RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 ATF5Q9Y2D1 282 aaPredicted RBP3.64□□□□□ -1.83
SCARNA21.1-201ENST00000515996 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
SCARNA21.1-201ENST00000515996 POTEB3A0JP26 581 aa3.63□□□□□ -1.83
SCARNA21.1-201ENST00000515996 ATN1P54259 1190 aaPredicted RBP3.63□□□□□ -1.83
SCARNA21.1-201ENST00000515996 POTEBQ6S5H4 581 aa3.63□□□□□ -1.83
SCARNA21.1-201ENST00000515996 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
SCARNA21.1-201ENST00000515996 MS4A3Q96HJ5 214 aa3.62□□□□□ -1.83
SCARNA21.1-201ENST00000515996 EMP3P54852 163 aa3.61□□□□□ -1.83
SCARNA21.1-201ENST00000515996 HS3ST6Q96QI5 342 aa3.61□□□□□ -1.83
SCARNA21.1-201ENST00000515996 SSUH2Q9Y2M2 353 aa3.61□□□□□ -1.83
SCARNA21.1-201ENST00000515996 MYCNP04198 464 aaPredicted RBP3.59□□□□□ -1.83
SCARNA21.1-201ENST00000515996 MYT1LQ9UL68 1186 aa3.59□□□□□ -1.83
SCARNA21.1-201ENST00000515996 COLQQ9Y215 455 aaPredicted RBP3.59□□□□□ -1.83
SCARNA21.1-201ENST00000515996 PAK3O75914 559 aaPredicted RBP3.58□□□□□ -1.84
SCARNA21.1-201ENST00000515996 FAM205CA6NFA0 338 aa3.57□□□□□ -1.84
SCARNA21.1-201ENST00000515996 ZNF692Q9BU19 519 aaPredicted RBP3.56□□□□□ -1.84
SCARNA21.1-201ENST00000515996 SNPHO15079 494 aa3.55□□□□□ -1.84
SCARNA21.1-201ENST00000515996 SEC24BO95487 1268 aa3.55□□□□□ -1.84
SCARNA21.1-201ENST00000515996 PLA2G2EQ9NZK7 142 aa3.55□□□□□ -1.84
SCARNA21.1-201ENST00000515996 IRX2Q9BZI1 471 aaPredicted RBP3.53□□□□□ -1.84
SCARNA21.1-201ENST00000515996 BMP2KQ9NSY1 1161 aaPredicted RBP3.51□□□□□ -1.85
SCARNA21.1-201ENST00000515996 PABPN1Q86U42 306 aaKnown RBP eCLIP3.5□□□□□ -1.85
SCARNA21.1-201ENST00000515996 FBLN2P98095 1184 aa3.48□□□□□ -1.85
SCARNA21.1-201ENST00000515996 CREBZFQ9NS37 354 aa3.46□□□□□ -1.86
SCARNA21.1-201ENST00000515996 TRPC6Q9Y210 931 aa3.45□□□□□ -1.86
SCARNA21.1-201ENST00000515996 PTGER2P43116 358 aa3.43□□□□□ -1.86
SCARNA21.1-201ENST00000515996 IER5LQ5T953 404 aa3.42□□□□□ -1.86
SCARNA21.1-201ENST00000515996 TIE1P35590 1138 aa3.41□□□□□ -1.86
SCARNA21.1-201ENST00000515996 Q6ZNB5 142 aa3.41□□□□□ -1.86
SCARNA21.1-201ENST00000515996 TTLL13PA6NNM8 815 aa3.4□□□□□ -1.87
SCARNA21.1-201ENST00000515996 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.39□□□□□ -1.87
SCARNA21.1-201ENST00000515996 MKRN4PQ13434 485 aaPredicted RBP3.38□□□□□ -1.87
SCARNA21.1-201ENST00000515996 TRIM35Q9UPQ4 493 aa3.38□□□□□ -1.87
SCARNA21.1-201ENST00000515996 RGS20O76081 388 aa3.37□□□□□ -1.87
SCARNA21.1-201ENST00000515996 PLCG2P16885 1265 aa3.37□□□□□ -1.87
SCARNA21.1-201ENST00000515996 ERBB3P21860 1342 aa3.35□□□□□ -1.87
SCARNA21.1-201ENST00000515996 NPM1P06748 294 aaKnown RBP eCLIP3.34□□□□□ -1.87
SCARNA21.1-201ENST00000515996 KIF12Q96FN5 646 aa3.34□□□□□ -1.87
SCARNA21.1-201ENST00000515996 HCSTQ9UBK5 93 aa3.34□□□□□ -1.87
SCARNA21.1-201ENST00000515996 LCE2BO14633 110 aa3.33□□□□□ -1.88
SCARNA21.1-201ENST00000515996 VARS2Q5ST30 1063 aaKnown RBP3.31□□□□□ -1.88
SCARNA21.1-201ENST00000515996 CCDC61Q9Y6R9 512 aa3.31□□□□□ -1.88
SCARNA21.1-201ENST00000515996 MNX1P50219 401 aaPredicted RBP3.3□□□□□ -1.88
SCARNA21.1-201ENST00000515996 ANKRD13DQ6ZTN6 518 aa3.3□□□□□ -1.88
SCARNA21.1-201ENST00000515996 IRX5P78411 483 aaPredicted RBP3.29□□□□□ -1.88
SCARNA21.1-201ENST00000515996 ZNF775Q96BV0 537 aaPredicted RBP3.29□□□□□ -1.88
SCARNA21.1-201ENST00000515996 TSPYL2Q9H2G4 693 aaPredicted RBP3.29□□□□□ -1.88
SCARNA21.1-201ENST00000515996 MAP3K13O43283 966 aa3.28□□□□□ -1.88
SCARNA21.1-201ENST00000515996 HOXB1P14653 301 aaPredicted RBP3.28□□□□□ -1.88
SCARNA21.1-201ENST00000515996 ZNF687Q8N1G0 1237 aa3.27□□□□□ -1.89
SCARNA21.1-201ENST00000515996 C3orf67Q6ZVT6 689 aa3.26□□□□□ -1.89
SCARNA21.1-201ENST00000515996 SUZ12Q15022 739 aaKnown RBP3.25□□□□□ -1.89
SCARNA21.1-201ENST00000515996 TRAF7Q6Q0C0 670 aa3.25□□□□□ -1.89
SCARNA21.1-201ENST00000515996 HOXB3P14651 431 aaPredicted RBP3.24□□□□□ -1.89
SCARNA21.1-201ENST00000515996 OCEL1Q9H607 264 aa3.24□□□□□ -1.89
SCARNA21.1-201ENST00000515996 A0A0G2JS52 829 aa3.22□□□□□ -1.89
SCARNA21.1-201ENST00000515996 LSM11P83369 360 aaKnown RBP eCLIP3.22□□□□□ -1.89
SCARNA21.1-201ENST00000515996 ZNF787Q6DD87 383 aa3.22□□□□□ -1.89
SCARNA21.1-201ENST00000515996 ZNF710Q8N1W2 664 aa3.22□□□□□ -1.89
SCARNA21.1-201ENST00000515996 TMEM106CQ9BVX2 250 aa3.19□□□□□ -1.9
SCARNA21.1-201ENST00000515996 IFFO2Q5TF58 517 aa3.18□□□□□ -1.9
SCARNA21.1-201ENST00000515996 KRTAP4-8Q9BYQ9 185 aa3.18□□□□□ -1.9
SCARNA21.1-201ENST00000515996 STAG3Q9UJ98 1225 aa3.18□□□□□ -1.9
SCARNA21.1-201ENST00000515996 LAPTM4AQ15012 233 aa3.17□□□□□ -1.9
SCARNA21.1-201ENST00000515996 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
SCARNA21.1-201ENST00000515996 STK17AQ9UEE5 414 aa3.16□□□□□ -1.9
SCARNA21.1-201ENST00000515996 DOK7Q18PE1 504 aa3.15□□□□□ -1.91
SCARNA21.1-201ENST00000515996 KRTAP1-3Q8IUG1 177 aa3.14□□□□□ -1.91
SCARNA21.1-201ENST00000515996 KRTAP9-2Q9BYQ4 174 aa3.14□□□□□ -1.91
SCARNA21.1-201ENST00000515996 PCDHB13Q9Y5F0 798 aa3.14□□□□□ -1.91
SCARNA21.1-201ENST00000515996 PDCD7Q8N8D1 485 aaKnown RBP3.13□□□□□ -1.91
SCARNA21.1-201ENST00000515996 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
SCARNA21.1-201ENST00000515996 RIMBP2O15034 1052 aa3.11□□□□□ -1.91
SCARNA21.1-201ENST00000515996 GFRA3O60609 400 aa3.11□□□□□ -1.91
SCARNA21.1-201ENST00000515996 LCE2AQ5TA79 106 aaPredicted RBP3.11□□□□□ -1.91
SCARNA21.1-201ENST00000515996 L3MBTL3Q96JM7 780 aaPredicted RBP3.11□□□□□ -1.91
SCARNA21.1-201ENST00000515996 SGIP1Q9BQI5 828 aa3.11□□□□□ -1.91
SCARNA21.1-201ENST00000515996 IFNL1Q8IU54 200 aa3.1□□□□□ -1.91
SCARNA21.1-201ENST00000515996 FOXD4L1Q9NU39 408 aa3.1□□□□□ -1.91
SCARNA21.1-201ENST00000515996 TREML4Q6UXN2 200 aa3.09□□□□□ -1.91
SCARNA21.1-201ENST00000515996 KCTD12Q96CX2 325 aaKnown RBP3.09□□□□□ -1.91
SCARNA21.1-201ENST00000515996 KCNA4P22459 653 aa3.07□□□□□ -1.92
SCARNA21.1-201ENST00000515996 XP32Q5T750 250 aa3.07□□□□□ -1.92
SCARNA21.1-201ENST00000515996 POTEEQ6S8J3 1075 aa3.07□□□□□ -1.92
SCARNA21.1-201ENST00000515996 ATXN8OSP0DMR3 200 aa3.06□□□□□ -1.92
SCARNA21.1-201ENST00000515996 PBX2P40425 430 aa3.06□□□□□ -1.92
SCARNA21.1-201ENST00000515996 ADGRD1Q6QNK2 874 aa3.06□□□□□ -1.92
SCARNA21.1-201ENST00000515996 NRG2O14511 850 aaPredicted RBP3.05□□□□□ -1.92
SCARNA21.1-201ENST00000515996 GPR153Q6NV75 609 aa3.05□□□□□ -1.92
SCARNA21.1-201ENST00000515996 ZSWIM6Q9HCJ5 1215 aa3.05□□□□□ -1.92
SCARNA21.1-201ENST00000515996 AXIN2Q9Y2T1 843 aa3.05□□□□□ -1.92
SCARNA21.1-201ENST00000515996 PTPN5P54829 565 aa3.04□□□□□ -1.92
SCARNA21.1-201ENST00000515996 RASEFQ8IZ41 740 aa3.04□□□□□ -1.92
SCARNA21.1-201ENST00000515996 ZNF316A6NFI3 1004 aaPredicted RBP3.02□□□□□ -1.93
SCARNA21.1-201ENST00000515996 INSM1Q01101 510 aaPredicted RBP3.02□□□□□ -1.93
SCARNA21.1-201ENST00000515996 PSMG3-AS1Q96PY0 264 aa3.02□□□□□ -1.93
SCARNA21.1-201ENST00000515996 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
SCARNA21.1-201ENST00000515996 KRTAP4-8A0A0G2JLE6 195 aa3□□□□□ -1.93
SCARNA21.1-201ENST00000515996 POTECB2RU33 542 aa2.99□□□□□ -1.93
SCARNA21.1-201ENST00000515996 HRO43593 1189 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms