RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 TRIM26Q12899 539 aaPredicted RBP4.89□□□□□ -1.63
SCARNA11.3-201ENST00000517276 ZNF692Q9BU19 519 aaPredicted RBP4.89□□□□□ -1.63
SCARNA11.3-201ENST00000517276 NEUROD2Q15784 382 aa4.88□□□□□ -1.63
SCARNA11.3-201ENST00000517276 ABCB7O75027 752 aa4.87□□□□□ -1.63
SCARNA11.3-201ENST00000517276 CAPN15O75808 1086 aa4.87□□□□□ -1.63
SCARNA11.3-201ENST00000517276 KCNV2Q8TDN2 545 aa4.87□□□□□ -1.63
SCARNA11.3-201ENST00000517276 TRIM41Q8WV44 630 aa4.87□□□□□ -1.63
SCARNA11.3-201ENST00000517276 STK25O00506 426 aa4.86□□□□□ -1.63
SCARNA11.3-201ENST00000517276 PABPN1Q86U42 306 aaKnown RBP eCLIP4.86□□□□□ -1.63
SCARNA11.3-201ENST00000517276 RIOK3O14730 519 aaKnown RBP4.85□□□□□ -1.63
SCARNA11.3-201ENST00000517276 SLC24A3Q9HC58 644 aa4.85□□□□□ -1.63
SCARNA11.3-201ENST00000517276 HRCP23327 699 aa4.84□□□□□ -1.63
SCARNA11.3-201ENST00000517276 P3H3Q8IVL6 736 aa4.84□□□□□ -1.63
SCARNA11.3-201ENST00000517276 ZC3H15Q8WU90 426 aaKnown RBP4.84□□□□□ -1.63
SCARNA11.3-201ENST00000517276 NPM2Q86SE8 214 aaKnown RBP4.83□□□□□ -1.64
SCARNA11.3-201ENST00000517276 CADPS2Q86UW7 1296 aa4.83□□□□□ -1.64
SCARNA11.3-201ENST00000517276 OSCARQ8IYS5 282 aa4.83□□□□□ -1.64
SCARNA11.3-201ENST00000517276 SSUH2Q9Y2M2 353 aa4.83□□□□□ -1.64
SCARNA11.3-201ENST00000517276 ZBTB12Q9Y330 459 aaPredicted RBP4.83□□□□□ -1.64
SCARNA11.3-201ENST00000517276 PLEKHG5O94827 1062 aa4.82□□□□□ -1.64
SCARNA11.3-201ENST00000517276 ZBTB47Q9UFB7 747 aaPredicted RBP4.82□□□□□ -1.64
SCARNA11.3-201ENST00000517276 STK24Q9Y6E0 443 aa4.82□□□□□ -1.64
SCARNA11.3-201ENST00000517276 GSE1Q14687 1217 aa4.81□□□□□ -1.64
SCARNA11.3-201ENST00000517276 ARID3AQ99856 593 aa4.81□□□□□ -1.64
SCARNA11.3-201ENST00000517276 BCL11BQ9C0K0 894 aaPredicted RBP4.81□□□□□ -1.64
SCARNA11.3-201ENST00000517276 VGFO15240 615 aaPredicted RBP4.8□□□□□ -1.64
SCARNA11.3-201ENST00000517276 NUBP1P53384 320 aa4.8□□□□□ -1.64
SCARNA11.3-201ENST00000517276 DCAF8Q5TAQ9 597 aa4.8□□□□□ -1.64
SCARNA11.3-201ENST00000517276 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.79□□□□□ -1.64
SCARNA11.3-201ENST00000517276 SPDYE2BA6NHP3 402 aa4.79□□□□□ -1.64
SCARNA11.3-201ENST00000517276 SPDYE6P0CI01 402 aa4.79□□□□□ -1.64
SCARNA11.3-201ENST00000517276 SPDYE2Q495Y8 402 aa4.79□□□□□ -1.64
SCARNA11.3-201ENST00000517276 ZFP91Q96JP5 570 aaPredicted RBP4.79□□□□□ -1.64
SCARNA11.3-201ENST00000517276 WDR70Q9NW82 654 aa4.79□□□□□ -1.64
SCARNA11.3-201ENST00000517276 ZMYND15Q9H091 742 aa4.78□□□□□ -1.64
SCARNA11.3-201ENST00000517276 SEMA3EO15041 775 aa4.76□□□□□ -1.65
SCARNA11.3-201ENST00000517276 RSPH6AQ9H0K4 717 aa4.76□□□□□ -1.65
SCARNA11.3-201ENST00000517276 C1orf115Q9H7X2 142 aa4.76□□□□□ -1.65
SCARNA11.3-201ENST00000517276 GPBP1L1Q9HC44 474 aaPredicted RBP4.75□□□□□ -1.65
SCARNA11.3-201ENST00000517276 RYDENQ9NUL5 291 aaKnown RBP4.74□□□□□ -1.65
SCARNA11.3-201ENST00000517276 IL27Q8NEV9 243 aa4.73□□□□□ -1.65
SCARNA11.3-201ENST00000517276 SGIP1Q9BQI5 828 aa4.73□□□□□ -1.65
SCARNA11.3-201ENST00000517276 TESPA1A2RU30 521 aaPredicted RBP4.72□□□□□ -1.65
SCARNA11.3-201ENST00000517276 ARID3CA6NKF2 412 aa4.72□□□□□ -1.65
SCARNA11.3-201ENST00000517276 ZMYND10O75800 440 aa4.72□□□□□ -1.65
SCARNA11.3-201ENST00000517276 FAM212AQ96EL1 285 aa4.71□□□□□ -1.66
SCARNA11.3-201ENST00000517276 PYGBP11216 843 aa4.7□□□□□ -1.66
SCARNA11.3-201ENST00000517276 ARHGEF1Q92888 912 aaKnown RBP4.7□□□□□ -1.66
SCARNA11.3-201ENST00000517276 CHRM1P11229 460 aaPredicted RBP4.69□□□□□ -1.66
SCARNA11.3-201ENST00000517276 RASEFQ8IZ41 740 aa4.69□□□□□ -1.66
SCARNA11.3-201ENST00000517276 RNF39Q9H2S5 420 aa4.69□□□□□ -1.66
SCARNA11.3-201ENST00000517276 MKRN3Q13064 507 aaKnown RBP4.68□□□□□ -1.66
SCARNA11.3-201ENST00000517276 E2F4Q16254 413 aa4.68□□□□□ -1.66
SCARNA11.3-201ENST00000517276 BARGINQ6ZT62 677 aa4.68□□□□□ -1.66
SCARNA11.3-201ENST00000517276 APBB1O00213 710 aa4.67□□□□□ -1.66
SCARNA11.3-201ENST00000517276 NECTIN2Q92692 538 aa4.67□□□□□ -1.66
SCARNA11.3-201ENST00000517276 KDM4CQ9H3R0 1056 aa4.67□□□□□ -1.66
SCARNA11.3-201ENST00000517276 PPP1R37O75864 691 aa4.66□□□□□ -1.66
SCARNA11.3-201ENST00000517276 DSG3P32926 999 aa4.66□□□□□ -1.66
SCARNA11.3-201ENST00000517276 MNX1P50219 401 aaPredicted RBP4.65□□□□□ -1.67
SCARNA11.3-201ENST00000517276 AK7Q96M32 723 aa4.65□□□□□ -1.67
SCARNA11.3-201ENST00000517276 PDIA4P13667 645 aaKnown RBP4.64□□□□□ -1.67
SCARNA11.3-201ENST00000517276 MFRPQ9BY79 579 aa4.64□□□□□ -1.67
SCARNA11.3-201ENST00000517276 CREBZFQ9NS37 354 aa4.64□□□□□ -1.67
SCARNA11.3-201ENST00000517276 CCDC9Q9Y3X0 531 aaKnown RBP4.64□□□□□ -1.67
SCARNA11.3-201ENST00000517276 ZBTB7CA1YPR0 619 aa4.63□□□□□ -1.67
SCARNA11.3-201ENST00000517276 RBM26Q5T8P6 1007 aaKnown RBP4.63□□□□□ -1.67
SCARNA11.3-201ENST00000517276 KRI1Q8N9T8 703 aaKnown RBP4.63□□□□□ -1.67
SCARNA11.3-201ENST00000517276 TRIM66O15016 1216 aa4.62□□□□□ -1.67
SCARNA11.3-201ENST00000517276 PDE4DQ08499 809 aa4.62□□□□□ -1.67
SCARNA11.3-201ENST00000517276 C1QBPQ07021 282 aaKnown RBP4.61□□□□□ -1.67
SCARNA11.3-201ENST00000517276 SMYD5Q6GMV2 418 aa4.61□□□□□ -1.67
SCARNA11.3-201ENST00000517276 FAM117AQ9C073 453 aa4.61□□□□□ -1.67
SCARNA11.3-201ENST00000517276 ZNF316A6NFI3 1004 aaPredicted RBP4.6□□□□□ -1.67
SCARNA11.3-201ENST00000517276 MLLT3P42568 568 aaPredicted RBP4.6□□□□□ -1.67
SCARNA11.3-201ENST00000517276 GPIHBP1Q8IV16 184 aa4.6□□□□□ -1.67
SCARNA11.3-201ENST00000517276 CCDC82Q8N4S0 544 aa4.6□□□□□ -1.67
SCARNA11.3-201ENST00000517276 CLUAP1Q96AJ1 413 aa4.59□□□□□ -1.67
SCARNA11.3-201ENST00000517276 NCKAP5LQ9HCH0 1330 aa4.59□□□□□ -1.67
SCARNA11.3-201ENST00000517276 PCDHB8Q9UN66 801 aa4.59□□□□□ -1.67
SCARNA11.3-201ENST00000517276 PCDHB13Q9Y5F0 798 aa4.59□□□□□ -1.67
SCARNA11.3-201ENST00000517276 PLEKHG3A1L390 1219 aa4.58□□□□□ -1.68
SCARNA11.3-201ENST00000517276 LARP6Q9BRS8 491 aaKnown RBP4.58□□□□□ -1.68
SCARNA11.3-201ENST00000517276 LOC105371045A0A1W2PR82 267 aa4.57□□□□□ -1.68
SCARNA11.3-201ENST00000517276 PDAP1Q13442 181 aaKnown RBP4.57□□□□□ -1.68
SCARNA11.3-201ENST00000517276 FBXO22Q8NEZ5 403 aa4.57□□□□□ -1.68
SCARNA11.3-201ENST00000517276 CLEC11AQ9Y240 323 aa4.57□□□□□ -1.68
SCARNA11.3-201ENST00000517276 ZNF467Q7Z7K2 595 aaPredicted RBP4.56□□□□□ -1.68
SCARNA11.3-201ENST00000517276 KCTD17Q8N5Z5 321 aa4.56□□□□□ -1.68
SCARNA11.3-201ENST00000517276 PHF8Q9UPP1 1060 aa4.56□□□□□ -1.68
SCARNA11.3-201ENST00000517276 TRAK2O60296 914 aa4.55□□□□□ -1.68
SCARNA11.3-201ENST00000517276 ONECUT3O60422 494 aaPredicted RBP4.55□□□□□ -1.68
SCARNA11.3-201ENST00000517276 PRR29P0C7W0 189 aa4.55□□□□□ -1.68
SCARNA11.3-201ENST00000517276 PSEN1P49768 467 aa4.55□□□□□ -1.68
SCARNA11.3-201ENST00000517276 FLIIQ13045 1269 aa4.55□□□□□ -1.68
SCARNA11.3-201ENST00000517276 EFCAB3Q8N7B9 438 aa4.55□□□□□ -1.68
SCARNA11.3-201ENST00000517276 MFSD10Q14728 455 aa4.54□□□□□ -1.68
SCARNA11.3-201ENST00000517276 SPDYE1Q8NFV5 336 aaPredicted RBP4.54□□□□□ -1.68
SCARNA11.3-201ENST00000517276 TSPYL2Q9H2G4 693 aaPredicted RBP4.54□□□□□ -1.68
SCARNA11.3-201ENST00000517276 RAD21O60216 631 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms