RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 MNX1P50219 401 aaPredicted RBP7.89□□□□□ -1.15
NPM1-210ENST00000523339 ZRANB1Q9UGI0 708 aa7.88□□□□□ -1.15
NPM1-210ENST00000523339 STAG3Q9UJ98 1225 aa7.87□□□□□ -1.15
NPM1-210ENST00000523339 ZNF579Q8NAF0 562 aaKnown RBP7.85□□□□□ -1.15
NPM1-210ENST00000523339 GALR2O43603 387 aaPredicted RBP7.84□□□□□ -1.15
NPM1-210ENST00000523339 PHF12Q96QT6 1004 aa7.81□□□□□ -1.16
NPM1-210ENST00000523339 PROM2Q8N271 834 aa7.8□□□□□ -1.16
NPM1-210ENST00000523339 ZCCHC6Q5VYS8 1495 aaKnown RBP7.79□□□□□ -1.16
NPM1-210ENST00000523339 DCAF1Q9Y4B6 1507 aa7.78□□□□□ -1.16
NPM1-210ENST00000523339 POTEB2H3BUK9 544 aa7.78□□□□□ -1.16
NPM1-210ENST00000523339 PELP1Q8IZL8 1130 aaKnown RBP7.77□□□□□ -1.17
NPM1-210ENST00000523339 DCBLD2Q96PD2 775 aa7.77□□□□□ -1.17
NPM1-210ENST00000523339 CLCN6P51797 869 aa7.76□□□□□ -1.17
NPM1-210ENST00000523339 NPM1P06748 294 aaKnown RBP eCLIP7.7□□□□□ -1.18
NPM1-210ENST00000523339 NESP48681 1621 aa7.7□□□□□ -1.18
NPM1-210ENST00000523339 OTUD5Q96G74 571 aa7.69□□□□□ -1.18
NPM1-210ENST00000523339 MS4A3Q96HJ5 214 aa7.68□□□□□ -1.18
NPM1-210ENST00000523339 TSPYL2Q9H2G4 693 aaPredicted RBP7.68□□□□□ -1.18
NPM1-210ENST00000523339 NCAPD3P42695 1498 aa7.68□□□□□ -1.18
NPM1-210ENST00000523339 SMARCA2P51531 1590 aa7.67□□□□□ -1.18
NPM1-210ENST00000523339 POTEJP0CG39 1038 aa7.67□□□□□ -1.18
NPM1-210ENST00000523339 PAK3O75914 559 aaPredicted RBP7.65□□□□□ -1.18
NPM1-210ENST00000523339 TRPC6Q9Y210 931 aa7.65□□□□□ -1.18
NPM1-210ENST00000523339 CCDC61Q9Y6R9 512 aa7.65□□□□□ -1.18
NPM1-210ENST00000523339 ATMINO43313 823 aaPredicted RBP7.64□□□□□ -1.19
NPM1-210ENST00000523339 PDS5BQ9NTI5 1447 aa7.63□□□□□ -1.19
NPM1-210ENST00000523339 ASTLQ6HA08 431 aaPredicted RBP7.62□□□□□ -1.19
NPM1-210ENST00000523339 MIER1Q8N108 512 aa7.62□□□□□ -1.19
NPM1-210ENST00000523339 KIF12Q96FN5 646 aa7.62□□□□□ -1.19
NPM1-210ENST00000523339 THOC2Q8NI27 1593 aaKnown RBP7.62□□□□□ -1.19
NPM1-210ENST00000523339 ATAD2BQ9ULI0 1458 aa7.62□□□□□ -1.19
NPM1-210ENST00000523339 RASEFQ8IZ41 740 aa7.61□□□□□ -1.19
NPM1-210ENST00000523339 POTEFA5A3E0 1075 aa7.59□□□□□ -1.19
NPM1-210ENST00000523339 ATN1P54259 1190 aaPredicted RBP7.59□□□□□ -1.19
NPM1-210ENST00000523339 BAZ1BQ9UIG0 1483 aaKnown RBP7.59□□□□□ -1.19
NPM1-210ENST00000523339 MAP3K13O43283 966 aa7.58□□□□□ -1.2
NPM1-210ENST00000523339 BAZ1AQ9NRL2 1556 aaPredicted RBP7.57□□□□□ -1.2
NPM1-210ENST00000523339 LAMC3Q9Y6N6 1575 aa7.57□□□□□ -1.2
NPM1-210ENST00000523339 HMGXB3Q12766 1538 aa7.57□□□□□ -1.2
NPM1-210ENST00000523339 METRNQ9UJH8 293 aa7.56□□□□□ -1.2
NPM1-210ENST00000523339 MRC2Q9UBG0 1479 aa7.55□□□□□ -1.2
NPM1-210ENST00000523339 CYB5RLQ6IPT4 315 aa7.54□□□□□ -1.2
NPM1-210ENST00000523339 BMP2KQ9NSY1 1161 aaPredicted RBP7.54□□□□□ -1.2
NPM1-210ENST00000523339 NUBP1P53384 320 aa7.53□□□□□ -1.2
NPM1-210ENST00000523339 KIF21AQ7Z4S6 1674 aa7.52□□□□□ -1.21
NPM1-210ENST00000523339 C7P10643 843 aa7.52□□□□□ -1.21
NPM1-210ENST00000523339 FKBP8Q14318 412 aa7.52□□□□□ -1.21
NPM1-210ENST00000523339 SLC39A7Q92504 469 aa7.51□□□□□ -1.21
NPM1-210ENST00000523339 PLCD3Q8N3E9 789 aa7.49□□□□□ -1.21
NPM1-210ENST00000523339 COLQQ9Y215 455 aaPredicted RBP7.49□□□□□ -1.21
NPM1-210ENST00000523339 SMARCA4P51532 1647 aa7.49□□□□□ -1.21
NPM1-210ENST00000523339 CADPSQ9ULU8 1353 aa7.48□□□□□ -1.21
NPM1-210ENST00000523339 RIMBP3CA6NJZ7 1639 aa7.48□□□□□ -1.21
NPM1-210ENST00000523339 RIMBP3BA6NNM3 1639 aa7.48□□□□□ -1.21
NPM1-210ENST00000523339 RIMBP3Q9UFD9 1639 aa7.48□□□□□ -1.21
NPM1-210ENST00000523339 WDR62O43379 1518 aa7.47□□□□□ -1.21
NPM1-210ENST00000523339 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
NPM1-210ENST00000523339 TTLL13PA6NNM8 815 aa7.46□□□□□ -1.22
NPM1-210ENST00000523339 CEP164Q9UPV0 1460 aa7.46□□□□□ -1.22
NPM1-210ENST00000523339 TIE1P35590 1138 aa7.45□□□□□ -1.22
NPM1-210ENST00000523339 ARHGEF11O15085 1522 aa7.45□□□□□ -1.22
NPM1-210ENST00000523339 POTEMA6NI47 508 aa7.44□□□□□ -1.22
NPM1-210ENST00000523339 PLSCR2Q9NRY7 297 aa7.44□□□□□ -1.22
NPM1-210ENST00000523339 PLEKHG5O94827 1062 aa7.43□□□□□ -1.22
NPM1-210ENST00000523339 IFNL1Q8IU54 200 aa7.43□□□□□ -1.22
NPM1-210ENST00000523339 POTEGQ6S5H5 508 aa7.42□□□□□ -1.22
NPM1-210ENST00000523339 PCDHB13Q9Y5F0 798 aa7.42□□□□□ -1.22
NPM1-210ENST00000523339 FANCD2Q9BXW9 1451 aa7.41□□□□□ -1.22
NPM1-210ENST00000523339 FAM163AQ96GL9 167 aaPredicted RBP7.4□□□□□ -1.22
NPM1-210ENST00000523339 TRIM35Q9UPQ4 493 aa7.4□□□□□ -1.22
NPM1-210ENST00000523339 SGIP1Q9BQI5 828 aa7.39□□□□□ -1.23
NPM1-210ENST00000523339 PYGBP11216 843 aa7.36□□□□□ -1.23
NPM1-210ENST00000523339 DCAF8Q5TAQ9 597 aa7.36□□□□□ -1.23
NPM1-210ENST00000523339 PEG3Q9GZU2 1588 aa7.36□□□□□ -1.23
NPM1-210ENST00000523339 MAMSTRQ6ZN01 415 aa7.35□□□□□ -1.23
NPM1-210ENST00000523339 TMEM106CQ9BVX2 250 aa7.35□□□□□ -1.23
NPM1-210ENST00000523339 PCDHB8Q9UN66 801 aa7.35□□□□□ -1.23
NPM1-210ENST00000523339 ILDR1Q86SU0 546 aaPredicted RBP7.34□□□□□ -1.23
NPM1-210ENST00000523339 ARAP1Q96P48 1450 aa7.33□□□□□ -1.24
NPM1-210ENST00000523339 SEC24BO95487 1268 aa7.33□□□□□ -1.24
NPM1-210ENST00000523339 ZBTB47Q9UFB7 747 aaPredicted RBP7.33□□□□□ -1.24
NPM1-210ENST00000523339 MROH2BQ7Z745 1585 aa7.33□□□□□ -1.24
NPM1-210ENST00000523339 FAM212AQ96EL1 285 aa7.32□□□□□ -1.24
NPM1-210ENST00000523339 SCUBE2Q9NQ36 999 aa7.32□□□□□ -1.24
NPM1-210ENST00000523339 IFT140Q96RY7 1462 aa7.31□□□□□ -1.24
NPM1-210ENST00000523339 IRX5P78411 483 aaPredicted RBP7.31□□□□□ -1.24
NPM1-210ENST00000523339 IER5LQ5T953 404 aa7.31□□□□□ -1.24
NPM1-210ENST00000523339 URB2Q14146 1524 aaKnown RBP7.31□□□□□ -1.24
NPM1-210ENST00000523339 ZNF608Q9ULD9 1512 aaPredicted RBP7.31□□□□□ -1.24
NPM1-210ENST00000523339 RSF1Q96T23 1441 aaPredicted RBP7.29□□□□□ -1.24
NPM1-210ENST00000523339 VASPP50552 380 aaPredicted RBP7.27□□□□□ -1.25
NPM1-210ENST00000523339 CFTRP13569 1480 aa7.27□□□□□ -1.25
NPM1-210ENST00000523339 CHMP7Q8WUX9 453 aaPredicted RBP7.26□□□□□ -1.25
NPM1-210ENST00000523339 KLHL34Q8N239 644 aa7.25□□□□□ -1.25
NPM1-210ENST00000523339 SLAIN1Q8ND83 568 aa7.25□□□□□ -1.25
NPM1-210ENST00000523339 FBXO3Q9UK99 471 aa7.25□□□□□ -1.25
NPM1-210ENST00000523339 AQRO60306 1485 aaKnown RBP eCLIP7.24□□□□□ -1.251e-10■■■■■ 53.5
NPM1-210ENST00000523339 ST18O60284 1047 aa7.23□□□□□ -1.25
NPM1-210ENST00000523339 PLCG2P16885 1265 aa7.23□□□□□ -1.25
NPM1-210ENST00000523339 IFNLR1Q8IU57 520 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms