RNA–Protein interactions for RNA: ENST00000517570.5

MTCL1-205, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTCL1, Length 6,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-205ENST00000517570 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
MTCL1-205ENST00000517570 EIF4G2P78344 907 aaKnown RBP eCLIP21.98■■□□□ 1.11
MTCL1-205ENST00000517570 GOLGA6L22H0YM25 854 aa21.98■■□□□ 1.11
MTCL1-205ENST00000517570 NAP1L5Q96NT1 182 aaPredicted RBP21.97■■□□□ 1.11
MTCL1-205ENST00000517570 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
MTCL1-205ENST00000517570 TNNT2P45379 298 aaPredicted RBP21.96■■□□□ 1.11
MTCL1-205ENST00000517570 PTMAP06454 111 aaKnown RBP21.95■■□□□ 1.1
MTCL1-205ENST00000517570 PPM1GO15355 546 aaPredicted RBP21.93■■□□□ 1.1
MTCL1-205ENST00000517570 TPRNQ4KMQ1 711 aa21.92■■□□□ 1.1
MTCL1-205ENST00000517570 MYO15BQ96JP2 1530 aa21.92■■□□□ 1.1
MTCL1-205ENST00000517570 NOP58Q9Y2X3 529 aaKnown RBP21.91■■□□□ 1.1
MTCL1-205ENST00000517570 DNTTIP2Q5QJE6 756 aaKnown RBP21.9■■□□□ 1.1
MTCL1-205ENST00000517570 CDK11BP21127 795 aaKnown RBP21.9■■□□□ 1.1
MTCL1-205ENST00000517570 ZCCHC6Q5VYS8 1495 aaKnown RBP21.88■■□□□ 1.09
MTCL1-205ENST00000517570 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
MTCL1-205ENST00000517570 ERICH6BQ5W0A0 696 aa21.87■■□□□ 1.09
MTCL1-205ENST00000517570 RRP7BPQ9NSQ0 103 aa21.85■■□□□ 1.09
MTCL1-205ENST00000517570 MTUS2Q5JR59 1369 aa21.85■■□□□ 1.09
MTCL1-205ENST00000517570 CLIP1P30622 1438 aa21.82■■□□□ 1.08
MTCL1-205ENST00000517570 PPP4R2Q9NY27 417 aa21.82■■□□□ 1.08
MTCL1-205ENST00000517570 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
MTCL1-205ENST00000517570 TSPY4P0CV99 314 aa21.78■■□□□ 1.08
MTCL1-205ENST00000517570 TSPY10P0CW01 314 aa21.78■■□□□ 1.08
MTCL1-205ENST00000517570 CASC1Q6TDU7 716 aa21.77■■□□□ 1.08
MTCL1-205ENST00000517570 ZBTB7CA1YPR0 619 aa21.76■■□□□ 1.07
MTCL1-205ENST00000517570 RGS3P49796 1198 aa21.74■■□□□ 1.07
MTCL1-205ENST00000517570 FTSJ3Q8IY81 847 aaKnown RBP21.74■■□□□ 1.07
MTCL1-205ENST00000517570 ZRSR1Q15695 479 aaKnown RBP21.73■■□□□ 1.07
MTCL1-205ENST00000517570 DEKP35659 375 aaKnown RBP21.72■■□□□ 1.07
MTCL1-205ENST00000517570 B4GALNT3Q6L9W6 998 aa21.7■■□□□ 1.06
MTCL1-205ENST00000517570 CEP162Q5TB80 1403 aa21.69■■□□□ 1.06
MTCL1-205ENST00000517570 PLCB2Q00722 1185 aa21.68■■□□□ 1.06
MTCL1-205ENST00000517570 HSP90AB1P08238 724 aaKnown RBP21.67■■□□□ 1.06
MTCL1-205ENST00000517570 PLEKHG5O94827 1062 aa21.66■■□□□ 1.06
MTCL1-205ENST00000517570 RGL3Q3MIN7 710 aa21.65■■□□□ 1.06
MTCL1-205ENST00000517570 CFAP53Q96M91 514 aa21.65■■□□□ 1.06
MTCL1-205ENST00000517570 KNSTRNQ9Y448 316 aa21.65■■□□□ 1.06
MTCL1-205ENST00000517570 NPM1P06748 294 aaKnown RBP eCLIP21.63■■□□□ 1.05
MTCL1-205ENST00000517570 A0A0G2JS52 829 aa21.63■■□□□ 1.05
MTCL1-205ENST00000517570 NEUROD2Q15784 382 aa21.63■■□□□ 1.05
MTCL1-205ENST00000517570 GOLGA3Q08378 1498 aa21.63■■□□□ 1.05
MTCL1-205ENST00000517570 FRAT1Q92837 279 aaPredicted RBP21.61■■□□□ 1.05
MTCL1-205ENST00000517570 C14orf37Q86TY3 774 aa21.61■■□□□ 1.05
MTCL1-205ENST00000517570 CARD11Q9BXL7 1154 aa21.59■■□□□ 1.05
MTCL1-205ENST00000517570 RBM19Q9Y4C8 960 aaKnown RBP21.57■■□□□ 1.04
MTCL1-205ENST00000517570 SIN3AQ96ST3 1273 aa21.57■■□□□ 1.04
MTCL1-205ENST00000517570 SPRYD3Q8NCJ5 442 aa21.56■■□□□ 1.04
MTCL1-205ENST00000517570 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
MTCL1-205ENST00000517570 TAOK2Q9UL54 1235 aa21.55■■□□□ 1.04
MTCL1-205ENST00000517570 CC2D1BQ5T0F9 858 aaKnown RBP21.54■■□□□ 1.04
MTCL1-205ENST00000517570 L1TD1Q5T7N2 865 aaKnown RBP21.53■■□□□ 1.04
MTCL1-205ENST00000517570 GOLGA6L6A8MZA4 724 aa21.53■■□□□ 1.04
MTCL1-205ENST00000517570 ARID4BQ4LE39 1312 aaPredicted RBP21.52■■□□□ 1.04
MTCL1-205ENST00000517570 MSNP26038 577 aaKnown RBP21.51■■□□□ 1.03
MTCL1-205ENST00000517570 AMER1Q5JTC6 1135 aaPredicted RBP21.51■■□□□ 1.03
MTCL1-205ENST00000517570 MAPK8IP3Q9UPT6 1336 aa21.51■■□□□ 1.03
MTCL1-205ENST00000517570 TULP1O00294 542 aaPredicted RBP21.51■■□□□ 1.03
MTCL1-205ENST00000517570 CDCA8Q53HL2 280 aa21.51■■□□□ 1.03
MTCL1-205ENST00000517570 HSCBQ8IWL3 235 aa21.51■■□□□ 1.03
MTCL1-205ENST00000517570 PPP1R15AO75807 674 aaPredicted RBP21.49■■□□□ 1.03
MTCL1-205ENST00000517570 CHAF1AQ13111 956 aaPredicted RBP21.45■■□□□ 1.02
MTCL1-205ENST00000517570 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.43■■□□□ 1.02
MTCL1-205ENST00000517570 KCNH8Q96L42 1107 aa21.42■■□□□ 1.02
MTCL1-205ENST00000517570 CHMP7Q8WUX9 453 aaPredicted RBP21.41■■□□□ 1.02
MTCL1-205ENST00000517570 EEA1Q15075 1411 aa21.4■■□□□ 1.02
MTCL1-205ENST00000517570 NUDCQ9Y266 331 aa21.39■■□□□ 1.02
MTCL1-205ENST00000517570 OS9Q13438 667 aaPredicted RBP21.39■■□□□ 1.01
MTCL1-205ENST00000517570 NAP1L2Q9ULW6 460 aaPredicted RBP21.39■■□□□ 1.01
MTCL1-205ENST00000517570 DRC7Q8IY82 874 aa21.37■■□□□ 1.01
MTCL1-205ENST00000517570 MS4A1P11836 297 aa21.37■■□□□ 1.01
MTCL1-205ENST00000517570 FGD1P98174 961 aa21.37■■□□□ 1.01
MTCL1-205ENST00000517570 CHMP4BQ9H444 224 aaKnown RBP21.36■■□□□ 1.01
MTCL1-205ENST00000517570 ARID3AQ99856 593 aa21.36■■□□□ 1.01
MTCL1-205ENST00000517570 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
MTCL1-205ENST00000517570 KCNJ4P48050 445 aa21.35■■□□□ 1.01
MTCL1-205ENST00000517570 U2SURPO15042 1029 aaKnown RBP21.35■■□□□ 1.01
MTCL1-205ENST00000517570 GOLGA6L4A6NEF3 574 aa21.34■■□□□ 1.01
MTCL1-205ENST00000517570 NRDCO43847 1150 aa21.34■■□□□ 1.01
MTCL1-205ENST00000517570 CCER2I3L3R5 266 aa21.34■■□□□ 1.01
MTCL1-205ENST00000517570 PLEKHD1A6NEE1 506 aa21.33■■□□□ 1
MTCL1-205ENST00000517570 CFDP1Q9UEE9 299 aaPredicted RBP21.32■■□□□ 1
MTCL1-205ENST00000517570 GZF1Q9H116 711 aaPredicted RBP21.31■■□□□ 1
MTCL1-205ENST00000517570 TSHZ2Q9NRE2 1034 aa21.29■■□□□ 1
MTCL1-205ENST00000517570 CEP164Q9UPV0 1460 aa21.29■■□□□ 1
MTCL1-205ENST00000517570 MCCP23508 829 aa21.27■■□□□ 1
MTCL1-205ENST00000517570 TMF1P82094 1093 aa21.24■□□□□ 0.99
MTCL1-205ENST00000517570 POGKQ9P215 609 aa21.24■□□□□ 0.99
MTCL1-205ENST00000517570 HSPA5P11021 654 aaKnown RBP21.24■□□□□ 0.99
MTCL1-205ENST00000517570 SLKQ9H2G2 1235 aaPredicted RBP21.23■□□□□ 0.99
MTCL1-205ENST00000517570 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
MTCL1-205ENST00000517570 PNNQ9H307 717 aaKnown RBP21.22■□□□□ 0.99
MTCL1-205ENST00000517570 HAP1P54257 671 aaPredicted RBP21.22■□□□□ 0.99
MTCL1-205ENST00000517570 GBP4Q96PP9 640 aa21.21■□□□□ 0.99
MTCL1-205ENST00000517570 CCNB3Q8WWL7 1395 aa21.2■□□□□ 0.98
MTCL1-205ENST00000517570 DCAF11Q8TEB1 546 aa21.2■□□□□ 0.98
MTCL1-205ENST00000517570 PTMSP20962 102 aa21.2■□□□□ 0.98
MTCL1-205ENST00000517570 GOLGA6L3A6NEY3 463 aa21.16■□□□□ 0.98
MTCL1-205ENST00000517570 TCERG1O14776 1098 aaKnown RBP21.16■□□□□ 0.98
MTCL1-205ENST00000517570 APBB1O00213 710 aa21.16■□□□□ 0.98
MTCL1-205ENST00000517570 IPO9Q96P70 1041 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms