RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 AQRO60306 1485 aaKnown RBP eCLIP39.45■■■■□ 3.91
COL13A1-214ENST00000522165 KANK4Q5T7N3 995 aaPredicted RBP39.44■■■■□ 3.9
COL13A1-214ENST00000522165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.39■■■■□ 3.9
COL13A1-214ENST00000522165 FHAD1B1AJZ9 1412 aa39.39■■■■□ 3.9
COL13A1-214ENST00000522165 THOC2Q8NI27 1593 aaKnown RBP39.36■■■■□ 3.89
COL13A1-214ENST00000522165 GRIN2BQ13224 1484 aa39.35■■■■□ 3.89
COL13A1-214ENST00000522165 MAP3K1Q13233 1512 aa39.35■■■■□ 3.89
COL13A1-214ENST00000522165 ADAMTS12P58397 1594 aa39.32■■■■□ 3.89
COL13A1-214ENST00000522165 P3H3Q8IVL6 736 aa39.32■■■■□ 3.88
COL13A1-214ENST00000522165 ZNF608Q9ULD9 1512 aaPredicted RBP39.32■■■■□ 3.88
COL13A1-214ENST00000522165 FHOD3Q2V2M9 1422 aa39.31■■■■□ 3.88
COL13A1-214ENST00000522165 CCER1Q8TC90 406 aaPredicted RBP39.28■■■■□ 3.88
COL13A1-214ENST00000522165 TIAM1Q13009 1591 aa39.28■■■■□ 3.88
COL13A1-214ENST00000522165 PCF11O94913 1555 aaKnown RBP39.25■■■■□ 3.87
COL13A1-214ENST00000522165 SAMD9Q5K651 1589 aa39.23■■■■□ 3.87
COL13A1-214ENST00000522165 HNRNPUL2Q1KMD3 747 aaKnown RBP39.2■■■■□ 3.87
COL13A1-214ENST00000522165 FYCO1Q9BQS8 1478 aa39.17■■■■□ 3.86
COL13A1-214ENST00000522165 CASKIN1Q8WXD9 1431 aa39.15■■■■□ 3.86
COL13A1-214ENST00000522165 EIF4G3O43432 1585 aaKnown RBP39.14■■■■□ 3.86
COL13A1-214ENST00000522165 CFAP43Q8NDM7 1665 aa39.14■■■■□ 3.86
COL13A1-214ENST00000522165 FMN1Q68DA7 1419 aa39.13■■■■□ 3.86
COL13A1-214ENST00000522165 RRBP1Q9P2E9 1410 aaKnown RBP39.13■■■■□ 3.86
COL13A1-214ENST00000522165 LRRC9Q6ZRR7 1453 aa39.11■■■■□ 3.85
COL13A1-214ENST00000522165 SNAPC4Q5SXM2 1469 aa39.04■■■■□ 3.84
COL13A1-214ENST00000522165 IQGAP2Q13576 1575 aa39.04■■■■□ 3.84
COL13A1-214ENST00000522165 ATP1B4Q9UN42 357 aaPredicted RBP38.99■■■■□ 3.83
COL13A1-214ENST00000522165 CCNB3Q8WWL7 1395 aa38.97■■■■□ 3.83
COL13A1-214ENST00000522165 MAGI1Q96QZ7 1491 aaPredicted RBP38.92■■■■□ 3.82
COL13A1-214ENST00000522165 GRIN2AQ12879 1464 aa38.9■■■■□ 3.82
COL13A1-214ENST00000522165 UGGT2Q9NYU1 1516 aa38.86■■■■□ 3.81
COL13A1-214ENST00000522165 KIAA0586Q9BVV6 1533 aa38.85■■■■□ 3.81
COL13A1-214ENST00000522165 PHLDB1Q86UU1 1377 aa38.83■■■■□ 3.81
COL13A1-214ENST00000522165 SYNJ2O15056 1496 aa38.79■■■■□ 3.8
COL13A1-214ENST00000522165 LRRIQ1Q96JM4 1722 aa38.79■■■■□ 3.8
COL13A1-214ENST00000522165 CHMP7Q8WUX9 453 aaPredicted RBP38.7■■■■□ 3.79
COL13A1-214ENST00000522165 MTUS2Q5JR59 1369 aa38.65■■■■□ 3.78
COL13A1-214ENST00000522165 DISP1Q96F81 1524 aa38.65■■■■□ 3.78
COL13A1-214ENST00000522165 CEP170Q5SW79 1584 aa38.64■■■■□ 3.78
COL13A1-214ENST00000522165 KIAA0556O60303 1618 aa38.64■■■■□ 3.78
COL13A1-214ENST00000522165 HECW1Q76N89 1606 aa38.64■■■■□ 3.78
COL13A1-214ENST00000522165 CCDC18Q5T9S5 1454 aa38.63■■■■□ 3.77
COL13A1-214ENST00000522165 NUP160Q12769 1436 aa38.57■■■■□ 3.77
COL13A1-214ENST00000522165 ITGAEP38570 1179 aa38.57■■■■□ 3.76
COL13A1-214ENST00000522165 EHBP1L1Q8N3D4 1523 aa38.56■■■■□ 3.76
COL13A1-214ENST00000522165 FBLN2P98095 1184 aa38.55■■■■□ 3.76
COL13A1-214ENST00000522165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.53■■■■□ 3.76
COL13A1-214ENST00000522165 FAM50AQ14320 339 aaKnown RBP38.51■■■■□ 3.76
COL13A1-214ENST00000522165 EPRSP07814 1512 aaKnown RBP38.51■■■■□ 3.76
COL13A1-214ENST00000522165 DHX57Q6P158 1386 aaKnown RBP38.49■■■■□ 3.75
COL13A1-214ENST00000522165 SUPT6HQ7KZ85 1726 aaKnown RBP38.49■■■■□ 3.75
COL13A1-214ENST00000522165 NCOA2Q15596 1464 aa38.48■■■■□ 3.75
COL13A1-214ENST00000522165 FGD6Q6ZV73 1430 aa38.48■■■■□ 3.75
COL13A1-214ENST00000522165 MAGI3Q5TCQ9 1506 aa38.48■■■■□ 3.75
COL13A1-214ENST00000522165 CLSPNQ9HAW4 1339 aa38.44■■■■□ 3.74
COL13A1-214ENST00000522165 ARHGEF11O15085 1522 aa38.41■■■■□ 3.74
COL13A1-214ENST00000522165 CDK13Q14004 1512 aaKnown RBP38.4■■■■□ 3.74
COL13A1-214ENST00000522165 MYOM3Q5VTT5 1437 aa38.39■■■■□ 3.74
COL13A1-214ENST00000522165 RAB3GAP2Q9H2M9 1393 aa38.36■■■■□ 3.73
COL13A1-214ENST00000522165 JPH4Q96JJ6 628 aa38.35■■■■□ 3.73
COL13A1-214ENST00000522165 RAPGEF6Q8TEU7 1601 aa38.35■■■■□ 3.73
COL13A1-214ENST00000522165 SETD5Q9C0A6 1442 aa38.35■■■■□ 3.73
COL13A1-214ENST00000522165 CARMIL2Q6F5E8 1435 aa38.32■■■■□ 3.72
COL13A1-214ENST00000522165 NUP153P49790 1475 aaKnown RBP38.31■■■■□ 3.72
COL13A1-214ENST00000522165 ARID3CA6NKF2 412 aa38.23■■■■□ 3.71
COL13A1-214ENST00000522165 PTPN23Q9H3S7 1636 aa38.2■■■■□ 3.71
COL13A1-214ENST00000522165 CHD1O14646 1710 aa38.17■■■■□ 3.7
COL13A1-214ENST00000522165 PLB1Q6P1J6 1458 aa38.16■■■■□ 3.7
COL13A1-214ENST00000522165 TCOF1Q13428 1488 aaKnown RBP38.14■■■■□ 3.7
COL13A1-214ENST00000522165 PTPRKQ15262 1439 aa38.12■■■■□ 3.69
COL13A1-214ENST00000522165 MIA2Q96PC5 1412 aa38.09■■■■□ 3.69
COL13A1-214ENST00000522165 CDK11AQ9UQ88 783 aaPredicted RBP38.08■■■■□ 3.69
COL13A1-214ENST00000522165 MAPKBP1O60336 1514 aa38.04■■■■□ 3.68
COL13A1-214ENST00000522165 ABCA8O94911 1581 aa38.03■■■■□ 3.68
COL13A1-214ENST00000522165 PRG4Q92954 1404 aaPredicted RBP38.02■■■■□ 3.68
COL13A1-214ENST00000522165 HFM1A2PYH4 1435 aa38.02■■■■□ 3.68
COL13A1-214ENST00000522165 ZNF316A6NFI3 1004 aaPredicted RBP37.99■■■■□ 3.67
COL13A1-214ENST00000522165 TROQ12816 1431 aaPredicted RBP37.98■■■■□ 3.67
COL13A1-214ENST00000522165 SHROOM2Q13796 1616 aa37.93■■■■□ 3.66
COL13A1-214ENST00000522165 NAIPQ13075 1403 aa37.91■■■■□ 3.66
COL13A1-214ENST00000522165 ADCY10Q96PN6 1610 aa37.88■■■■□ 3.65
COL13A1-214ENST00000522165 PTPRGP23470 1445 aa37.87■■■■□ 3.65
COL13A1-214ENST00000522165 ATP10BO94823 1461 aa37.84■■■■□ 3.65
COL13A1-214ENST00000522165 DIEXFQ68CQ4 756 aaKnown RBP37.83■■■■□ 3.65
COL13A1-214ENST00000522165 AKNAQ7Z591 1439 aa37.81■■■■□ 3.64
COL13A1-214ENST00000522165 KIF14Q15058 1648 aa37.8■■■■□ 3.64
COL13A1-214ENST00000522165 UACAQ9BZF9 1416 aa37.77■■■■□ 3.64
COL13A1-214ENST00000522165 GCC2Q8IWJ2 1684 aa37.76■■■■□ 3.64
COL13A1-214ENST00000522165 ITSN2Q9NZM3 1697 aa37.76■■■■□ 3.64
COL13A1-214ENST00000522165 CHIC2Q9UKJ5 165 aa37.74■■■■□ 3.63
COL13A1-214ENST00000522165 PLEKHD1A6NEE1 506 aa37.73■■■■□ 3.63
COL13A1-214ENST00000522165 GPATCH8Q9UKJ3 1502 aaKnown RBP37.73■■■■□ 3.63
COL13A1-214ENST00000522165 DNMT1P26358 1616 aaKnown RBP37.73■■■■□ 3.63
COL13A1-214ENST00000522165 DAPK1P53355 1430 aa37.72■■■■□ 3.63
COL13A1-214ENST00000522165 RRP7BPQ9NSQ0 103 aa37.72■■■■□ 3.63
COL13A1-214ENST00000522165 CLASP1Q7Z460 1538 aa37.71■■■■□ 3.63
COL13A1-214ENST00000522165 ZNF644Q9H582 1327 aaPredicted RBP37.7■■■■□ 3.63
COL13A1-214ENST00000522165 ABCC5O15440 1437 aa37.68■■■■□ 3.62
COL13A1-214ENST00000522165 ERCC6L2Q5T890 1561 aa37.67■■■■□ 3.62
COL13A1-214ENST00000522165 CFDP1Q9UEE9 299 aaPredicted RBP37.66■■■■□ 3.62
COL13A1-214ENST00000522165 CAMSAP2Q08AD1 1489 aa37.64■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms