAPN15O75808 1086 aa10.99□□□□□ -0.65
NXF1-205ENST00000527497 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
NXF1-205ENST00000527497 RANGAP1P46060 587 aaPredicted RBP10.99□□□□□ -0.65
NXF1-205ENST00000527497 SPDYE2Q495Y8 402 aa10.99□□□□□ -0.65
NXF1-205ENST00000527497 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
NXF1-205ENST00000527497 LMOD2Q6P5Q4 547 aa10.98□□□□□ -0.65
NXF1-205ENST00000527497 BRPF1P55201 1214 aaPredicted RBP10.97□□□□□ -0.65
NXF1-205ENST00000527497 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
NXF1-205ENST00000527497 SUPT5HO00267 1087 aaKnown RBP10.96□□□□□ -0.65
NXF1-205ENST00000527497 PABPN1Q86U42 306 aaKnown RBP eCLIP10.96□□□□□ -0.659e-7■□□□□ 8.8
NXF1-205ENST00000527497 PODXL2Q9NZ53 605 aa10.96□□□□□ -0.65
NXF1-205ENST00000527497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.95□□□□□ -0.66
NXF1-205ENST00000527497 STK25O00506 426 aa10.92□□□□□ -0.66
NXF1-205ENST00000527497 VGFO15240 615 aaPredicted RBP10.9□□□□□ -0.66
NXF1-205ENST00000527497 ABCB7O75027 752 aa10.87□□□□□ -0.67
NXF1-205ENST00000527497 NEUROD2Q15784 382 aa10.85□□□□□ -0.67
NXF1-205ENST00000527497 OSCARQ8IYS5 282 aa10.84□□□□□ -0.67
NXF1-205ENST00000527497 KCNV2Q8TDN2 545 aa10.84□□□□□ -0.67
NXF1-205ENST00000527497 WDR70Q9NW82 654 aa10.84□□□□□ -0.67
NXF1-205ENST00000527497 SGIP1Q9BQI5 828 aa10.83□□□□□ -0.68
NXF1-205ENST00000527497 NUBP1P53384 320 aa10.8□□□□□ -0.68
NXF1-205ENST00000527497 DCAF8Q5TAQ9 597 aa10.8□□□□□ -0.68
NXF1-205ENST00000527497 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
NXF1-205ENST00000527497 ZC3H15Q8WU90 426 aaKnown RBP10.77□□□□□ -0.69
NXF1-205ENST00000527497 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
NXF1-205ENST00000527497 CHRM1P11229 460 aaPredicted RBP10.74□□□□□ -0.69
NXF1-205ENST00000527497 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
NXF1-205ENST00000527497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
NXF1-205ENST00000527497 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
NXF1-205ENST00000527497 FAM212AQ96EL1 285 aa10.72□□□□□ -0.69
NXF1-205ENST00000527497 RNF39Q9H2S5 420 aa10.72□□□□□ -0.69
NXF1-205ENST00000527497 SLC24A3Q9HC58 644 aa10.72□□□□□ -0.69
NXF1-205ENST00000527497 C1QBPQ07021 282 aaKnown RBP10.68□□□□□ -0.7
NXF1-205ENST00000527497 CADPS2Q86UW7 1296 aa10.68□□□□□ -0.7
NXF1-205ENST00000527497 ARHGEF1Q92888 912 aaKnown RBP10.68□□□□□ -0.7
NXF1-205ENST00000527497 TRIM26Q12899 539 aaPredicted RBP10.67□□□□□ -0.7
NXF1-205ENST00000527497 ZMYND15Q9H091 742 aa10.66□□□□□ -0.7
NXF1-205ENST00000527497 RSPH6AQ9H0K4 717 aa10.65□□□□□ -0.7
NXF1-205ENST00000527497 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
NXF1-205ENST00000527497 TESPA1A2RU30 521 aaPredicted RBP10.62□□□□□ -0.71
NXF1-205ENST00000527497 ZMYND10O75800 440 aa10.6□□□□□ -0.71
NXF1-205ENST00000527497 DSG3P32926 999 aa10.57□□□□□ -0.72
NXF1-205ENST00000527497 SEMA3EO15041 775 aa10.55□□□□□ -0.72
NXF1-205ENST00000527497 HRCP23327 699 aa10.55□□□□□ -0.72
NXF1-205ENST00000527497 E2F4Q16254 413 aa10.55□□□□□ -0.72
NXF1-205ENST00000527497 SMYD5Q6GMV2 418 aa10.54□□□□□ -0.72
NXF1-205ENST00000527497 BARGINQ6ZT62 677 aa10.52□□□□□ -0.73
NXF1-205ENST00000527497 PYGBP11216 843 aa10.5□□□□□ -0.73
NXF1-205ENST00000527497 RASEFQ8IZ41 740 aa10.49□□□□□ -0.73
NXF1-205ENST00000527497 AK7Q96M32 723 aa10.49□□□□□ -0.73
NXF1-205ENST00000527497 MNX1P50219 401 aaPredicted RBP10.47□□□□□ -0.73
NXF1-205ENST00000527497 ARID3AQ99856 593 aa10.45□□□□□ -0.74
NXF1-205ENST00000527497 CREBZFQ9NS37 354 aa10.45□□□□□ -0.74
NXF1-205ENST00000527497 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
NXF1-205ENST00000527497 GPBP1L1Q9HC44 474 aaPredicted RBP10.44□□□□□ -0.74
NXF1-205ENST00000527497 ZNF467Q7Z7K2 595 aaPredicted RBP10.43□□□□□ -0.74
NXF1-205ENST00000527497 MFRPQ9BY79 579 aa10.41□□□□□ -0.74
NXF1-205ENST00000527497 KDM4CQ9H3R0 1056 aa10.41□□□□□ -0.74
NXF1-205ENST00000527497 SPDYE1Q8NFV5 336 aaPredicted RBP10.4□□□□□ -0.74
NXF1-205ENST00000527497 C1orf115Q9H7X2 142 aa10.4□□□□□ -0.74
NXF1-205ENST00000527497 PDAP1Q13442 181 aaKnown RBP10.39□□□□□ -0.75
NXF1-205ENST00000527497 CCDC9Q9Y3X0 531 aaKnown RBP10.39□□□□□ -0.75
NXF1-205ENST00000527497 ZBTB7CA1YPR0 619 aa10.38□□□□□ -0.75
NXF1-205ENST00000527497 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
NXF1-205ENST00000527497 ARIH1Q9Y4X5 557 aaPredicted RBP10.37□□□□□ -0.75
NXF1-205ENST00000527497 PDIA4P13667 645 aaKnown RBP10.36□□□□□ -0.75
NXF1-205ENST00000527497 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
NXF1-205ENST00000527497 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
NXF1-205ENST00000527497 PDE4DQ08499 809 aa10.33□□□□□ -0.76
NXF1-205ENST00000527497 MKRN3Q13064 507 aaKnown RBP10.33□□□□□ -0.76
NXF1-205ENST00000527497 APBB1O00213 710 aa10.32□□□□□ -0.76
NXF1-205ENST00000527497 TRIM66O15016 1216 aa10.32□□□□□ -0.76
NXF1-205ENST00000527497 PPP1R37O75864 691 aa10.32□□□□□ -0.76
NXF1-205ENST00000527497 FLIIQ13045 1269 aa10.31□□□□□ -0.76
NXF1-205ENST00000527497 ARID3CA6NKF2 412 aa10.29□□□□□ -0.76
NXF1-205ENST00000527497 NLRP6P59044 892 aa10.29□□□□□ -0.76
NXF1-205ENST00000527497 MFSD10Q14728 455 aa10.28□□□□□ -0.76
NXF1-205ENST00000527497 PDE4AP27815 886 aa10.27□□□□□ -0.77
NXF1-205ENST00000527497 LARP6Q9BRS8 491 aaKnown RBP10.27□□□□□ -0.77
NXF1-205ENST00000527497 NCKAP5LQ9HCH0 1330 aa10.27□□□□□ -0.77
NXF1-205ENST00000527497 PSEN1P49768 467 aa10.26□□□□□ -0.77
NXF1-205ENST00000527497 RBM26Q5T8P6 1007 aaKnown RBP10.26□□□□□ -0.77
NXF1-205ENST00000527497 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
NXF1-205ENST00000527497 CLEC11AQ9Y240 323 aa10.26□□□□□ -0.77
NXF1-205ENST00000527497 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
NXF1-205ENST00000527497 SOX12O15370 315 aa10.23□□□□□ -0.77
NXF1-205ENST00000527497 PCDHB8Q9UN66 801 aa10.23□□□□□ -0.77
NXF1-205ENST00000527497 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
NXF1-205ENST00000527497 CAMK2BQ13554 666 aa10.22□□□□□ -0.77
NXF1-205ENST00000527497 DDX27Q96GQ7 796 aaKnown RBP10.22□□□□□ -0.77
NXF1-205ENST00000527497 DDRGK1Q96HY6 314 aa10.22□□□□□ -0.77
NXF1-205ENST00000527497 FAM117AQ9C073 453 aa10.22□□□□□ -0.77
NXF1-205ENST00000527497 ZNF579Q8NAF0 562 aaKnown RBP10.2□□□□□ -0.78
NXF1-205ENST00000527497 A6NJR5 290 aa10.19□□□□□ -0.78
NXF1-205ENST00000527497 MLLT3P42568 568 aaPredicted RBP10.19□□□□□ -0.78
NXF1-205ENST00000527497 NECTIN2Q92692 538 aa10.19□□□□□ -0.78
NXF1-205ENST00000527497 CRISPLD2Q9H0B8 497 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms