RNA–Protein interactions for RNA: ENST00000518646.5

EFCAB13-206, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 5

Gene EFCAB13, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-206ENST00000518646 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
EFCAB13-206ENST00000518646 PABPN1Q86U42 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
EFCAB13-206ENST00000518646 CFAP44Q96MT7 982 aa10.5□□□□□ -0.73
EFCAB13-206ENST00000518646 PROM2Q8N271 834 aa10.49□□□□□ -0.73
EFCAB13-206ENST00000518646 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
EFCAB13-206ENST00000518646 TULP1O00294 542 aaPredicted RBP10.48□□□□□ -0.73
EFCAB13-206ENST00000518646 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
EFCAB13-206ENST00000518646 CECR2Q9BXF3 1484 aa10.47□□□□□ -0.73
EFCAB13-206ENST00000518646 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
EFCAB13-206ENST00000518646 CLCN6P51797 869 aa10.45□□□□□ -0.74
EFCAB13-206ENST00000518646 RB1CC1Q8TDY2 1594 aa10.43□□□□□ -0.74
EFCAB13-206ENST00000518646 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
EFCAB13-206ENST00000518646 ARXQ96QS3 562 aa10.42□□□□□ -0.74
EFCAB13-206ENST00000518646 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
EFCAB13-206ENST00000518646 SPDYE1Q8NFV5 336 aaPredicted RBP10.39□□□□□ -0.75
EFCAB13-206ENST00000518646 CCDC180Q9P1Z9 1646 aa10.39□□□□□ -0.75
EFCAB13-206ENST00000518646 ECM2O94769 699 aaPredicted RBP10.37□□□□□ -0.75
EFCAB13-206ENST00000518646 TSHZ2Q9NRE2 1034 aa10.37□□□□□ -0.75
EFCAB13-206ENST00000518646 GTF3C3Q9Y5Q9 886 aa10.37□□□□□ -0.75
EFCAB13-206ENST00000518646 CUX2O14529 1486 aa10.36□□□□□ -0.75
EFCAB13-206ENST00000518646 NBR1Q14596 966 aa10.35□□□□□ -0.75
EFCAB13-206ENST00000518646 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
EFCAB13-206ENST00000518646 MKRN4PQ13434 485 aaPredicted RBP10.34□□□□□ -0.75
EFCAB13-206ENST00000518646 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
EFCAB13-206ENST00000518646 CC2D2AQ9P2K1 1620 aa10.33□□□□□ -0.76
EFCAB13-206ENST00000518646 ERICH6Q7L0X2 663 aa10.31□□□□□ -0.76
EFCAB13-206ENST00000518646 SPOCK2Q92563 424 aa10.29□□□□□ -0.76
EFCAB13-206ENST00000518646 CDAN1Q8IWY9 1227 aa10.28□□□□□ -0.76
EFCAB13-206ENST00000518646 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
EFCAB13-206ENST00000518646 SPDYE2BA6NHP3 402 aa10.25□□□□□ -0.77
EFCAB13-206ENST00000518646 SPDYE6P0CI01 402 aa10.25□□□□□ -0.77
EFCAB13-206ENST00000518646 SPDYE2Q495Y8 402 aa10.25□□□□□ -0.77
EFCAB13-206ENST00000518646 RGL2O15211 777 aa10.23□□□□□ -0.77
EFCAB13-206ENST00000518646 POTEJP0CG39 1038 aa10.23□□□□□ -0.77
EFCAB13-206ENST00000518646 UNC13AQ9UPW8 1703 aa10.23□□□□□ -0.77
EFCAB13-206ENST00000518646 ILDR1Q86SU0 546 aaPredicted RBP10.2□□□□□ -0.78
EFCAB13-206ENST00000518646 HOMEZQ8IX15 550 aa10.2□□□□□ -0.78
EFCAB13-206ENST00000518646 GALR2O43603 387 aaPredicted RBP10.19□□□□□ -0.78
EFCAB13-206ENST00000518646 BICRAQ9NZM4 1560 aa10.18□□□□□ -0.78
EFCAB13-206ENST00000518646 MMRN1Q13201 1228 aa10.18□□□□□ -0.78
EFCAB13-206ENST00000518646 ZNF579Q8NAF0 562 aaKnown RBP10.18□□□□□ -0.78
EFCAB13-206ENST00000518646 TMEM132AQ24JP5 1023 aa10.16□□□□□ -0.78
EFCAB13-206ENST00000518646 CHGAP10645 457 aaKnown RBP10.15□□□□□ -0.78
EFCAB13-206ENST00000518646 PELP1Q8IZL8 1130 aaKnown RBP10.15□□□□□ -0.78
EFCAB13-206ENST00000518646 FARP1Q9Y4F1 1045 aaPredicted RBP10.14□□□□□ -0.79
EFCAB13-206ENST00000518646 C14orf37Q86TY3 774 aa10.11□□□□□ -0.79
EFCAB13-206ENST00000518646 PRR29P0C7W0 189 aa10.1□□□□□ -0.79
EFCAB13-206ENST00000518646 NACADO15069 1562 aa10.09□□□□□ -0.79
EFCAB13-206ENST00000518646 MAMSTRQ6ZN01 415 aa10.09□□□□□ -0.79
EFCAB13-206ENST00000518646 SPNS2Q8IVW8 549 aa10.07□□□□□ -0.8
EFCAB13-206ENST00000518646 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
EFCAB13-206ENST00000518646 PLCD3Q8N3E9 789 aa10.04□□□□□ -0.8
EFCAB13-206ENST00000518646 EIF4G1Q04637 1599 aaKnown RBP10.03□□□□□ -0.8
EFCAB13-206ENST00000518646 METRNQ9UJH8 293 aa10.02□□□□□ -0.81
EFCAB13-206ENST00000518646 SSUH2Q9Y2M2 353 aa10.01□□□□□ -0.81
EFCAB13-206ENST00000518646 STAG3Q9UJ98 1225 aa10□□□□□ -0.81
EFCAB13-206ENST00000518646 CIZ1Q9ULV3 898 aaPredicted RBP10□□□□□ -0.81
EFCAB13-206ENST00000518646 ERCC6Q03468 1493 aa9.99□□□□□ -0.81
EFCAB13-206ENST00000518646 HS6ST3Q8IZP7 471 aa9.98□□□□□ -0.81
EFCAB13-206ENST00000518646 SCUBE2Q9NQ36 999 aa9.96□□□□□ -0.82
EFCAB13-206ENST00000518646 MIER1Q8N108 512 aa9.93□□□□□ -0.82
EFCAB13-206ENST00000518646 ZNF692Q9BU19 519 aaPredicted RBP9.93□□□□□ -0.82
EFCAB13-206ENST00000518646 C7P10643 843 aa9.92□□□□□ -0.82
EFCAB13-206ENST00000518646 SLC39A7Q92504 469 aa9.91□□□□□ -0.82
EFCAB13-206ENST00000518646 SHROOM4Q9ULL8 1493 aa9.91□□□□□ -0.82
EFCAB13-206ENST00000518646 ASTLQ6HA08 431 aaPredicted RBP9.86□□□□□ -0.83
EFCAB13-206ENST00000518646 NKX1-1Q15270 411 aaPredicted RBP9.84□□□□□ -0.83
EFCAB13-206ENST00000518646 GTPBP6O43824 516 aaPredicted RBP9.83□□□□□ -0.84
EFCAB13-206ENST00000518646 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
EFCAB13-206ENST00000518646 PHF12Q96QT6 1004 aa9.82□□□□□ -0.84
EFCAB13-206ENST00000518646 SUPT5HO00267 1087 aaKnown RBP9.81□□□□□ -0.84
EFCAB13-206ENST00000518646 ATMINO43313 823 aaPredicted RBP9.81□□□□□ -0.84
EFCAB13-206ENST00000518646 ST18O60284 1047 aa9.8□□□□□ -0.84
EFCAB13-206ENST00000518646 PLEKHG5O94827 1062 aa9.8□□□□□ -0.84
EFCAB13-206ENST00000518646 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
EFCAB13-206ENST00000518646 RANGAP1P46060 587 aaPredicted RBP9.78□□□□□ -0.84
EFCAB13-206ENST00000518646 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
EFCAB13-206ENST00000518646 P3H3Q8IVL6 736 aa9.76□□□□□ -0.85
EFCAB13-206ENST00000518646 BRPF1P55201 1214 aaPredicted RBP9.75□□□□□ -0.85
EFCAB13-206ENST00000518646 LMOD2Q6P5Q4 547 aa9.75□□□□□ -0.85
EFCAB13-206ENST00000518646 POTEFA5A3E0 1075 aa9.74□□□□□ -0.85
EFCAB13-206ENST00000518646 RIOK3O14730 519 aaKnown RBP9.71□□□□□ -0.86
EFCAB13-206ENST00000518646 RIMBP3CA6NJZ7 1639 aa9.71□□□□□ -0.86
EFCAB13-206ENST00000518646 RIMBP3BA6NNM3 1639 aa9.71□□□□□ -0.86
EFCAB13-206ENST00000518646 RIMBP3Q9UFD9 1639 aa9.71□□□□□ -0.86
EFCAB13-206ENST00000518646 STK25O00506 426 aa9.7□□□□□ -0.86
EFCAB13-206ENST00000518646 GSE1Q14687 1217 aa9.7□□□□□ -0.86
EFCAB13-206ENST00000518646 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.7□□□□□ -0.86
EFCAB13-206ENST00000518646 THOC2Q8NI27 1593 aaKnown RBP9.68□□□□□ -0.86
EFCAB13-206ENST00000518646 BAZ1AQ9NRL2 1556 aaPredicted RBP9.66□□□□□ -0.86
EFCAB13-206ENST00000518646 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
EFCAB13-206ENST00000518646 MS4A3Q96HJ5 214 aa9.65□□□□□ -0.86
EFCAB13-206ENST00000518646 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
EFCAB13-206ENST00000518646 KCNV2Q8TDN2 545 aa9.63□□□□□ -0.87
EFCAB13-206ENST00000518646 VGFO15240 615 aaPredicted RBP9.62□□□□□ -0.87
EFCAB13-206ENST00000518646 ATN1P54259 1190 aaPredicted RBP9.62□□□□□ -0.87
EFCAB13-206ENST00000518646 WDR70Q9NW82 654 aa9.61□□□□□ -0.87
EFCAB13-206ENST00000518646 PAK3O75914 559 aaPredicted RBP9.6□□□□□ -0.87
EFCAB13-206ENST00000518646 UBTFP17480 764 aaKnown RBP9.59□□□□□ -0.87
EFCAB13-206ENST00000518646 DCAF8Q5TAQ9 597 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms