RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
CLCN3-209ENST00000513761 KCNH8Q96L42 1107 aa10.44□□□□□ -0.74
CLCN3-209ENST00000513761 MTUS2Q5JR59 1369 aa10.44□□□□□ -0.74
CLCN3-209ENST00000513761 PPP4R2Q9NY27 417 aa10.43□□□□□ -0.74
CLCN3-209ENST00000513761 KANK4Q5T7N3 995 aaPredicted RBP10.43□□□□□ -0.74
CLCN3-209ENST00000513761 FBLN2P98095 1184 aa10.42□□□□□ -0.74
CLCN3-209ENST00000513761 RTN4Q9NQC3 1192 aaKnown RBP10.42□□□□□ -0.74
CLCN3-209ENST00000513761 MROH2BQ7Z745 1585 aa10.42□□□□□ -0.74
CLCN3-209ENST00000513761 ARXQ96QS3 562 aa10.42□□□□□ -0.74
CLCN3-209ENST00000513761 CCNB3Q8WWL7 1395 aa10.42□□□□□ -0.74
CLCN3-209ENST00000513761 VPS8Q8N3P4 1428 aa10.4□□□□□ -0.74
CLCN3-209ENST00000513761 NOP58Q9Y2X3 529 aaKnown RBP10.4□□□□□ -0.74
CLCN3-209ENST00000513761 KDM2AQ9Y2K7 1162 aa10.4□□□□□ -0.74
CLCN3-209ENST00000513761 DEKP35659 375 aaKnown RBP10.39□□□□□ -0.75
CLCN3-209ENST00000513761 LAS1LQ9Y4W2 734 aaKnown RBP10.38□□□□□ -0.75
CLCN3-209ENST00000513761 CCER2I3L3R5 266 aa10.37□□□□□ -0.75
CLCN3-209ENST00000513761 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
CLCN3-209ENST00000513761 NEFMP07197 916 aa10.33□□□□□ -0.76
CLCN3-209ENST00000513761 RAB3GAP2Q9H2M9 1393 aa10.33□□□□□ -0.76
CLCN3-209ENST00000513761 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
CLCN3-209ENST00000513761 UPF2Q9HAU5 1272 aaKnown RBP10.32□□□□□ -0.76
CLCN3-209ENST00000513761 NACADO15069 1562 aa10.31□□□□□ -0.76
CLCN3-209ENST00000513761 WIZO95785 1651 aa10.31□□□□□ -0.76
CLCN3-209ENST00000513761 SETD5Q9C0A6 1442 aa10.31□□□□□ -0.76
CLCN3-209ENST00000513761 DHX57Q6P158 1386 aaKnown RBP10.31□□□□□ -0.76
CLCN3-209ENST00000513761 RUSC2Q8N2Y8 1516 aa10.3□□□□□ -0.76
CLCN3-209ENST00000513761 WDR43Q15061 677 aaKnown RBP eCLIP10.3□□□□□ -0.76
CLCN3-209ENST00000513761 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.29□□□□□ -0.76
CLCN3-209ENST00000513761 DDRGK1Q96HY6 314 aa10.29□□□□□ -0.76
CLCN3-209ENST00000513761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.29□□□□□ -0.76
CLCN3-209ENST00000513761 HSP90AA1P07900 732 aaKnown RBP10.29□□□□□ -0.76
CLCN3-209ENST00000513761 HSPA5P11021 654 aaKnown RBP10.28□□□□□ -0.76
CLCN3-209ENST00000513761 BAZ1BQ9UIG0 1483 aaKnown RBP10.28□□□□□ -0.76
CLCN3-209ENST00000513761 TIMELESSQ9UNS1 1208 aa10.28□□□□□ -0.76
CLCN3-209ENST00000513761 PPM1GO15355 546 aaPredicted RBP10.26□□□□□ -0.77
CLCN3-209ENST00000513761 PPP1R15AO75807 674 aaPredicted RBP10.26□□□□□ -0.77
CLCN3-209ENST00000513761 GLIPR1L2Q4G1C9 344 aa10.25□□□□□ -0.77
CLCN3-209ENST00000513761 ANP32BQ92688 251 aaKnown RBP10.24□□□□□ -0.77
CLCN3-209ENST00000513761 CARD11Q9BXL7 1154 aa10.23□□□□□ -0.77
CLCN3-209ENST00000513761 RGL3Q3MIN7 710 aa10.23□□□□□ -0.77
CLCN3-209ENST00000513761 FOXD1Q16676 465 aa10.23□□□□□ -0.77
CLCN3-209ENST00000513761 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
CLCN3-209ENST00000513761 RGS3P49796 1198 aa10.23□□□□□ -0.77
CLCN3-209ENST00000513761 TSPY4P0CV99 314 aa10.22□□□□□ -0.77
CLCN3-209ENST00000513761 TSPY10P0CW01 314 aa10.22□□□□□ -0.77
CLCN3-209ENST00000513761 CHGAP10645 457 aaKnown RBP10.2□□□□□ -0.78
CLCN3-209ENST00000513761 ERICH6BQ5W0A0 696 aa10.2□□□□□ -0.78
CLCN3-209ENST00000513761 BECN1Q14457 450 aa10.19□□□□□ -0.78
CLCN3-209ENST00000513761 FHAD1B1AJZ9 1412 aa10.19□□□□□ -0.78
CLCN3-209ENST00000513761 CARMIL1Q5VZK9 1371 aa10.19□□□□□ -0.78
CLCN3-209ENST00000513761 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-209ENST00000513761 CC2D1BQ5T0F9 858 aaKnown RBP10.18□□□□□ -0.78
CLCN3-209ENST00000513761 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
CLCN3-209ENST00000513761 CUX2O14529 1486 aa10.17□□□□□ -0.78
CLCN3-209ENST00000513761 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
CLCN3-209ENST00000513761 ARHGAP35Q9NRY4 1499 aa10.16□□□□□ -0.78
CLCN3-209ENST00000513761 IPO9Q96P70 1041 aaKnown RBP10.16□□□□□ -0.78
CLCN3-209ENST00000513761 CFDP1Q9UEE9 299 aaPredicted RBP10.15□□□□□ -0.78
CLCN3-209ENST00000513761 FANCIQ9NVI1 1328 aa10.13□□□□□ -0.79
CLCN3-209ENST00000513761 KNSTRNQ9Y448 316 aa10.13□□□□□ -0.79
CLCN3-209ENST00000513761 NEUROD2Q15784 382 aa10.13□□□□□ -0.79
CLCN3-209ENST00000513761 TRIM44Q96DX7 344 aaPredicted RBP10.12□□□□□ -0.79
CLCN3-209ENST00000513761 NAP1L5Q96NT1 182 aaPredicted RBP10.12□□□□□ -0.79
CLCN3-209ENST00000513761 NUDCQ9Y266 331 aa10.12□□□□□ -0.79
CLCN3-209ENST00000513761 L3MBTL2Q969R5 705 aa10.12□□□□□ -0.79
CLCN3-209ENST00000513761 RCAN3Q9UKA8 241 aa10.12□□□□□ -0.79
CLCN3-209ENST00000513761 MPHOSPH9Q99550 1183 aa10.11□□□□□ -0.79
CLCN3-209ENST00000513761 DCAF11Q8TEB1 546 aa10.11□□□□□ -0.79
CLCN3-209ENST00000513761 FRAT1Q92837 279 aaPredicted RBP10.1□□□□□ -0.79
CLCN3-209ENST00000513761 TCERG1O14776 1098 aaKnown RBP10.09□□□□□ -0.79
CLCN3-209ENST00000513761 SENP3Q9H4L4 574 aaPredicted RBP10.09□□□□□ -0.79
CLCN3-209ENST00000513761 SPRYD3Q8NCJ5 442 aa10.08□□□□□ -0.8
CLCN3-209ENST00000513761 PRKRIP1Q9H875 184 aaPredicted RBP10.07□□□□□ -0.8
CLCN3-209ENST00000513761 PLEKHD1A6NEE1 506 aa10.06□□□□□ -0.8
CLCN3-209ENST00000513761 CHMP7Q8WUX9 453 aaPredicted RBP10.06□□□□□ -0.8
CLCN3-209ENST00000513761 PKD2Q13563 968 aa10.06□□□□□ -0.8
CLCN3-209ENST00000513761 NCLP19338 710 aaKnown RBP10.05□□□□□ -0.8
CLCN3-209ENST00000513761 FHOD3Q2V2M9 1422 aa10.05□□□□□ -0.8
CLCN3-209ENST00000513761 TNNT2P45379 298 aaPredicted RBP10.05□□□□□ -0.8
CLCN3-209ENST00000513761 FMN1Q68DA7 1419 aa10.05□□□□□ -0.8
CLCN3-209ENST00000513761 FTSJ3Q8IY81 847 aaKnown RBP10.05□□□□□ -0.8
CLCN3-209ENST00000513761 SLC4A3P48751 1232 aa10.04□□□□□ -0.8
CLCN3-209ENST00000513761 ZBED9Q6R2W3 1325 aa10.04□□□□□ -0.8
CLCN3-209ENST00000513761 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
CLCN3-209ENST00000513761 KIF21BO75037 1637 aa10.04□□□□□ -0.8
CLCN3-209ENST00000513761 EXOC6Q8TAG9 804 aa10.03□□□□□ -0.8
CLCN3-209ENST00000513761 PDE4AP27815 886 aa10.02□□□□□ -0.8
CLCN3-209ENST00000513761 EIF4G1Q04637 1599 aaKnown RBP10.02□□□□□ -0.8
CLCN3-209ENST00000513761 KTN1Q86UP2 1357 aaKnown RBP10.02□□□□□ -0.81
CLCN3-209ENST00000513761 GOLGA6L22H0YM25 854 aa10.02□□□□□ -0.81
CLCN3-209ENST00000513761 CDCA8Q53HL2 280 aa10.01□□□□□ -0.81
CLCN3-209ENST00000513761 MYH16Q9H6N6 1097 aa10.01□□□□□ -0.81
CLCN3-209ENST00000513761 ARID4BQ4LE39 1312 aaPredicted RBP10.01□□□□□ -0.81
CLCN3-209ENST00000513761 PLIN1O60240 522 aa10.01□□□□□ -0.81
CLCN3-209ENST00000513761 GZF1Q9H116 711 aaPredicted RBP10.01□□□□□ -0.81
CLCN3-209ENST00000513761 TMF1P82094 1093 aa10.01□□□□□ -0.81
CLCN3-209ENST00000513761 SMARCA4P51532 1647 aa10.01□□□□□ -0.81
CLCN3-209ENST00000513761 SMARCA2P51531 1590 aa10.01□□□□□ -0.81
CLCN3-209ENST00000513761 RALBP1Q15311 655 aa10□□□□□ -0.81
CLCN3-209ENST00000513761 L1TD1Q5T7N2 865 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms