RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 SIN3AQ96ST3 1273 aa11.26□□□□□ -0.61
CHD7-203ENST00000525508 CFDP1Q9UEE9 299 aaPredicted RBP11.23□□□□□ -0.61
CHD7-203ENST00000525508 A0A0G2JS52 829 aa11.22□□□□□ -0.61
CHD7-203ENST00000525508 ZBTB7CA1YPR0 619 aa11.22□□□□□ -0.61
CHD7-203ENST00000525508 ANP32AP39687 249 aaKnown RBP11.21□□□□□ -0.61
CHD7-203ENST00000525508 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.61
CHD7-203ENST00000525508 BAZ1BQ9UIG0 1483 aaKnown RBP11.21□□□□□ -0.61
CHD7-203ENST00000525508 RB1CC1Q8TDY2 1594 aa11.21□□□□□ -0.61
CHD7-203ENST00000525508 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
CHD7-203ENST00000525508 WDR43Q15061 677 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHD7-203ENST00000525508 C14orf37Q86TY3 774 aa11.2□□□□□ -0.62
CHD7-203ENST00000525508 CCDC180Q9P1Z9 1646 aa11.19□□□□□ -0.62
CHD7-203ENST00000525508 GOLGA3Q08378 1498 aa11.17□□□□□ -0.62
CHD7-203ENST00000525508 PPP1R15AO75807 674 aaPredicted RBP11.17□□□□□ -0.62
CHD7-203ENST00000525508 ARID4BQ4LE39 1312 aaPredicted RBP11.17□□□□□ -0.62
CHD7-203ENST00000525508 PPM1GO15355 546 aaPredicted RBP11.16□□□□□ -0.62
CHD7-203ENST00000525508 SOGA1O94964 1423 aa11.16□□□□□ -0.62
CHD7-203ENST00000525508 HSP90AA1P07900 732 aaKnown RBP11.15□□□□□ -0.63
CHD7-203ENST00000525508 ARXQ96QS3 562 aa11.15□□□□□ -0.63
CHD7-203ENST00000525508 KIF27Q86VH2 1401 aa11.15□□□□□ -0.63
CHD7-203ENST00000525508 NEUROD2Q15784 382 aa11.14□□□□□ -0.63
CHD7-203ENST00000525508 TNNT2P45379 298 aaPredicted RBP11.13□□□□□ -0.63
CHD7-203ENST00000525508 NBR1Q14596 966 aa11.12□□□□□ -0.63
CHD7-203ENST00000525508 CARD11Q9BXL7 1154 aa11.11□□□□□ -0.63
CHD7-203ENST00000525508 TNIKQ9UKE5 1360 aa11.1□□□□□ -0.63
CHD7-203ENST00000525508 FOXD1Q16676 465 aa11.1□□□□□ -0.63
CHD7-203ENST00000525508 MLECQ14165 292 aa11.1□□□□□ -0.63
CHD7-203ENST00000525508 KANK4Q5T7N3 995 aaPredicted RBP11.09□□□□□ -0.63
CHD7-203ENST00000525508 ERCC6Q03468 1493 aa11.08□□□□□ -0.64
CHD7-203ENST00000525508 EEA1Q15075 1411 aa11.08□□□□□ -0.64
CHD7-203ENST00000525508 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.08□□□□□ -0.64
CHD7-203ENST00000525508 SUPT16HQ9Y5B9 1047 aaKnown RBP11.07□□□□□ -0.64
CHD7-203ENST00000525508 LMOD2Q6P5Q4 547 aa11.07□□□□□ -0.64
CHD7-203ENST00000525508 NACADO15069 1562 aa11.06□□□□□ -0.64
CHD7-203ENST00000525508 CARMIL1Q5VZK9 1371 aa11.06□□□□□ -0.64
CHD7-203ENST00000525508 SAFB2Q14151 953 aaKnown RBP eCLIP11.06□□□□□ -0.64
CHD7-203ENST00000525508 CUX2O14529 1486 aa11.06□□□□□ -0.64
CHD7-203ENST00000525508 CEP164Q9UPV0 1460 aa11.05□□□□□ -0.64
CHD7-203ENST00000525508 UPF2Q9HAU5 1272 aaKnown RBP11.05□□□□□ -0.64
CHD7-203ENST00000525508 TDRD9Q8NDG6 1382 aaKnown RBP11.05□□□□□ -0.64
CHD7-203ENST00000525508 DCAF11Q8TEB1 546 aa11.05□□□□□ -0.64
CHD7-203ENST00000525508 SOX12O15370 315 aa11.04□□□□□ -0.64
CHD7-203ENST00000525508 CC2D1BQ5T0F9 858 aaKnown RBP11.04□□□□□ -0.64
CHD7-203ENST00000525508 KNSTRNQ9Y448 316 aa11.04□□□□□ -0.64
CHD7-203ENST00000525508 ABCC8Q09428 1581 aa11.02□□□□□ -0.64
CHD7-203ENST00000525508 TRHP20396 242 aaPredicted RBP11.02□□□□□ -0.64
CHD7-203ENST00000525508 LAS1LQ9Y4W2 734 aaKnown RBP11.02□□□□□ -0.64
CHD7-203ENST00000525508 MROH2BQ7Z745 1585 aa11.02□□□□□ -0.65
CHD7-203ENST00000525508 GGT6Q6P531 493 aa11.01□□□□□ -0.65
CHD7-203ENST00000525508 EIF4G1Q04637 1599 aaKnown RBP11.01□□□□□ -0.65
CHD7-203ENST00000525508 BAZ1AQ9NRL2 1556 aaPredicted RBP11.01□□□□□ -0.65
CHD7-203ENST00000525508 POGKQ9P215 609 aa11□□□□□ -0.65
CHD7-203ENST00000525508 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
CHD7-203ENST00000525508 CCDC88BA6NC98 1476 aa10.99□□□□□ -0.65
CHD7-203ENST00000525508 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
CHD7-203ENST00000525508 ANP32EQ9BTT0 268 aa10.98□□□□□ -0.65
CHD7-203ENST00000525508 EIF5BO60841 1220 aaKnown RBP10.97□□□□□ -0.65
CHD7-203ENST00000525508 FRAT1Q92837 279 aaPredicted RBP10.97□□□□□ -0.65
CHD7-203ENST00000525508 U2SURPO15042 1029 aaKnown RBP10.96□□□□□ -0.65
CHD7-203ENST00000525508 STK26Q9P289 416 aa10.96□□□□□ -0.66
CHD7-203ENST00000525508 PKD2Q13563 968 aa10.95□□□□□ -0.66
CHD7-203ENST00000525508 RGS3P49796 1198 aa10.94□□□□□ -0.66
CHD7-203ENST00000525508 CFAP53Q96M91 514 aa10.94□□□□□ -0.66
CHD7-203ENST00000525508 TPRNQ4KMQ1 711 aa10.93□□□□□ -0.66
CHD7-203ENST00000525508 B4GALNT3Q6L9W6 998 aa10.93□□□□□ -0.66
CHD7-203ENST00000525508 MYH16Q9H6N6 1097 aa10.93□□□□□ -0.66
CHD7-203ENST00000525508 CDCA8Q53HL2 280 aa10.91□□□□□ -0.66
CHD7-203ENST00000525508 NUTM2DQ5VT03 806 aaPredicted RBP10.91□□□□□ -0.66
CHD7-203ENST00000525508 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.66
CHD7-203ENST00000525508 HSPA5P11021 654 aaKnown RBP10.9□□□□□ -0.66
CHD7-203ENST00000525508 FTSJ3Q8IY81 847 aaKnown RBP10.89□□□□□ -0.67
CHD7-203ENST00000525508 FHAD1B1AJZ9 1412 aa10.89□□□□□ -0.67
CHD7-203ENST00000525508 ANP32BQ92688 251 aaKnown RBP10.89□□□□□ -0.67
CHD7-203ENST00000525508 MAPK8IP3Q9UPT6 1336 aa10.89□□□□□ -0.67
CHD7-203ENST00000525508 TAOK2Q9UL54 1235 aa10.89□□□□□ -0.67
CHD7-203ENST00000525508 HNRNPMP52272 730 aaKnown RBP eCLIP10.88□□□□□ -0.671e-6■■■■□ 23.4
CHD7-203ENST00000525508 VPS8Q8N3P4 1428 aa10.87□□□□□ -0.67
CHD7-203ENST00000525508 TMF1P82094 1093 aa10.86□□□□□ -0.67
CHD7-203ENST00000525508 MPHOSPH9Q99550 1183 aa10.85□□□□□ -0.67
CHD7-203ENST00000525508 NUDCQ9Y266 331 aa10.85□□□□□ -0.67
CHD7-203ENST00000525508 RAB3GAP2Q9H2M9 1393 aa10.84□□□□□ -0.67
CHD7-203ENST00000525508 KIF3BO15066 747 aa10.84□□□□□ -0.67
CHD7-203ENST00000525508 NUP155O75694 1391 aa10.84□□□□□ -0.67
CHD7-203ENST00000525508 NUTM2FA1L443 756 aa10.84□□□□□ -0.67
CHD7-203ENST00000525508 SETD5Q9C0A6 1442 aa10.83□□□□□ -0.68
CHD7-203ENST00000525508 FHOD3Q2V2M9 1422 aa10.83□□□□□ -0.68
CHD7-203ENST00000525508 RUSC2Q8N2Y8 1516 aa10.83□□□□□ -0.68
CHD7-203ENST00000525508 WIZO95785 1651 aa10.82□□□□□ -0.68
CHD7-203ENST00000525508 L3MBTL2Q969R5 705 aa10.82□□□□□ -0.68
CHD7-203ENST00000525508 MORC1Q86VD1 984 aa10.82□□□□□ -0.68
CHD7-203ENST00000525508 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
CHD7-203ENST00000525508 ARHGAP35Q9NRY4 1499 aa10.8□□□□□ -0.68
CHD7-203ENST00000525508 EFCAB2Q5VUJ9 269 aa10.8□□□□□ -0.68
CHD7-203ENST00000525508 APBB1O00213 710 aa10.79□□□□□ -0.68
CHD7-203ENST00000525508 PAK3O75914 559 aaPredicted RBP10.79□□□□□ -0.68
CHD7-203ENST00000525508 NCLP19338 710 aaKnown RBP10.79□□□□□ -0.68
CHD7-203ENST00000525508 PDS5BQ9NTI5 1447 aa10.79□□□□□ -0.68
CHD7-203ENST00000525508 RAPGEF2Q9Y4G8 1499 aa10.78□□□□□ -0.68
CHD7-203ENST00000525508 PPP4R2Q9NY27 417 aa10.78□□□□□ -0.68
CHD7-203ENST00000525508 KANK1Q14678 1352 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms