RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 CANXP27824 592 aaKnown RBP8.46□□□□□ -1.06
ATP2C1-222ENST00000514654 ABCC8Q09428 1581 aa8.45□□□□□ -1.06
ATP2C1-222ENST00000514654 SIN3AQ96ST3 1273 aa8.44□□□□□ -1.06
ATP2C1-222ENST00000514654 RGL3Q3MIN7 710 aa8.44□□□□□ -1.06
ATP2C1-222ENST00000514654 CFDP1Q9UEE9 299 aaPredicted RBP8.44□□□□□ -1.06
ATP2C1-222ENST00000514654 CUX2O14529 1486 aa8.43□□□□□ -1.06
ATP2C1-222ENST00000514654 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
ATP2C1-222ENST00000514654 CARMIL1Q5VZK9 1371 aa8.42□□□□□ -1.06
ATP2C1-222ENST00000514654 NEFMP07197 916 aa8.41□□□□□ -1.06
ATP2C1-222ENST00000514654 RTL5Q5HYW3 569 aaPredicted RBP8.41□□□□□ -1.06
ATP2C1-222ENST00000514654 MYT1Q01538 1121 aa8.41□□□□□ -1.06
ATP2C1-222ENST00000514654 TMC1Q8TDI8 760 aa8.41□□□□□ -1.06
ATP2C1-222ENST00000514654 MRS2Q9HD23 443 aa8.41□□□□□ -1.06
ATP2C1-222ENST00000514654 ERCC6Q03468 1493 aa8.4□□□□□ -1.06
ATP2C1-222ENST00000514654 EIF4G2P78344 907 aaKnown RBP eCLIP8.4□□□□□ -1.07
ATP2C1-222ENST00000514654 KANK4Q5T7N3 995 aaPredicted RBP8.4□□□□□ -1.07
ATP2C1-222ENST00000514654 IRX6P78412 446 aaPredicted RBP8.38□□□□□ -1.07
ATP2C1-222ENST00000514654 WIZO95785 1651 aa8.38□□□□□ -1.07
ATP2C1-222ENST00000514654 TDRD9Q8NDG6 1382 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-222ENST00000514654 ZBTB47Q9UFB7 747 aaPredicted RBP8.38□□□□□ -1.07
ATP2C1-222ENST00000514654 NPM2Q86SE8 214 aaKnown RBP8.37□□□□□ -1.07
ATP2C1-222ENST00000514654 SCAF1Q9H7N4 1312 aaKnown RBP8.36□□□□□ -1.07
ATP2C1-222ENST00000514654 CCNB3Q8WWL7 1395 aa8.35□□□□□ -1.07
ATP2C1-222ENST00000514654 EIF4G1Q04637 1599 aaKnown RBP8.35□□□□□ -1.07
ATP2C1-222ENST00000514654 PLEKHG5O94827 1062 aa8.33□□□□□ -1.08
ATP2C1-222ENST00000514654 WDR43Q15061 677 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATP2C1-222ENST00000514654 SMARCA2P51531 1590 aa8.31□□□□□ -1.08
ATP2C1-222ENST00000514654 VPS8Q8N3P4 1428 aa8.31□□□□□ -1.08
ATP2C1-222ENST00000514654 CARD11Q9BXL7 1154 aa8.31□□□□□ -1.08
ATP2C1-222ENST00000514654 FOXD1Q16676 465 aa8.31□□□□□ -1.08
ATP2C1-222ENST00000514654 FHAD1B1AJZ9 1412 aa8.31□□□□□ -1.08
ATP2C1-222ENST00000514654 TOP2AP11388 1531 aaKnown RBP8.3□□□□□ -1.08
ATP2C1-222ENST00000514654 RUSC2Q8N2Y8 1516 aa8.3□□□□□ -1.08
ATP2C1-222ENST00000514654 CCDC136Q96JN2 1154 aa8.29□□□□□ -1.08
ATP2C1-222ENST00000514654 ATAD2BQ9ULI0 1458 aa8.29□□□□□ -1.08
ATP2C1-222ENST00000514654 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
ATP2C1-222ENST00000514654 PPP1R15AO75807 674 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-222ENST00000514654 ANP32AP39687 249 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-222ENST00000514654 ARID4BQ4LE39 1312 aaPredicted RBP8.27□□□□□ -1.09
ATP2C1-222ENST00000514654 PDS5BQ9NTI5 1447 aa8.27□□□□□ -1.09
ATP2C1-222ENST00000514654 DCAF11Q8TEB1 546 aa8.26□□□□□ -1.09
ATP2C1-222ENST00000514654 RAPGEF2Q9Y4G8 1499 aa8.26□□□□□ -1.09
ATP2C1-222ENST00000514654 ZBTB7CA1YPR0 619 aa8.24□□□□□ -1.09
ATP2C1-222ENST00000514654 FHOD3Q2V2M9 1422 aa8.24□□□□□ -1.09
ATP2C1-222ENST00000514654 SETD5Q9C0A6 1442 aa8.24□□□□□ -1.09
ATP2C1-222ENST00000514654 C14orf37Q86TY3 774 aa8.23□□□□□ -1.09
ATP2C1-222ENST00000514654 PPM1GO15355 546 aaPredicted RBP8.23□□□□□ -1.09
ATP2C1-222ENST00000514654 KNSTRNQ9Y448 316 aa8.23□□□□□ -1.09
ATP2C1-222ENST00000514654 SUPT16HQ9Y5B9 1047 aaKnown RBP8.23□□□□□ -1.09
ATP2C1-222ENST00000514654 SMARCA4P51532 1647 aa8.23□□□□□ -1.09
ATP2C1-222ENST00000514654 TNNT2P45379 298 aaPredicted RBP8.23□□□□□ -1.09
ATP2C1-222ENST00000514654 PKD2Q13563 968 aa8.23□□□□□ -1.09
ATP2C1-222ENST00000514654 MLECQ14165 292 aa8.22□□□□□ -1.09
ATP2C1-222ENST00000514654 ARHGAP35Q9NRY4 1499 aa8.22□□□□□ -1.09
ATP2C1-222ENST00000514654 RAB3GAP2Q9H2M9 1393 aa8.22□□□□□ -1.09
ATP2C1-222ENST00000514654 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
ATP2C1-222ENST00000514654 CC2D1BQ5T0F9 858 aaKnown RBP8.21□□□□□ -1.09
ATP2C1-222ENST00000514654 GGT6Q6P531 493 aa8.21□□□□□ -1.1
ATP2C1-222ENST00000514654 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.21□□□□□ -1.1
ATP2C1-222ENST00000514654 HSPA5P11021 654 aaKnown RBP8.2□□□□□ -1.1
ATP2C1-222ENST00000514654 MPHOSPH9Q99550 1183 aa8.19□□□□□ -1.1
ATP2C1-222ENST00000514654 FMN1Q68DA7 1419 aa8.18□□□□□ -1.1
ATP2C1-222ENST00000514654 HNRNPMP52272 730 aaKnown RBP eCLIP8.18□□□□□ -1.15e-7■■■■■ 28.1
ATP2C1-222ENST00000514654 SAFB2Q14151 953 aaKnown RBP eCLIP8.18□□□□□ -1.1
ATP2C1-222ENST00000514654 JPH4Q96JJ6 628 aa8.18□□□□□ -1.1
ATP2C1-222ENST00000514654 POGKQ9P215 609 aa8.18□□□□□ -1.1
ATP2C1-222ENST00000514654 CDCA8Q53HL2 280 aa8.18□□□□□ -1.1
ATP2C1-222ENST00000514654 CARMIL2Q6F5E8 1435 aa8.18□□□□□ -1.1
ATP2C1-222ENST00000514654 HSP90AA1P07900 732 aaKnown RBP8.17□□□□□ -1.1
ATP2C1-222ENST00000514654 A0A0G2JS52 829 aa8.17□□□□□ -1.1
ATP2C1-222ENST00000514654 FANCD2Q9BXW9 1451 aa8.16□□□□□ -1.1
ATP2C1-222ENST00000514654 NUP155O75694 1391 aa8.16□□□□□ -1.1
ATP2C1-222ENST00000514654 UPF2Q9HAU5 1272 aaKnown RBP8.16□□□□□ -1.1
ATP2C1-222ENST00000514654 TIMELESSQ9UNS1 1208 aa8.16□□□□□ -1.1
ATP2C1-222ENST00000514654 NBR1Q14596 966 aa8.15□□□□□ -1.1
ATP2C1-222ENST00000514654 TRHP20396 242 aaPredicted RBP8.15□□□□□ -1.1
ATP2C1-222ENST00000514654 CFAP53Q96M91 514 aa8.15□□□□□ -1.1
ATP2C1-222ENST00000514654 EFCAB2Q5VUJ9 269 aa8.14□□□□□ -1.11
ATP2C1-222ENST00000514654 L3MBTL2Q969R5 705 aa8.14□□□□□ -1.11
ATP2C1-222ENST00000514654 STK26Q9P289 416 aa8.14□□□□□ -1.11
ATP2C1-222ENST00000514654 TMF1P82094 1093 aa8.14□□□□□ -1.11
ATP2C1-222ENST00000514654 LAS1LQ9Y4W2 734 aaKnown RBP8.14□□□□□ -1.11
ATP2C1-222ENST00000514654 LMOD2Q6P5Q4 547 aa8.13□□□□□ -1.11
ATP2C1-222ENST00000514654 IGF1RP08069 1367 aa8.13□□□□□ -1.11
ATP2C1-222ENST00000514654 RAD54L2Q9Y4B4 1467 aa8.13□□□□□ -1.11
ATP2C1-222ENST00000514654 U2SURPO15042 1029 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-222ENST00000514654 SOX12O15370 315 aa8.12□□□□□ -1.11
ATP2C1-222ENST00000514654 KIF3BO15066 747 aa8.12□□□□□ -1.11
ATP2C1-222ENST00000514654 KANK1Q14678 1352 aa8.12□□□□□ -1.11
ATP2C1-222ENST00000514654 SRPK2P78362 688 aaKnown RBP8.11□□□□□ -1.11
ATP2C1-222ENST00000514654 FRAT1Q92837 279 aaPredicted RBP8.11□□□□□ -1.11
ATP2C1-222ENST00000514654 ANKRD30AQ9BXX3 1397 aa8.11□□□□□ -1.11
ATP2C1-222ENST00000514654 NUTM2DQ5VT03 806 aaPredicted RBP8.11□□□□□ -1.11
ATP2C1-222ENST00000514654 B4GALNT3Q6L9W6 998 aa8.11□□□□□ -1.11
ATP2C1-222ENST00000514654 ARXQ96QS3 562 aa8.1□□□□□ -1.11
ATP2C1-222ENST00000514654 FGD5Q6ZNL6 1462 aa8.1□□□□□ -1.11
ATP2C1-222ENST00000514654 MAPK8IP3Q9UPT6 1336 aa8.09□□□□□ -1.11
ATP2C1-222ENST00000514654 MYH16Q9H6N6 1097 aa8.09□□□□□ -1.11
ATP2C1-222ENST00000514654 DHX57Q6P158 1386 aaKnown RBP8.08□□□□□ -1.12
ATP2C1-222ENST00000514654 NUDCQ9Y266 331 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms