RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 EFCAB5A4FU69 1503 aa40.48■■■■■ 4.07
COL13A1-210ENST00000517713 KANK4Q5T7N3 995 aaPredicted RBP40.44■■■■■ 4.06
COL13A1-210ENST00000517713 FHAD1B1AJZ9 1412 aa40.41■■■■■ 4.06
COL13A1-210ENST00000517713 THOC2Q8NI27 1593 aaKnown RBP40.4■■■■■ 4.06
COL13A1-210ENST00000517713 GRIN2BQ13224 1484 aa40.39■■■■■ 4.06
COL13A1-210ENST00000517713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.38■■■■■ 4.05
COL13A1-210ENST00000517713 P3H3Q8IVL6 736 aa40.38■■■■■ 4.05
COL13A1-210ENST00000517713 ZNF608Q9ULD9 1512 aaPredicted RBP40.35■■■■■ 4.05
COL13A1-210ENST00000517713 ADAMTS12P58397 1594 aa40.34■■■■■ 4.05
COL13A1-210ENST00000517713 MAP3K1Q13233 1512 aa40.34■■■■■ 4.05
COL13A1-210ENST00000517713 FHOD3Q2V2M9 1422 aa40.33■■■■■ 4.05
COL13A1-210ENST00000517713 CCER1Q8TC90 406 aaPredicted RBP40.29■■■■■ 4.04
COL13A1-210ENST00000517713 TIAM1Q13009 1591 aa40.29■■■■■ 4.04
COL13A1-210ENST00000517713 PCF11O94913 1555 aaKnown RBP40.26■■■■■ 4.03
COL13A1-210ENST00000517713 SAMD9Q5K651 1589 aa40.23■■■■■ 4.03
COL13A1-210ENST00000517713 HNRNPUL2Q1KMD3 747 aaKnown RBP40.21■■■■■ 4.03
COL13A1-210ENST00000517713 EIF4G3O43432 1585 aaKnown RBP40.18■■■■■ 4.02
COL13A1-210ENST00000517713 FYCO1Q9BQS8 1478 aa40.17■■■■■ 4.02
COL13A1-210ENST00000517713 FMN1Q68DA7 1419 aa40.15■■■■■ 4.02
COL13A1-210ENST00000517713 CASKIN1Q8WXD9 1431 aa40.15■■■■■ 4.02
COL13A1-210ENST00000517713 CFAP43Q8NDM7 1665 aa40.13■■■■■ 4.02
COL13A1-210ENST00000517713 LRRC9Q6ZRR7 1453 aa40.11■■■■■ 4.01
COL13A1-210ENST00000517713 RRBP1Q9P2E9 1410 aaKnown RBP40.11■■■■■ 4.01
COL13A1-210ENST00000517713 SNAPC4Q5SXM2 1469 aa40.08■■■■■ 4.01
COL13A1-210ENST00000517713 ATP1B4Q9UN42 357 aaPredicted RBP40.06■■■■■ 4
COL13A1-210ENST00000517713 IQGAP2Q13576 1575 aa40.06■■■■■ 4
COL13A1-210ENST00000517713 CCNB3Q8WWL7 1395 aa39.95■■■■□ 3.99
COL13A1-210ENST00000517713 MAGI1Q96QZ7 1491 aaPredicted RBP39.95■■■■□ 3.99
COL13A1-210ENST00000517713 GRIN2AQ12879 1464 aa39.92■■■■□ 3.98
COL13A1-210ENST00000517713 KIAA0586Q9BVV6 1533 aa39.87■■■■□ 3.97
COL13A1-210ENST00000517713 UGGT2Q9NYU1 1516 aa39.86■■■■□ 3.97
COL13A1-210ENST00000517713 SYNJ2O15056 1496 aa39.82■■■■□ 3.96
COL13A1-210ENST00000517713 PHLDB1Q86UU1 1377 aa39.81■■■■□ 3.96
COL13A1-210ENST00000517713 LRRIQ1Q96JM4 1722 aa39.79■■■■□ 3.96
COL13A1-210ENST00000517713 CHMP7Q8WUX9 453 aaPredicted RBP39.77■■■■□ 3.96
COL13A1-210ENST00000517713 MTUS2Q5JR59 1369 aa39.67■■■■□ 3.94
COL13A1-210ENST00000517713 CEP170Q5SW79 1584 aa39.66■■■■□ 3.94
COL13A1-210ENST00000517713 HECW1Q76N89 1606 aa39.65■■■■□ 3.94
COL13A1-210ENST00000517713 KIAA0556O60303 1618 aa39.64■■■■□ 3.94
COL13A1-210ENST00000517713 DISP1Q96F81 1524 aa39.64■■■■□ 3.94
COL13A1-210ENST00000517713 CCDC18Q5T9S5 1454 aa39.63■■■■□ 3.94
COL13A1-210ENST00000517713 FBLN2P98095 1184 aa39.63■■■■□ 3.93
COL13A1-210ENST00000517713 ITGAEP38570 1179 aa39.6■■■■□ 3.93
COL13A1-210ENST00000517713 NUP160Q12769 1436 aa39.57■■■■□ 3.93
COL13A1-210ENST00000517713 EHBP1L1Q8N3D4 1523 aa39.55■■■■□ 3.92
COL13A1-210ENST00000517713 FAM50AQ14320 339 aaKnown RBP39.53■■■■□ 3.92
COL13A1-210ENST00000517713 EPRSP07814 1512 aaKnown RBP39.51■■■■□ 3.91
COL13A1-210ENST00000517713 SUPT6HQ7KZ85 1726 aaKnown RBP39.49■■■■□ 3.91
COL13A1-210ENST00000517713 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.49■■■■□ 3.91
COL13A1-210ENST00000517713 NCOA2Q15596 1464 aa39.46■■■■□ 3.91
COL13A1-210ENST00000517713 FGD6Q6ZV73 1430 aa39.45■■■■□ 3.91
COL13A1-210ENST00000517713 MAGI3Q5TCQ9 1506 aa39.45■■■■□ 3.91
COL13A1-210ENST00000517713 DHX57Q6P158 1386 aaKnown RBP39.44■■■■□ 3.9
COL13A1-210ENST00000517713 CLSPNQ9HAW4 1339 aa39.39■■■■□ 3.9
COL13A1-210ENST00000517713 CDK13Q14004 1512 aaKnown RBP39.39■■■■□ 3.9
COL13A1-210ENST00000517713 JPH4Q96JJ6 628 aa39.38■■■■□ 3.9
COL13A1-210ENST00000517713 MYOM3Q5VTT5 1437 aa39.37■■■■□ 3.89
COL13A1-210ENST00000517713 ARHGEF11O15085 1522 aa39.37■■■■□ 3.89
COL13A1-210ENST00000517713 RAPGEF6Q8TEU7 1601 aa39.36■■■■□ 3.89
COL13A1-210ENST00000517713 CARMIL2Q6F5E8 1435 aa39.35■■■■□ 3.89
COL13A1-210ENST00000517713 RAB3GAP2Q9H2M9 1393 aa39.33■■■■□ 3.89
COL13A1-210ENST00000517713 SETD5Q9C0A6 1442 aa39.32■■■■□ 3.89
COL13A1-210ENST00000517713 NUP153P49790 1475 aaKnown RBP39.3■■■■□ 3.88
COL13A1-210ENST00000517713 ARID3CA6NKF2 412 aa39.26■■■■□ 3.88
COL13A1-210ENST00000517713 CHD1O14646 1710 aa39.2■■■■□ 3.87
COL13A1-210ENST00000517713 PTPN23Q9H3S7 1636 aa39.19■■■■□ 3.86
COL13A1-210ENST00000517713 PLB1Q6P1J6 1458 aa39.16■■■■□ 3.86
COL13A1-210ENST00000517713 CDK11AQ9UQ88 783 aaPredicted RBP39.11■■■■□ 3.85
COL13A1-210ENST00000517713 TCOF1Q13428 1488 aaKnown RBP39.1■■■■□ 3.85
COL13A1-210ENST00000517713 PTPRKQ15262 1439 aa39.07■■■■□ 3.84
COL13A1-210ENST00000517713 MIA2Q96PC5 1412 aa39.06■■■■□ 3.84
COL13A1-210ENST00000517713 PRG4Q92954 1404 aaPredicted RBP39.04■■■■□ 3.84
COL13A1-210ENST00000517713 ABCA8O94911 1581 aa39.01■■■■□ 3.84
COL13A1-210ENST00000517713 HFM1A2PYH4 1435 aa38.97■■■■□ 3.83
COL13A1-210ENST00000517713 TROQ12816 1431 aaPredicted RBP38.97■■■■□ 3.83
COL13A1-210ENST00000517713 MAPKBP1O60336 1514 aa38.97■■■■□ 3.83
COL13A1-210ENST00000517713 ZNF316A6NFI3 1004 aaPredicted RBP38.94■■■■□ 3.82
COL13A1-210ENST00000517713 SHROOM2Q13796 1616 aa38.92■■■■□ 3.82
COL13A1-210ENST00000517713 PTPRGP23470 1445 aa38.89■■■■□ 3.82
COL13A1-210ENST00000517713 NAIPQ13075 1403 aa38.87■■■■□ 3.81
COL13A1-210ENST00000517713 ADCY10Q96PN6 1610 aa38.86■■■■□ 3.81
COL13A1-210ENST00000517713 ATP10BO94823 1461 aa38.83■■■■□ 3.81
COL13A1-210ENST00000517713 KIF14Q15058 1648 aa38.78■■■■□ 3.8
COL13A1-210ENST00000517713 DIEXFQ68CQ4 756 aaKnown RBP38.77■■■■□ 3.8
COL13A1-210ENST00000517713 PLEKHD1A6NEE1 506 aa38.76■■■■□ 3.8
COL13A1-210ENST00000517713 ITSN2Q9NZM3 1697 aa38.75■■■■□ 3.79
COL13A1-210ENST00000517713 AKNAQ7Z591 1439 aa38.75■■■■□ 3.79
COL13A1-210ENST00000517713 CHIC2Q9UKJ5 165 aa38.74■■■■□ 3.79
COL13A1-210ENST00000517713 GCC2Q8IWJ2 1684 aa38.73■■■■□ 3.79
COL13A1-210ENST00000517713 UACAQ9BZF9 1416 aa38.72■■■■□ 3.79
COL13A1-210ENST00000517713 RRP7BPQ9NSQ0 103 aa38.7■■■■□ 3.79
COL13A1-210ENST00000517713 CLASP1Q7Z460 1538 aa38.7■■■■□ 3.79
COL13A1-210ENST00000517713 GPATCH8Q9UKJ3 1502 aaKnown RBP38.7■■■■□ 3.79
COL13A1-210ENST00000517713 DNMT1P26358 1616 aaKnown RBP38.69■■■■□ 3.78
COL13A1-210ENST00000517713 DAPK1P53355 1430 aa38.69■■■■□ 3.78
COL13A1-210ENST00000517713 ZNF644Q9H582 1327 aaPredicted RBP38.68■■■■□ 3.78
COL13A1-210ENST00000517713 ERCC6L2Q5T890 1561 aa38.67■■■■□ 3.78
COL13A1-210ENST00000517713 CFDP1Q9UEE9 299 aaPredicted RBP38.66■■■■□ 3.78
COL13A1-210ENST00000517713 ABCC5O15440 1437 aa38.63■■■■□ 3.78
COL13A1-210ENST00000517713 CAMSAP2Q08AD1 1489 aa38.62■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms