RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 C7P10643 843 aa11.06□□□□□ -0.64
CD47-205ENST00000517766 SCUBE2Q9NQ36 999 aa11.06□□□□□ -0.64
CD47-205ENST00000517766 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
CD47-205ENST00000517766 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
CD47-205ENST00000517766 SLC39A7Q92504 469 aa11.03□□□□□ -0.64
CD47-205ENST00000517766 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
CD47-205ENST00000517766 PABPN1Q86U42 306 aaKnown RBP eCLIP11□□□□□ -0.65
CD47-205ENST00000517766 ATMINO43313 823 aaPredicted RBP10.98□□□□□ -0.65
CD47-205ENST00000517766 FKBP8Q14318 412 aa10.98□□□□□ -0.65
CD47-205ENST00000517766 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
CD47-205ENST00000517766 ST18O60284 1047 aa10.88□□□□□ -0.67
CD47-205ENST00000517766 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
CD47-205ENST00000517766 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
CD47-205ENST00000517766 CREBZFQ9NS37 354 aa10.81□□□□□ -0.68
CD47-205ENST00000517766 ATN1P54259 1190 aaPredicted RBP10.77□□□□□ -0.69
CD47-205ENST00000517766 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
CD47-205ENST00000517766 DCAF1Q9Y4B6 1507 aa10.73□□□□□ -0.69
CD47-205ENST00000517766 RTN4Q9NQC3 1192 aaKnown RBP10.64□□□□□ -0.71
CD47-205ENST00000517766 COLQQ9Y215 455 aaPredicted RBP10.63□□□□□ -0.71
CD47-205ENST00000517766 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
CD47-205ENST00000517766 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
CD47-205ENST00000517766 TMEM121BQ9BXQ6 578 aaPredicted RBP10.57□□□□□ -0.72
CD47-205ENST00000517766 MYO15BQ96JP2 1530 aa10.57□□□□□ -0.72
CD47-205ENST00000517766 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
CD47-205ENST00000517766 BMP2KQ9NSY1 1161 aaPredicted RBP10.56□□□□□ -0.72
CD47-205ENST00000517766 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
CD47-205ENST00000517766 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
CD47-205ENST00000517766 AMER1Q5JTC6 1135 aaPredicted RBP10.54□□□□□ -0.72
CD47-205ENST00000517766 MARVELD3Q96A59 401 aa10.54□□□□□ -0.72
CD47-205ENST00000517766 SHROOM4Q9ULL8 1493 aa10.52□□□□□ -0.73
CD47-205ENST00000517766 TRPC6Q9Y210 931 aa10.51□□□□□ -0.73
CD47-205ENST00000517766 MNX1P50219 401 aaPredicted RBP10.5□□□□□ -0.73
CD47-205ENST00000517766 NACADO15069 1562 aa10.47□□□□□ -0.73
CD47-205ENST00000517766 SEC24BO95487 1268 aa10.46□□□□□ -0.73
CD47-205ENST00000517766 ABCC9O60706 1549 aa10.46□□□□□ -0.74
CD47-205ENST00000517766 POTEB3A0JP26 581 aa10.44□□□□□ -0.74
CD47-205ENST00000517766 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
CD47-205ENST00000517766 POTEBQ6S5H4 581 aa10.44□□□□□ -0.74
CD47-205ENST00000517766 TIE1P35590 1138 aa10.39□□□□□ -0.75
CD47-205ENST00000517766 KIF12Q96FN5 646 aa10.37□□□□□ -0.75
CD47-205ENST00000517766 PROM2Q8N271 834 aa10.36□□□□□ -0.75
CD47-205ENST00000517766 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
CD47-205ENST00000517766 CCDC61Q9Y6R9 512 aa10.35□□□□□ -0.75
CD47-205ENST00000517766 RB1CC1Q8TDY2 1594 aa10.35□□□□□ -0.75
CD47-205ENST00000517766 STAG3Q9UJ98 1225 aa10.34□□□□□ -0.75
CD47-205ENST00000517766 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
CD47-205ENST00000517766 HS3ST6Q96QI5 342 aa10.32□□□□□ -0.76
CD47-205ENST00000517766 SCRIBQ14160 1630 aa10.32□□□□□ -0.76
CD47-205ENST00000517766 IER5LQ5T953 404 aa10.31□□□□□ -0.76
CD47-205ENST00000517766 SNPHO15079 494 aa10.3□□□□□ -0.76
CD47-205ENST00000517766 EMP3P54852 163 aa10.29□□□□□ -0.76
CD47-205ENST00000517766 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
CD47-205ENST00000517766 TSPYL2Q9H2G4 693 aaPredicted RBP10.28□□□□□ -0.76
CD47-205ENST00000517766 RNF166Q96A37 237 aaPredicted RBP10.26□□□□□ -0.77
CD47-205ENST00000517766 TRIM35Q9UPQ4 493 aa10.25□□□□□ -0.77
CD47-205ENST00000517766 FAM205CA6NFA0 338 aa10.23□□□□□ -0.77
CD47-205ENST00000517766 MAP3K13O43283 966 aa10.23□□□□□ -0.77
CD47-205ENST00000517766 IFNLR1Q8IU57 520 aaPredicted RBP10.21□□□□□ -0.77
CD47-205ENST00000517766 SUPT5HO00267 1087 aaKnown RBP10.2□□□□□ -0.78
CD47-205ENST00000517766 UNC13AQ9UPW8 1703 aa10.18□□□□□ -0.78
CD47-205ENST00000517766 SLC24A1O60721 1099 aa10.15□□□□□ -0.78
CD47-205ENST00000517766 PLCG2P16885 1265 aa10.1□□□□□ -0.79
CD47-205ENST00000517766 IRX5P78411 483 aaPredicted RBP10.1□□□□□ -0.79
CD47-205ENST00000517766 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.09□□□□□ -0.79
CD47-205ENST00000517766 KLHL34Q8N239 644 aa10.08□□□□□ -0.8
CD47-205ENST00000517766 MYT1LQ9UL68 1186 aa10.08□□□□□ -0.8
CD47-205ENST00000517766 PLCD3Q8N3E9 789 aa10.04□□□□□ -0.8
CD47-205ENST00000517766 RSF1Q96T23 1441 aaPredicted RBP10.03□□□□□ -0.8
CD47-205ENST00000517766 MIER1Q8N108 512 aa10.02□□□□□ -0.81
CD47-205ENST00000517766 BAZ1AQ9NRL2 1556 aaPredicted RBP10□□□□□ -0.81
CD47-205ENST00000517766 PKD2Q13563 968 aa9.99□□□□□ -0.81
CD47-205ENST00000517766 BICRAQ9NZM4 1560 aa9.98□□□□□ -0.81
CD47-205ENST00000517766 SPOCK2Q92563 424 aa9.98□□□□□ -0.81
CD47-205ENST00000517766 CECR2Q9BXF3 1484 aa9.98□□□□□ -0.81
CD47-205ENST00000517766 OCEL1Q9H607 264 aa9.95□□□□□ -0.82
CD47-205ENST00000517766 MROH2BQ7Z745 1585 aa9.95□□□□□ -0.82
CD47-205ENST00000517766 SMARCA4P51532 1647 aa9.93□□□□□ -0.82
CD47-205ENST00000517766 SGIP1Q9BQI5 828 aa9.92□□□□□ -0.82
CD47-205ENST00000517766 WIZO95785 1651 aa9.92□□□□□ -0.82
CD47-205ENST00000517766 TMEM106CQ9BVX2 250 aa9.91□□□□□ -0.82
CD47-205ENST00000517766 PCDHB13Q9Y5F0 798 aa9.89□□□□□ -0.83
CD47-205ENST00000517766 ECM2O94769 699 aaPredicted RBP9.88□□□□□ -0.83
CD47-205ENST00000517766 RASEFQ8IZ41 740 aa9.88□□□□□ -0.83
CD47-205ENST00000517766 IFNL1Q8IU54 200 aa9.86□□□□□ -0.83
CD47-205ENST00000517766 PLA2G2EQ9NZK7 142 aa9.86□□□□□ -0.83
CD47-205ENST00000517766 PLEKHG5O94827 1062 aa9.84□□□□□ -0.83
CD47-205ENST00000517766 CIZ1Q9ULV3 898 aaPredicted RBP9.84□□□□□ -0.83
CD47-205ENST00000517766 TOP2AP11388 1531 aaKnown RBP9.83□□□□□ -0.84
CD47-205ENST00000517766 PEG3Q9GZU2 1588 aa9.82□□□□□ -0.84
CD47-205ENST00000517766 ERBB3P21860 1342 aa9.81□□□□□ -0.84
CD47-205ENST00000517766 HOXB3P14651 431 aaPredicted RBP9.8□□□□□ -0.84
CD47-205ENST00000517766 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
CD47-205ENST00000517766 RGL2O15211 777 aa9.79□□□□□ -0.84
CD47-205ENST00000517766 PTGER2P43116 358 aa9.79□□□□□ -0.84
CD47-205ENST00000517766 C3orf67Q6ZVT6 689 aa9.79□□□□□ -0.84
CD47-205ENST00000517766 PLCB2Q00722 1185 aa9.78□□□□□ -0.84
CD47-205ENST00000517766 ZBTB47Q9UFB7 747 aaPredicted RBP9.77□□□□□ -0.85
CD47-205ENST00000517766 PDCD7Q8N8D1 485 aaKnown RBP9.75□□□□□ -0.85
CD47-205ENST00000517766 SMARCA2P51531 1590 aa9.75□□□□□ -0.85
CD47-205ENST00000517766 HAP1P54257 671 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms