RNA–Protein interactions for RNA: ENST00000523742.1

LINC01947-201, Transcript of long intergenic non-protein coding RNA 1947, humanhuman

TSL 4 BASIC

Gene LINC01947, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01947-201ENST00000523742 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
LINC01947-201ENST00000523742 FAM163AQ96GL9 167 aaPredicted RBP14.86□□□□□ -0.03
LINC01947-201ENST00000523742 SLC39A7Q92504 469 aa14.85□□□□□ -0.03
LINC01947-201ENST00000523742 C7P10643 843 aa14.84□□□□□ -0.03
LINC01947-201ENST00000523742 POTEFA5A3E0 1075 aa14.76□□□□□ -0.05
LINC01947-201ENST00000523742 NPM1P06748 294 aaKnown RBP eCLIP14.76□□□□□ -0.05
LINC01947-201ENST00000523742 MAMSTRQ6ZN01 415 aa14.76□□□□□ -0.05
LINC01947-201ENST00000523742 ATN1P54259 1190 aaPredicted RBP14.75□□□□□ -0.05
LINC01947-201ENST00000523742 SPDYE4A6NLX3 237 aa14.69□□□□□ -0.06
LINC01947-201ENST00000523742 SCUBE2Q9NQ36 999 aa14.68□□□□□ -0.06
LINC01947-201ENST00000523742 TRPC6Q9Y210 931 aa14.66□□□□□ -0.06
LINC01947-201ENST00000523742 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
LINC01947-201ENST00000523742 BMP2KQ9NSY1 1161 aaPredicted RBP14.6□□□□□ -0.07
LINC01947-201ENST00000523742 CCDC61Q9Y6R9 512 aa14.6□□□□□ -0.07
LINC01947-201ENST00000523742 CDAN1Q8IWY9 1227 aa14.59□□□□□ -0.07
LINC01947-201ENST00000523742 KIF12Q96FN5 646 aa14.56□□□□□ -0.08
LINC01947-201ENST00000523742 COLQQ9Y215 455 aaPredicted RBP14.54□□□□□ -0.08
LINC01947-201ENST00000523742 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
LINC01947-201ENST00000523742 MAP3K13O43283 966 aa14.45□□□□□ -0.1
LINC01947-201ENST00000523742 TIE1P35590 1138 aa14.41□□□□□ -0.1
LINC01947-201ENST00000523742 TTLL13PA6NNM8 815 aa14.39□□□□□ -0.11
LINC01947-201ENST00000523742 ST18O60284 1047 aa14.39□□□□□ -0.11
LINC01947-201ENST00000523742 SEC24BO95487 1268 aa14.36□□□□□ -0.11
LINC01947-201ENST00000523742 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
LINC01947-201ENST00000523742 MMRN1Q13201 1228 aa14.31□□□□□ -0.12
LINC01947-201ENST00000523742 SLAIN1Q8ND83 568 aa14.29□□□□□ -0.12
LINC01947-201ENST00000523742 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
LINC01947-201ENST00000523742 SPNS2Q8IVW8 549 aa14.27□□□□□ -0.13
LINC01947-201ENST00000523742 PROM2Q8N271 834 aa14.25□□□□□ -0.13
LINC01947-201ENST00000523742 IER5LQ5T953 404 aa14.21□□□□□ -0.13
LINC01947-201ENST00000523742 PCDHB13Q9Y5F0 798 aa14.14□□□□□ -0.15
LINC01947-201ENST00000523742 IFNL1Q8IU54 200 aa14.1□□□□□ -0.15
LINC01947-201ENST00000523742 MARVELD3Q96A59 401 aa14.1□□□□□ -0.15
LINC01947-201ENST00000523742 MIER1Q8N108 512 aa14.08□□□□□ -0.16
LINC01947-201ENST00000523742 SGIP1Q9BQI5 828 aa14.07□□□□□ -0.16
LINC01947-201ENST00000523742 IRX5P78411 483 aaPredicted RBP14.06□□□□□ -0.16
LINC01947-201ENST00000523742 TMEM106CQ9BVX2 250 aa14.05□□□□□ -0.16
LINC01947-201ENST00000523742 PLCG2P16885 1265 aa14.04□□□□□ -0.16
LINC01947-201ENST00000523742 TMEM121BQ9BXQ6 578 aaPredicted RBP14.02□□□□□ -0.17
LINC01947-201ENST00000523742 NUBP1P53384 320 aa13.97□□□□□ -0.17
LINC01947-201ENST00000523742 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
LINC01947-201ENST00000523742 POTEB3A0JP26 581 aa13.94□□□□□ -0.18
LINC01947-201ENST00000523742 POTEBQ6S5H4 581 aa13.94□□□□□ -0.18
LINC01947-201ENST00000523742 KRTAP3-3Q9BYR6 98 aa13.92□□□□□ -0.18
LINC01947-201ENST00000523742 KRTAP3-2Q9BYR7 98 aa13.92□□□□□ -0.18
LINC01947-201ENST00000523742 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
LINC01947-201ENST00000523742 OCEL1Q9H607 264 aa13.9□□□□□ -0.18
LINC01947-201ENST00000523742 SNPHO15079 494 aa13.88□□□□□ -0.19
LINC01947-201ENST00000523742 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.88□□□□□ -0.19
LINC01947-201ENST00000523742 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
LINC01947-201ENST00000523742 EMP3P54852 163 aa13.83□□□□□ -0.2
LINC01947-201ENST00000523742 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
LINC01947-201ENST00000523742 FAM205CA6NFA0 338 aa13.77□□□□□ -0.21
LINC01947-201ENST00000523742 PDCD7Q8N8D1 485 aaKnown RBP13.76□□□□□ -0.21
LINC01947-201ENST00000523742 FAM212AQ96EL1 285 aa13.76□□□□□ -0.21
LINC01947-201ENST00000523742 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
LINC01947-201ENST00000523742 PYGBP11216 843 aa13.73□□□□□ -0.21
LINC01947-201ENST00000523742 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
LINC01947-201ENST00000523742 C3orf67Q6ZVT6 689 aa13.65□□□□□ -0.22
LINC01947-201ENST00000523742 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
LINC01947-201ENST00000523742 NISCHQ9Y2I1 1504 aa13.56□□□□□ -0.24
LINC01947-201ENST00000523742 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
LINC01947-201ENST00000523742 HOXB3P14651 431 aaPredicted RBP13.54□□□□□ -0.24
LINC01947-201ENST00000523742 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
LINC01947-201ENST00000523742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.25
LINC01947-201ENST00000523742 MKRN3Q13064 507 aaKnown RBP13.49□□□□□ -0.25
LINC01947-201ENST00000523742 RNF166Q96A37 237 aaPredicted RBP13.49□□□□□ -0.25
LINC01947-201ENST00000523742 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
LINC01947-201ENST00000523742 HOXB1P14653 301 aaPredicted RBP13.43□□□□□ -0.26
LINC01947-201ENST00000523742 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
LINC01947-201ENST00000523742 ERBB3P21860 1342 aa13.39□□□□□ -0.27
LINC01947-201ENST00000523742 ZNF467Q7Z7K2 595 aaPredicted RBP13.37□□□□□ -0.27
LINC01947-201ENST00000523742 PSEN1P49768 467 aa13.36□□□□□ -0.27
LINC01947-201ENST00000523742 MYT1LQ9UL68 1186 aa13.36□□□□□ -0.27
LINC01947-201ENST00000523742 VARS2Q5ST30 1063 aaKnown RBP13.33□□□□□ -0.28
LINC01947-201ENST00000523742 ZNF710Q8N1W2 664 aa13.33□□□□□ -0.28
LINC01947-201ENST00000523742 BOLA1Q9Y3E2 137 aa13.33□□□□□ -0.28
LINC01947-201ENST00000523742 CHRM1P11229 460 aaPredicted RBP13.25□□□□□ -0.29
LINC01947-201ENST00000523742 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
LINC01947-201ENST00000523742 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
LINC01947-201ENST00000523742 GSE1Q14687 1217 aa13.21□□□□□ -0.29
LINC01947-201ENST00000523742 ZNF687Q8N1G0 1237 aa13.21□□□□□ -0.29
LINC01947-201ENST00000523742 G3V3G9 751 aa13.18□□□□□ -0.3
LINC01947-201ENST00000523742 FKBP8Q14318 412 aa13.18□□□□□ -0.3
LINC01947-201ENST00000523742 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
LINC01947-201ENST00000523742 TMEM92Q6UXU6 159 aa13.17□□□□□ -0.3
LINC01947-201ENST00000523742 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
LINC01947-201ENST00000523742 RIMBP2O15034 1052 aa13.11□□□□□ -0.31
LINC01947-201ENST00000523742 ANKRD13DQ6ZTN6 518 aa13.1□□□□□ -0.31
LINC01947-201ENST00000523742 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
LINC01947-201ENST00000523742 PTGER2P43116 358 aa13.07□□□□□ -0.32
LINC01947-201ENST00000523742 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
LINC01947-201ENST00000523742 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC01947-201ENST00000523742 ARSIQ5FYB1 569 aa13.01□□□□□ -0.33
LINC01947-201ENST00000523742 MICALL2Q8IY33 904 aa13.01□□□□□ -0.33
LINC01947-201ENST00000523742 EFCAB3Q8N7B9 438 aa13.01□□□□□ -0.33
LINC01947-201ENST00000523742 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
LINC01947-201ENST00000523742 LSM11P83369 360 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC01947-201ENST00000523742 PLA2G2EQ9NZK7 142 aa12.98□□□□□ -0.33
LINC01947-201ENST00000523742 FBXO3Q9UK99 471 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms