RNA–Protein interactions for RNA: ENST00000515324.1

PDE4D-224, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-224ENST00000515324 BAZ1AQ9NRL2 1556 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-224ENST00000515324 RGL2O15211 777 aa10.3□□□□□ -0.76
PDE4D-224ENST00000515324 MROH2BQ7Z745 1585 aa10.3□□□□□ -0.76
PDE4D-224ENST00000515324 ATAD2BQ9ULI0 1458 aa10.29□□□□□ -0.76
PDE4D-224ENST00000515324 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
PDE4D-224ENST00000515324 NCAPD3P42695 1498 aa10.27□□□□□ -0.77
PDE4D-224ENST00000515324 CHGAP10645 457 aaKnown RBP10.26□□□□□ -0.77
PDE4D-224ENST00000515324 SMARCA2P51531 1590 aa10.24□□□□□ -0.77
PDE4D-224ENST00000515324 SPDYE1Q8NFV5 336 aaPredicted RBP10.24□□□□□ -0.77
PDE4D-224ENST00000515324 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
PDE4D-224ENST00000515324 VSIG10Q8N0Z9 540 aa10.22□□□□□ -0.77
PDE4D-224ENST00000515324 TRIM41Q8WV44 630 aa10.22□□□□□ -0.77
PDE4D-224ENST00000515324 BCANQ96GW7 911 aa10.22□□□□□ -0.77
PDE4D-224ENST00000515324 NPM1P06748 294 aaKnown RBP eCLIP10.21□□□□□ -0.77
PDE4D-224ENST00000515324 PEG3Q9GZU2 1588 aa10.21□□□□□ -0.78
PDE4D-224ENST00000515324 WIZO95785 1651 aa10.2□□□□□ -0.78
PDE4D-224ENST00000515324 GSE1Q14687 1217 aa10.2□□□□□ -0.78
PDE4D-224ENST00000515324 SPRYD3Q8NCJ5 442 aa10.2□□□□□ -0.78
PDE4D-224ENST00000515324 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
PDE4D-224ENST00000515324 DCAF8Q5TAQ9 597 aa10.19□□□□□ -0.78
PDE4D-224ENST00000515324 HMGXB3Q12766 1538 aa10.18□□□□□ -0.78
PDE4D-224ENST00000515324 RSF1Q96T23 1441 aaPredicted RBP10.18□□□□□ -0.78
PDE4D-224ENST00000515324 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
PDE4D-224ENST00000515324 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
PDE4D-224ENST00000515324 FAM212AQ96EL1 285 aa10.14□□□□□ -0.79
PDE4D-224ENST00000515324 TAOK2Q9UL54 1235 aa10.14□□□□□ -0.79
PDE4D-224ENST00000515324 NESP48681 1621 aa10.07□□□□□ -0.8
PDE4D-224ENST00000515324 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
PDE4D-224ENST00000515324 RIOK3O14730 519 aaKnown RBP10.05□□□□□ -0.8
PDE4D-224ENST00000515324 NUBP1P53384 320 aa10.05□□□□□ -0.8
PDE4D-224ENST00000515324 REM2Q8IYK8 340 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-224ENST00000515324 HS6ST3Q8IZP7 471 aa10.05□□□□□ -0.8
PDE4D-224ENST00000515324 TOP2AP11388 1531 aaKnown RBP10.04□□□□□ -0.8
PDE4D-224ENST00000515324 STK25O00506 426 aa10.03□□□□□ -0.8
PDE4D-224ENST00000515324 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
PDE4D-224ENST00000515324 KDM2AQ9Y2K7 1162 aa10.03□□□□□ -0.8
PDE4D-224ENST00000515324 SUPT5HO00267 1087 aaKnown RBP10□□□□□ -0.81
PDE4D-224ENST00000515324 RNF25Q96BH1 459 aaPredicted RBP9.99□□□□□ -0.81
PDE4D-224ENST00000515324 CADPSQ9ULU8 1353 aa9.99□□□□□ -0.81
PDE4D-224ENST00000515324 VGFO15240 615 aaPredicted RBP9.98□□□□□ -0.81
PDE4D-224ENST00000515324 ERCC6Q03468 1493 aa9.98□□□□□ -0.81
PDE4D-224ENST00000515324 LAMC3Q9Y6N6 1575 aa9.97□□□□□ -0.81
PDE4D-224ENST00000515324 NBR1Q14596 966 aa9.97□□□□□ -0.81
PDE4D-224ENST00000515324 CCDC88BA6NC98 1476 aa9.97□□□□□ -0.81
PDE4D-224ENST00000515324 PYGBP11216 843 aa9.96□□□□□ -0.82
PDE4D-224ENST00000515324 STK24Q9Y6E0 443 aa9.96□□□□□ -0.82
PDE4D-224ENST00000515324 PITPNM1O00562 1244 aa9.95□□□□□ -0.82
PDE4D-224ENST00000515324 PRKCSHP14314 528 aaPredicted RBP9.95□□□□□ -0.82
PDE4D-224ENST00000515324 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
PDE4D-224ENST00000515324 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
PDE4D-224ENST00000515324 KIF21AQ7Z4S6 1674 aa9.93□□□□□ -0.82
PDE4D-224ENST00000515324 PDS5BQ9NTI5 1447 aa9.92□□□□□ -0.82
PDE4D-224ENST00000515324 CFTRP13569 1480 aa9.91□□□□□ -0.82
PDE4D-224ENST00000515324 BCL11BQ9C0K0 894 aaPredicted RBP9.91□□□□□ -0.82
PDE4D-224ENST00000515324 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.82
PDE4D-224ENST00000515324 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.89□□□□□ -0.83
PDE4D-224ENST00000515324 MNX1P50219 401 aaPredicted RBP9.89□□□□□ -0.83
PDE4D-224ENST00000515324 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
PDE4D-224ENST00000515324 CHADLQ6NUI6 762 aa9.88□□□□□ -0.83
PDE4D-224ENST00000515324 RYDENQ9NUL5 291 aaKnown RBP9.87□□□□□ -0.83
PDE4D-224ENST00000515324 FANCD2Q9BXW9 1451 aa9.86□□□□□ -0.83
PDE4D-224ENST00000515324 THOC2Q8NI27 1593 aaKnown RBP9.86□□□□□ -0.83
PDE4D-224ENST00000515324 CHRM1P11229 460 aaPredicted RBP9.85□□□□□ -0.83
PDE4D-224ENST00000515324 NKX1-1Q15270 411 aaPredicted RBP9.84□□□□□ -0.83
PDE4D-224ENST00000515324 CUX2O14529 1486 aa9.84□□□□□ -0.83
PDE4D-224ENST00000515324 CEP164Q9UPV0 1460 aa9.84□□□□□ -0.83
PDE4D-224ENST00000515324 DNAJC5Q9H3Z4 198 aa9.83□□□□□ -0.84
PDE4D-224ENST00000515324 PRDM2Q13029 1718 aa9.82□□□□□ -0.84
PDE4D-224ENST00000515324 GTPBP6O43824 516 aaPredicted RBP9.82□□□□□ -0.84
PDE4D-224ENST00000515324 MRC2Q9UBG0 1479 aa9.82□□□□□ -0.84
PDE4D-224ENST00000515324 ZNF467Q7Z7K2 595 aaPredicted RBP9.81□□□□□ -0.84
PDE4D-224ENST00000515324 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
PDE4D-224ENST00000515324 WDR62O43379 1518 aa9.78□□□□□ -0.84
PDE4D-224ENST00000515324 URB2Q14146 1524 aaKnown RBP9.77□□□□□ -0.84
PDE4D-224ENST00000515324 SGIP1Q9BQI5 828 aa9.77□□□□□ -0.85
PDE4D-224ENST00000515324 FARP1Q9Y4F1 1045 aaPredicted RBP9.77□□□□□ -0.85
PDE4D-224ENST00000515324 PRKAR2AP13861 404 aaKnown RBP9.76□□□□□ -0.85
PDE4D-224ENST00000515324 PDAP1Q13442 181 aaKnown RBP9.74□□□□□ -0.85
PDE4D-224ENST00000515324 WDR70Q9NW82 654 aa9.73□□□□□ -0.85
PDE4D-224ENST00000515324 PCDHB8Q9UN66 801 aa9.72□□□□□ -0.85
PDE4D-224ENST00000515324 PCDHB13Q9Y5F0 798 aa9.72□□□□□ -0.85
PDE4D-224ENST00000515324 TOPBP1Q92547 1522 aa9.71□□□□□ -0.86
PDE4D-224ENST00000515324 PSEN1P49768 467 aa9.69□□□□□ -0.86
PDE4D-224ENST00000515324 ABCC8Q09428 1581 aa9.68□□□□□ -0.86
PDE4D-224ENST00000515324 DNMBPQ6XZF7 1577 aa9.68□□□□□ -0.86
PDE4D-224ENST00000515324 P3H3Q8IVL6 736 aa9.67□□□□□ -0.86
PDE4D-224ENST00000515324 CUX1P39880 1505 aa9.66□□□□□ -0.86
PDE4D-224ENST00000515324 ZNF579Q8NAF0 562 aaKnown RBP9.65□□□□□ -0.86
PDE4D-224ENST00000515324 POLA1P09884 1462 aaPredicted RBP9.63□□□□□ -0.87
PDE4D-224ENST00000515324 IFT140Q96RY7 1462 aa9.63□□□□□ -0.87
PDE4D-224ENST00000515324 ZNF608Q9ULD9 1512 aaPredicted RBP9.62□□□□□ -0.87
PDE4D-224ENST00000515324 RAD54L2Q9Y4B4 1467 aa9.62□□□□□ -0.87
PDE4D-224ENST00000515324 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
PDE4D-224ENST00000515324 FGD5Q6ZNL6 1462 aa9.61□□□□□ -0.87
PDE4D-224ENST00000515324 SOGA1O94964 1423 aa9.61□□□□□ -0.87
PDE4D-224ENST00000515324 TARBP1Q13395 1621 aaKnown RBP9.6□□□□□ -0.87
PDE4D-224ENST00000515324 CABP2Q9NPB3 220 aa9.6□□□□□ -0.87
PDE4D-224ENST00000515324 GOLGA2Q08379 1002 aa9.59□□□□□ -0.87
PDE4D-224ENST00000515324 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.87
PDE4D-224ENST00000515324 WRNQ14191 1432 aaPredicted RBP eCLIP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms