RNA–Protein interactions for RNA: ENST00000525292.5

LINC00964-203, long intergenic non-protein coding RNA 964, humanhuman

TSL 3

Gene LINC00964, Length 620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00964-203ENST00000525292 SPOCK2Q92563 424 aa18.02■□□□□ 0.48
LINC00964-203ENST00000525292 ZCCHC6Q5VYS8 1495 aaKnown RBP17.99■□□□□ 0.47
LINC00964-203ENST00000525292 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
LINC00964-203ENST00000525292 NUBP1P53384 320 aa17.92■□□□□ 0.46
LINC00964-203ENST00000525292 HAX1O00165 279 aa17.89■□□□□ 0.45
LINC00964-203ENST00000525292 SCRIBQ14160 1630 aa17.88■□□□□ 0.45
LINC00964-203ENST00000525292 RASEFQ8IZ41 740 aa17.88■□□□□ 0.45
LINC00964-203ENST00000525292 CD44P16070 742 aaKnown RBP17.84■□□□□ 0.45
LINC00964-203ENST00000525292 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
LINC00964-203ENST00000525292 C19orf67A6NJJ6 358 aa17.83■□□□□ 0.44
LINC00964-203ENST00000525292 FAM212AQ96EL1 285 aa17.82■□□□□ 0.44
LINC00964-203ENST00000525292 TSPYL2Q9H2G4 693 aaPredicted RBP17.82■□□□□ 0.44
LINC00964-203ENST00000525292 DCAF8Q5TAQ9 597 aa17.81■□□□□ 0.44
LINC00964-203ENST00000525292 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
LINC00964-203ENST00000525292 CIZ1Q9ULV3 898 aaPredicted RBP17.78■□□□□ 0.44
LINC00964-203ENST00000525292 ZRANB1Q9UGI0 708 aa17.75■□□□□ 0.43
LINC00964-203ENST00000525292 GSE1Q14687 1217 aa17.74■□□□□ 0.43
LINC00964-203ENST00000525292 EVX2Q03828 476 aa17.7■□□□□ 0.42
LINC00964-203ENST00000525292 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
LINC00964-203ENST00000525292 AMER1Q5JTC6 1135 aaPredicted RBP17.61■□□□□ 0.41
LINC00964-203ENST00000525292 RTN4Q9NQC3 1192 aaKnown RBP17.59■□□□□ 0.41
LINC00964-203ENST00000525292 PKD2Q13563 968 aa17.58■□□□□ 0.4
LINC00964-203ENST00000525292 PHF12Q96QT6 1004 aa17.58■□□□□ 0.4
LINC00964-203ENST00000525292 PYGBP11216 843 aa17.57■□□□□ 0.4
LINC00964-203ENST00000525292 ZNF579Q8NAF0 562 aaKnown RBP17.57■□□□□ 0.4
LINC00964-203ENST00000525292 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
LINC00964-203ENST00000525292 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
LINC00964-203ENST00000525292 CHRM1P11229 460 aaPredicted RBP17.48■□□□□ 0.39
LINC00964-203ENST00000525292 KIF12Q96FN5 646 aa17.48■□□□□ 0.39
LINC00964-203ENST00000525292 CUX2O14529 1486 aa17.46■□□□□ 0.39
LINC00964-203ENST00000525292 MAP3K13O43283 966 aa17.44■□□□□ 0.38
LINC00964-203ENST00000525292 SP7Q8TDD2 431 aaPredicted RBP17.42■□□□□ 0.38
LINC00964-203ENST00000525292 PCDHB13Q9Y5F0 798 aa17.41■□□□□ 0.38
LINC00964-203ENST00000525292 CLCN6P51797 869 aa17.37■□□□□ 0.37
LINC00964-203ENST00000525292 GABBR2O75899 941 aa17.36■□□□□ 0.37
LINC00964-203ENST00000525292 SGIP1Q9BQI5 828 aa17.35■□□□□ 0.37
LINC00964-203ENST00000525292 MS4A3Q96HJ5 214 aa17.34■□□□□ 0.37
LINC00964-203ENST00000525292 PCDHB8Q9UN66 801 aa17.34■□□□□ 0.37
LINC00964-203ENST00000525292 ERCC6Q03468 1493 aa17.33■□□□□ 0.37
LINC00964-203ENST00000525292 RGL2O15211 777 aa17.33■□□□□ 0.36
LINC00964-203ENST00000525292 IFNL1Q8IU54 200 aa17.33■□□□□ 0.36
LINC00964-203ENST00000525292 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
LINC00964-203ENST00000525292 GALR2O43603 387 aaPredicted RBP17.31■□□□□ 0.36
LINC00964-203ENST00000525292 ZNF467Q7Z7K2 595 aaPredicted RBP17.3■□□□□ 0.36
LINC00964-203ENST00000525292 RNF25Q96BH1 459 aaPredicted RBP17.3■□□□□ 0.36
LINC00964-203ENST00000525292 RIOK3O14730 519 aaKnown RBP17.28■□□□□ 0.36
LINC00964-203ENST00000525292 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
LINC00964-203ENST00000525292 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
LINC00964-203ENST00000525292 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
LINC00964-203ENST00000525292 PDAP1Q13442 181 aaKnown RBP17.16■□□□□ 0.34
LINC00964-203ENST00000525292 TAOK2Q9UL54 1235 aa17.16■□□□□ 0.34
LINC00964-203ENST00000525292 HMGXB3Q12766 1538 aa17.15■□□□□ 0.34
LINC00964-203ENST00000525292 PSEN1P49768 467 aa17.14■□□□□ 0.33
LINC00964-203ENST00000525292 SMARCA2P51531 1590 aa17.14■□□□□ 0.33
LINC00964-203ENST00000525292 DCBLD2Q96PD2 775 aa17.12■□□□□ 0.33
LINC00964-203ENST00000525292 TMEM106CQ9BVX2 250 aa17.1■□□□□ 0.33
LINC00964-203ENST00000525292 TIE1P35590 1138 aa17.09■□□□□ 0.33
LINC00964-203ENST00000525292 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.08■□□□□ 0.32
LINC00964-203ENST00000525292 ZFP91Q96JP5 570 aaPredicted RBP17.08■□□□□ 0.32
LINC00964-203ENST00000525292 NESP48681 1621 aa17.07■□□□□ 0.32
LINC00964-203ENST00000525292 BMP2KQ9NSY1 1161 aaPredicted RBP17.07■□□□□ 0.32
LINC00964-203ENST00000525292 SMARCA4P51532 1647 aa17.06■□□□□ 0.32
LINC00964-203ENST00000525292 TTLL13PA6NNM8 815 aa17.04■□□□□ 0.32
LINC00964-203ENST00000525292 STK25O00506 426 aa17.03■□□□□ 0.32
LINC00964-203ENST00000525292 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
LINC00964-203ENST00000525292 ATMINO43313 823 aaPredicted RBP17.01■□□□□ 0.31
LINC00964-203ENST00000525292 THOC2Q8NI27 1593 aaKnown RBP17.01■□□□□ 0.31
LINC00964-203ENST00000525292 ASTLQ6HA08 431 aaPredicted RBP17■□□□□ 0.31
LINC00964-203ENST00000525292 BCL11BQ9C0K0 894 aaPredicted RBP17■□□□□ 0.31
LINC00964-203ENST00000525292 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
LINC00964-203ENST00000525292 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
LINC00964-203ENST00000525292 STK24Q9Y6E0 443 aa16.98■□□□□ 0.31
LINC00964-203ENST00000525292 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
LINC00964-203ENST00000525292 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
LINC00964-203ENST00000525292 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
LINC00964-203ENST00000525292 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
LINC00964-203ENST00000525292 HS6ST3Q8IZP7 471 aa16.94■□□□□ 0.3
LINC00964-203ENST00000525292 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
LINC00964-203ENST00000525292 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
LINC00964-203ENST00000525292 GOLGA2Q08379 1002 aa16.93■□□□□ 0.3
LINC00964-203ENST00000525292 PELP1Q8IZL8 1130 aaKnown RBP16.9■□□□□ 0.3
LINC00964-203ENST00000525292 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
LINC00964-203ENST00000525292 MKRN3Q13064 507 aaKnown RBP16.85■□□□□ 0.29
LINC00964-203ENST00000525292 EFCAB3Q8N7B9 438 aa16.84■□□□□ 0.29
LINC00964-203ENST00000525292 KIF21AQ7Z4S6 1674 aa16.84■□□□□ 0.29
LINC00964-203ENST00000525292 SLC39A7Q92504 469 aa16.79■□□□□ 0.28
LINC00964-203ENST00000525292 C7P10643 843 aa16.76■□□□□ 0.27
LINC00964-203ENST00000525292 IER5LQ5T953 404 aa16.76■□□□□ 0.27
LINC00964-203ENST00000525292 MROH2BQ7Z745 1585 aa16.75■□□□□ 0.27
LINC00964-203ENST00000525292 CADPSQ9ULU8 1353 aa16.75■□□□□ 0.27
LINC00964-203ENST00000525292 MRC2Q9UBG0 1479 aa16.74■□□□□ 0.27
LINC00964-203ENST00000525292 BBXQ8WY36 941 aaPredicted RBP16.74■□□□□ 0.27
LINC00964-203ENST00000525292 METRNQ9UJH8 293 aa16.74■□□□□ 0.27
LINC00964-203ENST00000525292 SOX12O15370 315 aa16.73■□□□□ 0.27
LINC00964-203ENST00000525292 WDR62O43379 1518 aa16.72■□□□□ 0.27
LINC00964-203ENST00000525292 SEC24BO95487 1268 aa16.72■□□□□ 0.27
LINC00964-203ENST00000525292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.72■□□□□ 0.27
LINC00964-203ENST00000525292 NKX1-1Q15270 411 aaPredicted RBP16.71■□□□□ 0.27
LINC00964-203ENST00000525292 PHF8Q9UPP1 1060 aa16.69■□□□□ 0.26
LINC00964-203ENST00000525292 IRX5P78411 483 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms