RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 PCDHB8Q9UN66 801 aa1.59□□□□□ -2.15
RNU6-1049P-201ENST00000516414 PCDHB13Q9Y5F0 798 aa1.59□□□□□ -2.15
RNU6-1049P-201ENST00000516414 PYGBP11216 843 aa1.57□□□□□ -2.16
RNU6-1049P-201ENST00000516414 SPDYE1Q8NFV5 336 aaPredicted RBP1.57□□□□□ -2.16
RNU6-1049P-201ENST00000516414 ATMINO43313 823 aaPredicted RBP1.56□□□□□ -2.16
RNU6-1049P-201ENST00000516414 NUBP1P53384 320 aa1.56□□□□□ -2.16
RNU6-1049P-201ENST00000516414 IFNL1Q8IU54 200 aa1.56□□□□□ -2.16
RNU6-1049P-201ENST00000516414 IFNLR1Q8IU57 520 aaPredicted RBP1.56□□□□□ -2.16
RNU6-1049P-201ENST00000516414 MIER1Q8N108 512 aa1.56□□□□□ -2.16
RNU6-1049P-201ENST00000516414 KIF12Q96FN5 646 aa1.56□□□□□ -2.16
RNU6-1049P-201ENST00000516414 FAM163AQ96GL9 167 aaPredicted RBP1.56□□□□□ -2.16
RNU6-1049P-201ENST00000516414 PLSCR2Q9NRY7 297 aa1.56□□□□□ -2.16
RNU6-1049P-201ENST00000516414 BMP2KQ9NSY1 1161 aaPredicted RBP1.56□□□□□ -2.16
RNU6-1049P-201ENST00000516414 CCDC61Q9Y6R9 512 aa1.56□□□□□ -2.16
RNU6-1049P-201ENST00000516414 PROM2Q8N271 834 aa1.55□□□□□ -2.16
RNU6-1049P-201ENST00000516414 APLP2Q06481 763 aa1.54□□□□□ -2.16
RNU6-1049P-201ENST00000516414 KHSRPQ92945 711 aaKnown RBP eCLIP1.54□□□□□ -2.16
RNU6-1049P-201ENST00000516414 MARVELD3Q96A59 401 aa1.54□□□□□ -2.16
RNU6-1049P-201ENST00000516414 TMEM92Q6UXU6 159 aa1.53□□□□□ -2.16
RNU6-1049P-201ENST00000516414 RNF25Q96BH1 459 aaPredicted RBP1.53□□□□□ -2.16
RNU6-1049P-201ENST00000516414 TTLL13PA6NNM8 815 aa1.52□□□□□ -2.17
RNU6-1049P-201ENST00000516414 DCAF8Q5TAQ9 597 aa1.52□□□□□ -2.17
RNU6-1049P-201ENST00000516414 ZNF579Q8NAF0 562 aaKnown RBP1.52□□□□□ -2.17
RNU6-1049P-201ENST00000516414 DCBLD2Q96PD2 775 aa1.52□□□□□ -2.17
RNU6-1049P-201ENST00000516414 METRNQ9UJH8 293 aa1.52□□□□□ -2.17
RNU6-1049P-201ENST00000516414 ZBTB12Q9Y330 459 aaPredicted RBP1.52□□□□□ -2.17
RNU6-1049P-201ENST00000516414 POTEMA6NI47 508 aa1.51□□□□□ -2.17
RNU6-1049P-201ENST00000516414 PPP1R37O75864 691 aa1.51□□□□□ -2.17
RNU6-1049P-201ENST00000516414 POTEGQ6S5H5 508 aa1.51□□□□□ -2.17
RNU6-1049P-201ENST00000516414 POTEEQ6S8J3 1075 aa1.51□□□□□ -2.17
RNU6-1049P-201ENST00000516414 TRIM35Q9UPQ4 493 aa1.51□□□□□ -2.17
RNU6-1049P-201ENST00000516414 ST18O60284 1047 aa1.5□□□□□ -2.17
RNU6-1049P-201ENST00000516414 ASTLQ6HA08 431 aaPredicted RBP1.5□□□□□ -2.17
RNU6-1049P-201ENST00000516414 PLCD3Q8N3E9 789 aa1.5□□□□□ -2.17
RNU6-1049P-201ENST00000516414 MS4A4AQ96JQ5 239 aa1.5□□□□□ -2.17
RNU6-1049P-201ENST00000516414 TMEM106CQ9BVX2 250 aa1.5□□□□□ -2.17
RNU6-1049P-201ENST00000516414 NPM1P06748 294 aaKnown RBP eCLIP1.49□□□□□ -2.17
RNU6-1049P-201ENST00000516414 PDCD7Q8N8D1 485 aaKnown RBP1.49□□□□□ -2.17
RNU6-1049P-201ENST00000516414 CIZ1Q9ULV3 898 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1049P-201ENST00000516414 RGL2O15211 777 aa1.48□□□□□ -2.17
RNU6-1049P-201ENST00000516414 IRX5P78411 483 aaPredicted RBP1.48□□□□□ -2.17
RNU6-1049P-201ENST00000516414 KLHL34Q8N239 644 aa1.48□□□□□ -2.17
RNU6-1049P-201ENST00000516414 EFCAB3Q8N7B9 438 aa1.48□□□□□ -2.17
RNU6-1049P-201ENST00000516414 TRIM41Q8WV44 630 aa1.48□□□□□ -2.17
RNU6-1049P-201ENST00000516414 PHF8Q9UPP1 1060 aa1.48□□□□□ -2.17
RNU6-1049P-201ENST00000516414 VASPP50552 380 aaPredicted RBP1.47□□□□□ -2.17
RNU6-1049P-201ENST00000516414 PKD2Q13563 968 aa1.47□□□□□ -2.17
RNU6-1049P-201ENST00000516414 SLAIN1Q8ND83 568 aa1.47□□□□□ -2.17
RNU6-1049P-201ENST00000516414 KRTAP3-3Q9BYR6 98 aa1.47□□□□□ -2.17
RNU6-1049P-201ENST00000516414 KRTAP3-2Q9BYR7 98 aa1.47□□□□□ -2.17
RNU6-1049P-201ENST00000516414 CABP2Q9NPB3 220 aa1.47□□□□□ -2.17
RNU6-1049P-201ENST00000516414 AXIN2Q9Y2T1 843 aa1.47□□□□□ -2.17
RNU6-1049P-201ENST00000516414 HOXB3P14651 431 aaPredicted RBP1.46□□□□□ -2.18
RNU6-1049P-201ENST00000516414 PSEN1P49768 467 aa1.46□□□□□ -2.18
RNU6-1049P-201ENST00000516414 NKX1-1Q15270 411 aaPredicted RBP1.46□□□□□ -2.18
RNU6-1049P-201ENST00000516414 CDAN1Q8IWY9 1227 aa1.46□□□□□ -2.18
RNU6-1049P-201ENST00000516414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP1.45□□□□□ -2.18
RNU6-1049P-201ENST00000516414 FAM205CA6NFA0 338 aa1.45□□□□□ -2.18
RNU6-1049P-201ENST00000516414 ARSIQ5FYB1 569 aa1.45□□□□□ -2.18
RNU6-1049P-201ENST00000516414 CADPS2Q86UW7 1296 aa1.45□□□□□ -2.18
RNU6-1049P-201ENST00000516414 ZFP91Q96JP5 570 aaPredicted RBP1.45□□□□□ -2.18
RNU6-1049P-201ENST00000516414 C3orf80F5H4A9 247 aa1.44□□□□□ -2.18
RNU6-1049P-201ENST00000516414 SEC24BO95487 1268 aa1.44□□□□□ -2.18
RNU6-1049P-201ENST00000516414 SPNS2Q8IVW8 549 aa1.44□□□□□ -2.18
RNU6-1049P-201ENST00000516414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP1.44□□□□□ -2.18
RNU6-1049P-201ENST00000516414 C7P10643 843 aa1.43□□□□□ -2.18
RNU6-1049P-201ENST00000516414 SLC39A7Q92504 469 aa1.43□□□□□ -2.18
RNU6-1049P-201ENST00000516414 MFRPQ9BY79 579 aa1.43□□□□□ -2.18
RNU6-1049P-201ENST00000516414 STAG3Q9UJ98 1225 aa1.43□□□□□ -2.18
RNU6-1049P-201ENST00000516414 TIE1P35590 1138 aa1.42□□□□□ -2.18
RNU6-1049P-201ENST00000516414 PRIM1P49642 420 aaKnown RBP1.42□□□□□ -2.18
RNU6-1049P-201ENST00000516414 PSEN2P49810 448 aa1.42□□□□□ -2.18
RNU6-1049P-201ENST00000516414 MMRN1Q13201 1228 aa1.42□□□□□ -2.18
RNU6-1049P-201ENST00000516414 DMRTA1Q5VZB9 504 aa1.42□□□□□ -2.18
RNU6-1049P-201ENST00000516414 FBXO22Q8NEZ5 403 aa1.42□□□□□ -2.18
RNU6-1049P-201ENST00000516414 HS3ST6Q96QI5 342 aa1.42□□□□□ -2.18
RNU6-1049P-201ENST00000516414 OCEL1Q9H607 264 aa1.42□□□□□ -2.18
RNU6-1049P-201ENST00000516414 C2orf72A6NCS6 295 aa1.41□□□□□ -2.18
RNU6-1049P-201ENST00000516414 NUDT7P0C024 238 aa1.41□□□□□ -2.18
RNU6-1049P-201ENST00000516414 PLCG2P16885 1265 aa1.41□□□□□ -2.18
RNU6-1049P-201ENST00000516414 ILDR1Q86SU0 546 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1049P-201ENST00000516414 SPOCK2Q92563 424 aa1.41□□□□□ -2.18
RNU6-1049P-201ENST00000516414 BCL11BQ9C0K0 894 aaPredicted RBP1.41□□□□□ -2.18
RNU6-1049P-201ENST00000516414 STK24Q9Y6E0 443 aa1.41□□□□□ -2.18
RNU6-1049P-201ENST00000516414 PAK3O75914 559 aaPredicted RBP1.4□□□□□ -2.19
RNU6-1049P-201ENST00000516414 VARS2Q5ST30 1063 aaKnown RBP1.4□□□□□ -2.19
RNU6-1049P-201ENST00000516414 GPR153Q6NV75 609 aa1.4□□□□□ -2.19
RNU6-1049P-201ENST00000516414 MICALL2Q8IY33 904 aa1.4□□□□□ -2.19
RNU6-1049P-201ENST00000516414 UPF1Q92900 1129 aaKnown RBP eCLIP1.4□□□□□ -2.19
RNU6-1049P-201ENST00000516414 FAM212AQ96EL1 285 aa1.4□□□□□ -2.19
RNU6-1049P-201ENST00000516414 LHX6Q9UPM6 363 aa1.4□□□□□ -2.19
RNU6-1049P-201ENST00000516414 ECM2O94769 699 aaPredicted RBP1.39□□□□□ -2.19
RNU6-1049P-201ENST00000516414 ANKRD13DQ6ZTN6 518 aa1.39□□□□□ -2.19
RNU6-1049P-201ENST00000516414 BOLA1Q9Y3E2 137 aa1.39□□□□□ -2.19
RNU6-1049P-201ENST00000516414 NCKAP5LQ9HCH0 1330 aa1.39□□□□□ -2.19
RNU6-1049P-201ENST00000516414 KDM4FA0A1W2PPD8 638 aa1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 STK25O00506 426 aa1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 LCE2BO14633 110 aa1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 KIF3CO14782 793 aa1.38□□□□□ -2.19
RNU6-1049P-201ENST00000516414 CHGAP10645 457 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms