RNA–Protein interactions for RNA: ENST00000524815.5

PACS1-203, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4 BASIC

Gene PACS1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-203ENST00000524815 FAM69CQ0P6D2 419 aa26.83■■□□□ 1.89
PACS1-203ENST00000524815 ABCC10Q5T3U5 1492 aa26.81■■□□□ 1.88
PACS1-203ENST00000524815 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
PACS1-203ENST00000524815 NPM1P06748 294 aaKnown RBP eCLIP26.75■■□□□ 1.87
PACS1-203ENST00000524815 MAPKBP1O60336 1514 aa26.75■■□□□ 1.87
PACS1-203ENST00000524815 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
PACS1-203ENST00000524815 ADCY10Q96PN6 1610 aa26.7■■□□□ 1.86
PACS1-203ENST00000524815 KDM4FA0A1W2PPD8 638 aa26.66■■□□□ 1.86
PACS1-203ENST00000524815 KIAA0586Q9BVV6 1533 aa26.6■■□□□ 1.85
PACS1-203ENST00000524815 KDM6BO15054 1643 aa26.59■■□□□ 1.85
PACS1-203ENST00000524815 IGF1RP08069 1367 aa26.56■■□□□ 1.84
PACS1-203ENST00000524815 TSPOAP1O95153 1857 aa26.51■■□□□ 1.83
PACS1-203ENST00000524815 PTPRGP23470 1445 aa26.46■■□□□ 1.83
PACS1-203ENST00000524815 KIF27Q86VH2 1401 aa26.43■■□□□ 1.82
PACS1-203ENST00000524815 CUL7Q14999 1698 aa26.43■■□□□ 1.82
PACS1-203ENST00000524815 TTBK1Q5TCY1 1321 aaPredicted RBP26.39■■□□□ 1.82
PACS1-203ENST00000524815 ABCC2Q92887 1545 aa26.38■■□□□ 1.81
PACS1-203ENST00000524815 TNIKQ9UKE5 1360 aa26.37■■□□□ 1.81
PACS1-203ENST00000524815 ASXL2Q76L83 1435 aa26.35■■□□□ 1.81
PACS1-203ENST00000524815 ILDR1Q86SU0 546 aaPredicted RBP26.34■■□□□ 1.81
PACS1-203ENST00000524815 CARMIL1Q5VZK9 1371 aa26.33■■□□□ 1.81
PACS1-203ENST00000524815 CARMIL2Q6F5E8 1435 aa26.32■■□□□ 1.8
PACS1-203ENST00000524815 PPRC1Q5VV67 1664 aaKnown RBP26.32■■□□□ 1.8
PACS1-203ENST00000524815 PLB1Q6P1J6 1458 aa26.32■■□□□ 1.8
PACS1-203ENST00000524815 GLI2P10070 1586 aa26.32■■□□□ 1.8
PACS1-203ENST00000524815 UHRF1BP1LA0JNW5 1464 aa26.27■■□□□ 1.8
PACS1-203ENST00000524815 ADGRL1O94910 1474 aa26.25■■□□□ 1.79
PACS1-203ENST00000524815 COL17A1Q9UMD9 1497 aaPredicted RBP26.24■■□□□ 1.79
PACS1-203ENST00000524815 UACAQ9BZF9 1416 aa26.23■■□□□ 1.79
PACS1-203ENST00000524815 IQGAP2Q13576 1575 aa26.23■■□□□ 1.79
PACS1-203ENST00000524815 DISP1Q96F81 1524 aa26.2■■□□□ 1.79
PACS1-203ENST00000524815 EPRSP07814 1512 aaKnown RBP26.19■■□□□ 1.78
PACS1-203ENST00000524815 KDM5BQ9UGL1 1544 aa26.16■■□□□ 1.78
PACS1-203ENST00000524815 MAP3K4Q9Y6R4 1608 aa26.14■■□□□ 1.78
PACS1-203ENST00000524815 TEX14Q8IWB6 1497 aa26.09■■□□□ 1.77
PACS1-203ENST00000524815 UGGT2Q9NYU1 1516 aa26.08■■□□□ 1.77
PACS1-203ENST00000524815 ZCCHC11Q5TAX3 1644 aaKnown RBP26.07■■□□□ 1.76
PACS1-203ENST00000524815 HECW2Q9P2P5 1572 aa26.04■■□□□ 1.76
PACS1-203ENST00000524815 RAPGEF2Q9Y4G8 1499 aa26.02■■□□□ 1.76
PACS1-203ENST00000524815 KIAA0556O60303 1618 aa26.01■■□□□ 1.75
PACS1-203ENST00000524815 WDR7Q9Y4E6 1490 aa25.98■■□□□ 1.75
PACS1-203ENST00000524815 CD109Q6YHK3 1445 aa25.9■■□□□ 1.74
PACS1-203ENST00000524815 MAGI3Q5TCQ9 1506 aa25.9■■□□□ 1.74
PACS1-203ENST00000524815 KCNH8Q96L42 1107 aa25.87■■□□□ 1.73
PACS1-203ENST00000524815 CFAP43Q8NDM7 1665 aa25.83■■□□□ 1.73
PACS1-203ENST00000524815 ABCA8O94911 1581 aa25.83■■□□□ 1.73
PACS1-203ENST00000524815 GOLGA3Q08378 1498 aa25.79■■□□□ 1.72
PACS1-203ENST00000524815 CTTNBP2Q8WZ74 1663 aa25.77■■□□□ 1.72
PACS1-203ENST00000524815 KIF21BO75037 1637 aa25.74■■□□□ 1.71
PACS1-203ENST00000524815 ARAP3Q8WWN8 1544 aa25.72■■□□□ 1.71
PACS1-203ENST00000524815 ARID3CA6NKF2 412 aa25.66■■□□□ 1.7
PACS1-203ENST00000524815 FBXO41Q8TF61 875 aa25.65■■□□□ 1.7
PACS1-203ENST00000524815 PRXQ9BXM0 1461 aa25.65■■□□□ 1.7
PACS1-203ENST00000524815 ATP10BO94823 1461 aa25.64■■□□□ 1.69
PACS1-203ENST00000524815 PTPRMP28827 1452 aa25.6■■□□□ 1.69
PACS1-203ENST00000524815 ADAMTSL3P82987 1691 aa25.59■■□□□ 1.69
PACS1-203ENST00000524815 RAPGEF3O95398 923 aa25.59■■□□□ 1.69
PACS1-203ENST00000524815 P3H3Q8IVL6 736 aa25.59■■□□□ 1.69
PACS1-203ENST00000524815 PHLDB1Q86UU1 1377 aa25.58■■□□□ 1.69
PACS1-203ENST00000524815 ABCA9Q8IUA7 1624 aa25.57■■□□□ 1.68
PACS1-203ENST00000524815 FAM9AQ8IZU1 332 aaPredicted RBP25.52■■□□□ 1.68
PACS1-203ENST00000524815 NEO1Q92859 1461 aa25.5■■□□□ 1.67
PACS1-203ENST00000524815 FRMPD1Q5SYB0 1578 aa25.47■■□□□ 1.67
PACS1-203ENST00000524815 BCORL1Q5H9F3 1711 aa25.46■■□□□ 1.67
PACS1-203ENST00000524815 ARID4BQ4LE39 1312 aaPredicted RBP25.44■■□□□ 1.66
PACS1-203ENST00000524815 MADDQ8WXG6 1647 aa25.44■■□□□ 1.66
PACS1-203ENST00000524815 PCF11O94913 1555 aaKnown RBP25.44■■□□□ 1.66
PACS1-203ENST00000524815 SAMD9Q5K651 1589 aa25.43■■□□□ 1.66
PACS1-203ENST00000524815 LMTK3Q96Q04 1460 aa25.42■■□□□ 1.66
PACS1-203ENST00000524815 RAPGEF6Q8TEU7 1601 aa25.42■■□□□ 1.66
PACS1-203ENST00000524815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.41■■□□□ 1.66
PACS1-203ENST00000524815 HNRNPUL2Q1KMD3 747 aaKnown RBP25.41■■□□□ 1.66
PACS1-203ENST00000524815 NUP153P49790 1475 aaKnown RBP25.37■■□□□ 1.65
PACS1-203ENST00000524815 ARHGEF40Q8TER5 1519 aa25.33■■□□□ 1.65
PACS1-203ENST00000524815 DENND4BO75064 1496 aaPredicted RBP25.33■■□□□ 1.65
PACS1-203ENST00000524815 CSRNP3Q8WYN3 585 aa25.32■■□□□ 1.64
PACS1-203ENST00000524815 RIMS1Q86UR5 1692 aaKnown RBP25.32■■□□□ 1.64
PACS1-203ENST00000524815 FHOD3Q2V2M9 1422 aa25.3■■□□□ 1.64
PACS1-203ENST00000524815 AKNAQ7Z591 1439 aa25.3■■□□□ 1.64
PACS1-203ENST00000524815 RICTORQ6R327 1708 aa25.3■■□□□ 1.64
PACS1-203ENST00000524815 HSPA2P54652 639 aa25.3■■□□□ 1.64
PACS1-203ENST00000524815 PLEKHD1A6NEE1 506 aa25.28■■□□□ 1.64
PACS1-203ENST00000524815 FANCAO15360 1455 aa25.26■■□□□ 1.63
PACS1-203ENST00000524815 RANGAP1P46060 587 aaPredicted RBP25.25■■□□□ 1.63
PACS1-203ENST00000524815 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
PACS1-203ENST00000524815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.23■■□□□ 1.63
PACS1-203ENST00000524815 YEATS2Q9ULM3 1422 aa25.22■■□□□ 1.63
PACS1-203ENST00000524815 SIGLEC1Q9BZZ2 1709 aa25.22■■□□□ 1.63
PACS1-203ENST00000524815 ZMYM4Q5VZL5 1548 aa25.21■■□□□ 1.63
PACS1-203ENST00000524815 POGZQ7Z3K3 1410 aa25.2■■□□□ 1.63
PACS1-203ENST00000524815 CFAP74Q9C0B2 1584 aa25.19■■□□□ 1.62
PACS1-203ENST00000524815 ZFYVE16Q7Z3T8 1539 aa25.18■■□□□ 1.62
PACS1-203ENST00000524815 TTC37Q6PGP7 1564 aa25.18■■□□□ 1.62
PACS1-203ENST00000524815 CERKQ8TCT0 537 aa25.17■■□□□ 1.62
PACS1-203ENST00000524815 EFCAB5A4FU69 1503 aa25.16■■□□□ 1.62
PACS1-203ENST00000524815 MAGI2Q86UL8 1455 aa25.15■■□□□ 1.62
PACS1-203ENST00000524815 MLECQ14165 292 aa25.15■■□□□ 1.62
PACS1-203ENST00000524815 HECW1Q76N89 1606 aa25.13■■□□□ 1.61
PACS1-203ENST00000524815 SCAPERQ9BY12 1400 aa25.09■■□□□ 1.61
PACS1-203ENST00000524815 PLCH2O75038 1416 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms