RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 BBXQ8WY36 941 aaPredicted RBP6.29□□□□□ -1.4
CKS1BP7-201ENST00000522230 FAM212AQ96EL1 285 aa6.29□□□□□ -1.4
CKS1BP7-201ENST00000522230 PYGBP11216 843 aa6.26□□□□□ -1.41
CKS1BP7-201ENST00000522230 TRIM41Q8WV44 630 aa6.26□□□□□ -1.41
CKS1BP7-201ENST00000522230 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.26□□□□□ -1.41
CKS1BP7-201ENST00000522230 PRKAR2AP13861 404 aaKnown RBP6.25□□□□□ -1.41
CKS1BP7-201ENST00000522230 TSPYL2Q9H2G4 693 aaPredicted RBP6.25□□□□□ -1.41
CKS1BP7-201ENST00000522230 RIOK3O14730 519 aaKnown RBP6.24□□□□□ -1.41
CKS1BP7-201ENST00000522230 FARP1Q9Y4F1 1045 aaPredicted RBP6.24□□□□□ -1.41
CKS1BP7-201ENST00000522230 HS6ST3Q8IZP7 471 aa6.22□□□□□ -1.41
CKS1BP7-201ENST00000522230 FXR2P51116 673 aaKnown RBP eCLIP6.21□□□□□ -1.42
CKS1BP7-201ENST00000522230 NKX1-1Q15270 411 aaPredicted RBP6.21□□□□□ -1.42
CKS1BP7-201ENST00000522230 SPRYD3Q8NCJ5 442 aa6.21□□□□□ -1.42
CKS1BP7-201ENST00000522230 TSHZ2Q9NRE2 1034 aa6.21□□□□□ -1.42
CKS1BP7-201ENST00000522230 KDM2AQ9Y2K7 1162 aa6.21□□□□□ -1.42
CKS1BP7-201ENST00000522230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.19□□□□□ -1.42
CKS1BP7-201ENST00000522230 STK25O00506 426 aa6.19□□□□□ -1.42
CKS1BP7-201ENST00000522230 CHRM1P11229 460 aaPredicted RBP6.19□□□□□ -1.42
CKS1BP7-201ENST00000522230 CHRDL2Q6WN34 429 aa6.19□□□□□ -1.42
CKS1BP7-201ENST00000522230 PIP4P2Q8N4L2 257 aa6.19□□□□□ -1.42
CKS1BP7-201ENST00000522230 ZFP91Q96JP5 570 aaPredicted RBP6.19□□□□□ -1.42
CKS1BP7-201ENST00000522230 VGFO15240 615 aaPredicted RBP6.17□□□□□ -1.42
CKS1BP7-201ENST00000522230 BCL11BQ9C0K0 894 aaPredicted RBP6.17□□□□□ -1.42
CKS1BP7-201ENST00000522230 PCDHB8Q9UN66 801 aa6.17□□□□□ -1.42
CKS1BP7-201ENST00000522230 PCDHB13Q9Y5F0 798 aa6.17□□□□□ -1.42
CKS1BP7-201ENST00000522230 STK24Q9Y6E0 443 aa6.17□□□□□ -1.42
CKS1BP7-201ENST00000522230 VSIG10Q8N0Z9 540 aa6.16□□□□□ -1.42
CKS1BP7-201ENST00000522230 CCDC61Q9Y6R9 512 aa6.15□□□□□ -1.42
CKS1BP7-201ENST00000522230 GTPBP6O43824 516 aaPredicted RBP6.13□□□□□ -1.43
CKS1BP7-201ENST00000522230 DNAJC5Q9H3Z4 198 aa6.12□□□□□ -1.43
CKS1BP7-201ENST00000522230 TAOK2Q9UL54 1235 aa6.12□□□□□ -1.43
CKS1BP7-201ENST00000522230 SGIP1Q9BQI5 828 aa6.11□□□□□ -1.43
CKS1BP7-201ENST00000522230 MAP3K13O43283 966 aa6.1□□□□□ -1.43
CKS1BP7-201ENST00000522230 ZNF467Q7Z7K2 595 aaPredicted RBP6.09□□□□□ -1.43
CKS1BP7-201ENST00000522230 IFNL1Q8IU54 200 aa6.09□□□□□ -1.43
CKS1BP7-201ENST00000522230 PHF12Q96QT6 1004 aa6.09□□□□□ -1.43
CKS1BP7-201ENST00000522230 CD44P16070 742 aaKnown RBP6.08□□□□□ -1.44
CKS1BP7-201ENST00000522230 PSEN1P49768 467 aa6.08□□□□□ -1.44
CKS1BP7-201ENST00000522230 PDAP1Q13442 181 aaKnown RBP6.08□□□□□ -1.44
CKS1BP7-201ENST00000522230 ZRANB1Q9UGI0 708 aa6.08□□□□□ -1.44
CKS1BP7-201ENST00000522230 PAK3O75914 559 aaPredicted RBP6.07□□□□□ -1.44
CKS1BP7-201ENST00000522230 KIF12Q96FN5 646 aa6.07□□□□□ -1.44
CKS1BP7-201ENST00000522230 ZNF579Q8NAF0 562 aaKnown RBP6.06□□□□□ -1.44
CKS1BP7-201ENST00000522230 BCANQ96GW7 911 aa6.05□□□□□ -1.44
CKS1BP7-201ENST00000522230 PRKCSHP14314 528 aaPredicted RBP6.04□□□□□ -1.44
CKS1BP7-201ENST00000522230 TRPC6Q9Y210 931 aa6.04□□□□□ -1.44
CKS1BP7-201ENST00000522230 MFRPQ9BY79 579 aa6.03□□□□□ -1.44
CKS1BP7-201ENST00000522230 CABP2Q9NPB3 220 aa6.03□□□□□ -1.44
CKS1BP7-201ENST00000522230 CADPS2Q86UW7 1296 aa6.02□□□□□ -1.45
CKS1BP7-201ENST00000522230 EFCAB3Q8N7B9 438 aa6.02□□□□□ -1.45
CKS1BP7-201ENST00000522230 PPP1R37O75864 691 aa6□□□□□ -1.45
CKS1BP7-201ENST00000522230 MS4A3Q96HJ5 214 aa6□□□□□ -1.45
CKS1BP7-201ENST00000522230 PHF8Q9UPP1 1060 aa6□□□□□ -1.45
CKS1BP7-201ENST00000522230 C19orf67A6NJJ6 358 aa5.99□□□□□ -1.45
CKS1BP7-201ENST00000522230 EVX2Q03828 476 aa5.97□□□□□ -1.45
CKS1BP7-201ENST00000522230 FBXO22Q8NEZ5 403 aa5.97□□□□□ -1.45
CKS1BP7-201ENST00000522230 TMEM106CQ9BVX2 250 aa5.96□□□□□ -1.46
CKS1BP7-201ENST00000522230 RYDENQ9NUL5 291 aaKnown RBP5.96□□□□□ -1.46
CKS1BP7-201ENST00000522230 TPRNQ4KMQ1 711 aa5.95□□□□□ -1.46
CKS1BP7-201ENST00000522230 MS4A4AQ96JQ5 239 aa5.94□□□□□ -1.46
CKS1BP7-201ENST00000522230 HAX1O00165 279 aa5.93□□□□□ -1.46
CKS1BP7-201ENST00000522230 GALR2O43603 387 aaPredicted RBP5.93□□□□□ -1.46
CKS1BP7-201ENST00000522230 NLRP6P59044 892 aa5.93□□□□□ -1.46
CKS1BP7-201ENST00000522230 NBR1Q14596 966 aa5.93□□□□□ -1.46
CKS1BP7-201ENST00000522230 SOX12O15370 315 aa5.91□□□□□ -1.46
CKS1BP7-201ENST00000522230 BMP2KQ9NSY1 1161 aaPredicted RBP5.91□□□□□ -1.46
CKS1BP7-201ENST00000522230 TTLL13PA6NNM8 815 aa5.9□□□□□ -1.46
CKS1BP7-201ENST00000522230 GOLGA2Q08379 1002 aa5.9□□□□□ -1.46
CKS1BP7-201ENST00000522230 KCNV2Q8TDN2 545 aa5.9□□□□□ -1.46
CKS1BP7-201ENST00000522230 MKRN3Q13064 507 aaKnown RBP5.88□□□□□ -1.47
CKS1BP7-201ENST00000522230 TIE1P35590 1138 aa5.87□□□□□ -1.47
CKS1BP7-201ENST00000522230 WDR70Q9NW82 654 aa5.87□□□□□ -1.47
CKS1BP7-201ENST00000522230 TRIM35Q9UPQ4 493 aa5.87□□□□□ -1.47
CKS1BP7-201ENST00000522230 NCKAP5LQ9HCH0 1330 aa5.87□□□□□ -1.47
CKS1BP7-201ENST00000522230 DPY19L2Q6NUT2 758 aa5.86□□□□□ -1.47
CKS1BP7-201ENST00000522230 ATN1P54259 1190 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP7-201ENST00000522230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.85□□□□□ -1.47
CKS1BP7-201ENST00000522230 LARP6Q9BRS8 491 aaKnown RBP5.84□□□□□ -1.47
CKS1BP7-201ENST00000522230 ATMINO43313 823 aaPredicted RBP5.82□□□□□ -1.48
CKS1BP7-201ENST00000522230 P3H3Q8IVL6 736 aa5.82□□□□□ -1.48
CKS1BP7-201ENST00000522230 CRISPLD2Q9H0B8 497 aa5.81□□□□□ -1.48
CKS1BP7-201ENST00000522230 E2F4Q16254 413 aa5.8□□□□□ -1.48
CKS1BP7-201ENST00000522230 ILDR1Q86SU0 546 aaPredicted RBP5.8□□□□□ -1.48
CKS1BP7-201ENST00000522230 PDCD7Q8N8D1 485 aaKnown RBP5.8□□□□□ -1.48
CKS1BP7-201ENST00000522230 GABBR2O75899 941 aa5.79□□□□□ -1.48
CKS1BP7-201ENST00000522230 PELP1Q8IZL8 1130 aaKnown RBP5.79□□□□□ -1.48
CKS1BP7-201ENST00000522230 PDE4AP27815 886 aa5.78□□□□□ -1.48
CKS1BP7-201ENST00000522230 MFSD10Q14728 455 aa5.78□□□□□ -1.48
CKS1BP7-201ENST00000522230 ASTLQ6HA08 431 aaPredicted RBP5.78□□□□□ -1.48
CKS1BP7-201ENST00000522230 MICALL2Q8IY33 904 aa5.78□□□□□ -1.48
CKS1BP7-201ENST00000522230 SEMA3EO15041 775 aa5.77□□□□□ -1.49
CKS1BP7-201ENST00000522230 IRX5P78411 483 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP7-201ENST00000522230 DDX27Q96GQ7 796 aaKnown RBP5.77□□□□□ -1.49
CKS1BP7-201ENST00000522230 POTEHQ6S545 545 aa5.76□□□□□ -1.49
CKS1BP7-201ENST00000522230 PPP1R15BQ5SWA1 713 aa5.75□□□□□ -1.49
CKS1BP7-201ENST00000522230 LMOD2Q6P5Q4 547 aa5.75□□□□□ -1.49
CKS1BP7-201ENST00000522230 ARHGEF1Q92888 912 aaKnown RBP5.75□□□□□ -1.49
CKS1BP7-201ENST00000522230 COLQQ9Y215 455 aaPredicted RBP5.75□□□□□ -1.49
CKS1BP7-201ENST00000522230 DSG2Q14126 1118 aa5.74□□□□□ -1.49
CKS1BP7-201ENST00000522230 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms