RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 ERICH3Q5RHP9 1530 aa27.01■■□□□ 1.91
TNPO1-210ENST00000515483 ILDR1Q86SU0 546 aaPredicted RBP26.98■■□□□ 1.91
TNPO1-210ENST00000515483 MAPKBP1O60336 1514 aa26.96■■□□□ 1.91
TNPO1-210ENST00000515483 DIP2BQ9P265 1576 aa26.91■■□□□ 1.9
TNPO1-210ENST00000515483 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
TNPO1-210ENST00000515483 KDM6BO15054 1643 aa26.89■■□□□ 1.9
TNPO1-210ENST00000515483 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
TNPO1-210ENST00000515483 ADCY10Q96PN6 1610 aa26.81■■□□□ 1.88
TNPO1-210ENST00000515483 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
TNPO1-210ENST00000515483 TSPOAP1O95153 1857 aa26.7■■□□□ 1.87
TNPO1-210ENST00000515483 SUPT5HO00267 1087 aaKnown RBP26.7■■□□□ 1.86
TNPO1-210ENST00000515483 KIAA0586Q9BVV6 1533 aa26.69■■□□□ 1.86
TNPO1-210ENST00000515483 PTPRGP23470 1445 aa26.62■■□□□ 1.85
TNPO1-210ENST00000515483 ADGRL1O94910 1474 aa26.59■■□□□ 1.85
TNPO1-210ENST00000515483 PLB1Q6P1J6 1458 aa26.55■■□□□ 1.84
TNPO1-210ENST00000515483 ABCC2Q92887 1545 aa26.54■■□□□ 1.84
TNPO1-210ENST00000515483 TTBK1Q5TCY1 1321 aaPredicted RBP26.53■■□□□ 1.84
TNPO1-210ENST00000515483 IGF1RP08069 1367 aa26.53■■□□□ 1.84
TNPO1-210ENST00000515483 ASXL2Q76L83 1435 aa26.53■■□□□ 1.84
TNPO1-210ENST00000515483 GLI2P10070 1586 aa26.5■■□□□ 1.83
TNPO1-210ENST00000515483 TNIKQ9UKE5 1360 aa26.5■■□□□ 1.83
TNPO1-210ENST00000515483 CARMIL2Q6F5E8 1435 aa26.49■■□□□ 1.83
TNPO1-210ENST00000515483 KIF27Q86VH2 1401 aa26.45■■□□□ 1.82
TNPO1-210ENST00000515483 HECW2Q9P2P5 1572 aa26.43■■□□□ 1.82
TNPO1-210ENST00000515483 CUL7Q14999 1698 aa26.43■■□□□ 1.82
TNPO1-210ENST00000515483 PPRC1Q5VV67 1664 aaKnown RBP26.43■■□□□ 1.82
TNPO1-210ENST00000515483 COL17A1Q9UMD9 1497 aaPredicted RBP26.41■■□□□ 1.82
TNPO1-210ENST00000515483 UHRF1BP1LA0JNW5 1464 aa26.4■■□□□ 1.82
TNPO1-210ENST00000515483 TEX14Q8IWB6 1497 aa26.38■■□□□ 1.81
TNPO1-210ENST00000515483 UACAQ9BZF9 1416 aa26.37■■□□□ 1.81
TNPO1-210ENST00000515483 CARMIL1Q5VZK9 1371 aa26.35■■□□□ 1.81
TNPO1-210ENST00000515483 EPRSP07814 1512 aaKnown RBP26.34■■□□□ 1.81
TNPO1-210ENST00000515483 MAP3K4Q9Y6R4 1608 aa26.28■■□□□ 1.8
TNPO1-210ENST00000515483 KDM5BQ9UGL1 1544 aa26.28■■□□□ 1.8
TNPO1-210ENST00000515483 IQGAP2Q13576 1575 aa26.26■■□□□ 1.79
TNPO1-210ENST00000515483 FBXO41Q8TF61 875 aa26.23■■□□□ 1.79
TNPO1-210ENST00000515483 DISP1Q96F81 1524 aa26.2■■□□□ 1.79
TNPO1-210ENST00000515483 ZCCHC11Q5TAX3 1644 aaKnown RBP26.14■■□□□ 1.78
TNPO1-210ENST00000515483 WDR7Q9Y4E6 1490 aa26.14■■□□□ 1.78
TNPO1-210ENST00000515483 CD109Q6YHK3 1445 aa26.1■■□□□ 1.77
TNPO1-210ENST00000515483 UGGT2Q9NYU1 1516 aa26.09■■□□□ 1.77
TNPO1-210ENST00000515483 MAGI3Q5TCQ9 1506 aa26.08■■□□□ 1.77
TNPO1-210ENST00000515483 KCNH8Q96L42 1107 aa26.04■■□□□ 1.76
TNPO1-210ENST00000515483 KIAA0556O60303 1618 aa26.02■■□□□ 1.76
TNPO1-210ENST00000515483 RAPGEF2Q9Y4G8 1499 aa25.99■■□□□ 1.75
TNPO1-210ENST00000515483 CFAP43Q8NDM7 1665 aa25.98■■□□□ 1.75
TNPO1-210ENST00000515483 KIF21BO75037 1637 aa25.92■■□□□ 1.74
TNPO1-210ENST00000515483 ARAP3Q8WWN8 1544 aa25.9■■□□□ 1.74
TNPO1-210ENST00000515483 PTPRMP28827 1452 aa25.89■■□□□ 1.73
TNPO1-210ENST00000515483 GOLGA3Q08378 1498 aa25.87■■□□□ 1.73
TNPO1-210ENST00000515483 PHLDB1Q86UU1 1377 aa25.85■■□□□ 1.73
TNPO1-210ENST00000515483 ABCA8O94911 1581 aa25.84■■□□□ 1.73
TNPO1-210ENST00000515483 FAM9AQ8IZU1 332 aaPredicted RBP25.82■■□□□ 1.72
TNPO1-210ENST00000515483 ADAMTSL3P82987 1691 aa25.8■■□□□ 1.72
TNPO1-210ENST00000515483 PCF11O94913 1555 aaKnown RBP25.75■■□□□ 1.71
TNPO1-210ENST00000515483 ARID4BQ4LE39 1312 aaPredicted RBP25.75■■□□□ 1.71
TNPO1-210ENST00000515483 RAPGEF3O95398 923 aa25.75■■□□□ 1.71
TNPO1-210ENST00000515483 LMTK3Q96Q04 1460 aa25.71■■□□□ 1.71
TNPO1-210ENST00000515483 CTTNBP2Q8WZ74 1663 aa25.69■■□□□ 1.7
TNPO1-210ENST00000515483 ARID3CA6NKF2 412 aa25.69■■□□□ 1.7
TNPO1-210ENST00000515483 ATP10BO94823 1461 aa25.67■■□□□ 1.7
TNPO1-210ENST00000515483 NEO1Q92859 1461 aa25.67■■□□□ 1.7
TNPO1-210ENST00000515483 BCORL1Q5H9F3 1711 aa25.66■■□□□ 1.7
TNPO1-210ENST00000515483 ABCA9Q8IUA7 1624 aa25.64■■□□□ 1.7
TNPO1-210ENST00000515483 MADDQ8WXG6 1647 aa25.63■■□□□ 1.69
TNPO1-210ENST00000515483 CERKQ8TCT0 537 aa25.6■■□□□ 1.69
TNPO1-210ENST00000515483 HSPA2P54652 639 aa25.59■■□□□ 1.69
TNPO1-210ENST00000515483 P3H3Q8IVL6 736 aa25.57■■□□□ 1.68
TNPO1-210ENST00000515483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.55■■□□□ 1.68
TNPO1-210ENST00000515483 HNRNPUL2Q1KMD3 747 aaKnown RBP25.55■■□□□ 1.68
TNPO1-210ENST00000515483 FRMPD1Q5SYB0 1578 aa25.53■■□□□ 1.68
TNPO1-210ENST00000515483 PRXQ9BXM0 1461 aa25.53■■□□□ 1.68
TNPO1-210ENST00000515483 POGZQ7Z3K3 1410 aa25.52■■□□□ 1.68
TNPO1-210ENST00000515483 PLPPR3Q6T4P5 718 aa25.51■■□□□ 1.67
TNPO1-210ENST00000515483 RIMS1Q86UR5 1692 aaKnown RBP25.51■■□□□ 1.67
TNPO1-210ENST00000515483 DENND4BO75064 1496 aaPredicted RBP25.49■■□□□ 1.67
TNPO1-210ENST00000515483 ARHGEF40Q8TER5 1519 aa25.48■■□□□ 1.67
TNPO1-210ENST00000515483 DISP3Q9P2K9 1392 aa25.46■■□□□ 1.67
TNPO1-210ENST00000515483 SOCS7O14512 581 aa25.46■■□□□ 1.67
TNPO1-210ENST00000515483 AKNAQ7Z591 1439 aa25.46■■□□□ 1.67
TNPO1-210ENST00000515483 FANCAO15360 1455 aa25.45■■□□□ 1.66
TNPO1-210ENST00000515483 FHOD3Q2V2M9 1422 aa25.45■■□□□ 1.66
TNPO1-210ENST00000515483 ILDR2Q71H61 639 aa25.41■■□□□ 1.66
TNPO1-210ENST00000515483 RAPGEF6Q8TEU7 1601 aa25.41■■□□□ 1.66
TNPO1-210ENST00000515483 PLEKHD1A6NEE1 506 aa25.4■■□□□ 1.66
TNPO1-210ENST00000515483 RICTORQ6R327 1708 aa25.37■■□□□ 1.65
TNPO1-210ENST00000515483 MLECQ14165 292 aa25.36■■□□□ 1.65
TNPO1-210ENST00000515483 DMRT2Q9Y5R5 561 aa25.35■■□□□ 1.65
TNPO1-210ENST00000515483 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
TNPO1-210ENST00000515483 MAGI2Q86UL8 1455 aa25.34■■□□□ 1.65
TNPO1-210ENST00000515483 EFCAB5A4FU69 1503 aa25.33■■□□□ 1.65
TNPO1-210ENST00000515483 ZMYM4Q5VZL5 1548 aa25.33■■□□□ 1.65
TNPO1-210ENST00000515483 ZFYVE16Q7Z3T8 1539 aa25.33■■□□□ 1.65
TNPO1-210ENST00000515483 SAMD9Q5K651 1589 aa25.33■■□□□ 1.65
TNPO1-210ENST00000515483 CFAP74Q9C0B2 1584 aa25.33■■□□□ 1.65
TNPO1-210ENST00000515483 YEATS2Q9ULM3 1422 aa25.32■■□□□ 1.64
TNPO1-210ENST00000515483 TTC37Q6PGP7 1564 aa25.27■■□□□ 1.64
TNPO1-210ENST00000515483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.24■■□□□ 1.63
TNPO1-210ENST00000515483 FER1L4A9Z1Z3 1794 aa25.23■■□□□ 1.63
TNPO1-210ENST00000515483 SIGLEC1Q9BZZ2 1709 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms