RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
FGFR1-227ENST00000526570 RBM19Q9Y4C8 960 aaKnown RBP16.54■□□□□ 0.24
FGFR1-227ENST00000526570 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
FGFR1-227ENST00000526570 UPF2Q9HAU5 1272 aaKnown RBP16.52■□□□□ 0.24
FGFR1-227ENST00000526570 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.23
FGFR1-227ENST00000526570 IRX6P78412 446 aaPredicted RBP16.51■□□□□ 0.23
FGFR1-227ENST00000526570 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
FGFR1-227ENST00000526570 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.237e-7■■□□□ 12.4
FGFR1-227ENST00000526570 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
FGFR1-227ENST00000526570 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
FGFR1-227ENST00000526570 PKNOX2Q96KN3 472 aa16.48■□□□□ 0.23
FGFR1-227ENST00000526570 DDRGK1Q96HY6 314 aa16.47■□□□□ 0.23
FGFR1-227ENST00000526570 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
FGFR1-227ENST00000526570 MTUS2Q5JR59 1369 aa16.45■□□□□ 0.22
FGFR1-227ENST00000526570 CLIP1P30622 1438 aa16.45■□□□□ 0.22
FGFR1-227ENST00000526570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.226e-7■■□□□ 13.1
FGFR1-227ENST00000526570 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
FGFR1-227ENST00000526570 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
FGFR1-227ENST00000526570 A0A0U1RQG5 324 aaPredicted RBP16.4■□□□□ 0.22
FGFR1-227ENST00000526570 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
FGFR1-227ENST00000526570 DNTTIP2Q5QJE6 756 aaKnown RBP16.39■□□□□ 0.21
FGFR1-227ENST00000526570 LAS1LQ9Y4W2 734 aaKnown RBP16.39■□□□□ 0.21
FGFR1-227ENST00000526570 GOLGA3Q08378 1498 aa16.39■□□□□ 0.21
FGFR1-227ENST00000526570 TSPY4P0CV99 314 aa16.38■□□□□ 0.21
FGFR1-227ENST00000526570 TSPY10P0CW01 314 aa16.38■□□□□ 0.21
FGFR1-227ENST00000526570 EEA1Q15075 1411 aa16.38■□□□□ 0.21
FGFR1-227ENST00000526570 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
FGFR1-227ENST00000526570 TNNT3P45378 269 aaPredicted RBP16.36■□□□□ 0.21
FGFR1-227ENST00000526570 MROH2BQ7Z745 1585 aa16.36■□□□□ 0.21
FGFR1-227ENST00000526570 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
FGFR1-227ENST00000526570 HSP90AA2PQ14568 343 aaPredicted RBP16.35■□□□□ 0.21
FGFR1-227ENST00000526570 PLEKHD1A6NEE1 506 aa16.33■□□□□ 0.21
FGFR1-227ENST00000526570 TONSLQ96HA7 1378 aa16.33■□□□□ 0.21
FGFR1-227ENST00000526570 RSPH6AQ9H0K4 717 aa16.33■□□□□ 0.2
FGFR1-227ENST00000526570 ANO8Q9HCE9 1232 aaPredicted RBP16.31■□□□□ 0.2
FGFR1-227ENST00000526570 ARID4BQ4LE39 1312 aaPredicted RBP16.31■□□□□ 0.2
FGFR1-227ENST00000526570 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
FGFR1-227ENST00000526570 CEP162Q5TB80 1403 aa16.3■□□□□ 0.2
FGFR1-227ENST00000526570 PTMAP06454 111 aaKnown RBP16.3■□□□□ 0.2
FGFR1-227ENST00000526570 PTMSP20962 102 aa16.29■□□□□ 0.2
FGFR1-227ENST00000526570 BECN1Q14457 450 aa16.29■□□□□ 0.2
FGFR1-227ENST00000526570 PNNQ9H307 717 aaKnown RBP16.28■□□□□ 0.2
FGFR1-227ENST00000526570 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.2
FGFR1-227ENST00000526570 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.19
FGFR1-227ENST00000526570 CEP164Q9UPV0 1460 aa16.26■□□□□ 0.19
FGFR1-227ENST00000526570 L1TD1Q5T7N2 865 aaKnown RBP16.25■□□□□ 0.19
FGFR1-227ENST00000526570 RRP7BPQ9NSQ0 103 aa16.25■□□□□ 0.19
FGFR1-227ENST00000526570 CUX2O14529 1486 aa16.25■□□□□ 0.19
FGFR1-227ENST00000526570 EIF4G1Q04637 1599 aaKnown RBP16.22■□□□□ 0.19
FGFR1-227ENST00000526570 GOLGA6L22H0YM25 854 aa16.22■□□□□ 0.19
FGFR1-227ENST00000526570 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
FGFR1-227ENST00000526570 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
FGFR1-227ENST00000526570 KDM2AQ9Y2K7 1162 aa16.21■□□□□ 0.19
FGFR1-227ENST00000526570 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
FGFR1-227ENST00000526570 CARMIL1Q5VZK9 1371 aa16.18■□□□□ 0.18
FGFR1-227ENST00000526570 SENP3Q9H4L4 574 aaPredicted RBP16.17■□□□□ 0.18
FGFR1-227ENST00000526570 CFDP1Q9UEE9 299 aaPredicted RBP16.17■□□□□ 0.18
FGFR1-227ENST00000526570 MSNP26038 577 aaKnown RBP16.17■□□□□ 0.18
FGFR1-227ENST00000526570 WIZO95785 1651 aa16.16■□□□□ 0.18
FGFR1-227ENST00000526570 SOGA1O94964 1423 aa16.15■□□□□ 0.18
FGFR1-227ENST00000526570 CALRP27797 417 aaKnown RBP16.15■□□□□ 0.18
FGFR1-227ENST00000526570 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
FGFR1-227ENST00000526570 APPP05067 770 aa16.13■□□□□ 0.17
FGFR1-227ENST00000526570 CHAF1AQ13111 956 aaPredicted RBP16.12■□□□□ 0.17
FGFR1-227ENST00000526570 ARID3AQ99856 593 aa16.11■□□□□ 0.17
FGFR1-227ENST00000526570 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
FGFR1-227ENST00000526570 SALL2Q9Y467 1007 aaPredicted RBP16.11■□□□□ 0.17
FGFR1-227ENST00000526570 TIMELESSQ9UNS1 1208 aa16.1■□□□□ 0.17
FGFR1-227ENST00000526570 TDRD9Q8NDG6 1382 aaKnown RBP16.08■□□□□ 0.17
FGFR1-227ENST00000526570 PPP1R15AO75807 674 aaPredicted RBP16.08■□□□□ 0.16
FGFR1-227ENST00000526570 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
FGFR1-227ENST00000526570 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
FGFR1-227ENST00000526570 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
FGFR1-227ENST00000526570 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
FGFR1-227ENST00000526570 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
FGFR1-227ENST00000526570 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
FGFR1-227ENST00000526570 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
FGFR1-227ENST00000526570 RGL3Q3MIN7 710 aa16.02■□□□□ 0.16
FGFR1-227ENST00000526570 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
FGFR1-227ENST00000526570 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
FGFR1-227ENST00000526570 IPO9Q96P70 1041 aaKnown RBP15.99■□□□□ 0.15
FGFR1-227ENST00000526570 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
FGFR1-227ENST00000526570 HIRIP3Q9BW71 556 aaPredicted RBP15.99■□□□□ 0.15
FGFR1-227ENST00000526570 CARMIL2Q6F5E8 1435 aa15.95■□□□□ 0.14
FGFR1-227ENST00000526570 PLEKHG5O94827 1062 aa15.95■□□□□ 0.14
FGFR1-227ENST00000526570 C14orf37Q86TY3 774 aa15.95■□□□□ 0.14
FGFR1-227ENST00000526570 PDE4CQ08493 712 aa15.94■□□□□ 0.14
FGFR1-227ENST00000526570 UBE2Q2Q8WVN8 375 aa15.93■□□□□ 0.14
FGFR1-227ENST00000526570 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
FGFR1-227ENST00000526570 USP35Q9P2H5 1018 aa15.91■□□□□ 0.14
FGFR1-227ENST00000526570 EIF4G2P78344 907 aaKnown RBP eCLIP15.91■□□□□ 0.14
FGFR1-227ENST00000526570 TMC1Q8TDI8 760 aa15.91■□□□□ 0.14
FGFR1-227ENST00000526570 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
FGFR1-227ENST00000526570 MLECQ14165 292 aa15.89■□□□□ 0.13
FGFR1-227ENST00000526570 WDR43Q15061 677 aaKnown RBP eCLIP15.88■□□□□ 0.13
FGFR1-227ENST00000526570 PLCB2Q00722 1185 aa15.87■□□□□ 0.13
FGFR1-227ENST00000526570 GSE1Q14687 1217 aa15.86■□□□□ 0.13
FGFR1-227ENST00000526570 IL27Q8NEV9 243 aa15.85■□□□□ 0.13
FGFR1-227ENST00000526570 GOLGA6L6A8MZA4 724 aa15.85■□□□□ 0.13
FGFR1-227ENST00000526570 NRDCO43847 1150 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms