RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 NPM1P06748 294 aaKnown RBP eCLIP28.6■■■□□ 2.17
DDR1-269ENST00000512725 FAM69CQ0P6D2 419 aa28.6■■■□□ 2.17
DDR1-269ENST00000512725 ABCC10Q5T3U5 1492 aa28.46■■■□□ 2.15
DDR1-269ENST00000512725 RUSC2Q8N2Y8 1516 aa28.45■■■□□ 2.15
DDR1-269ENST00000512725 DIP2BQ9P265 1576 aa28.38■■■□□ 2.13
DDR1-269ENST00000512725 MAPKBP1O60336 1514 aa28.38■■■□□ 2.13
DDR1-269ENST00000512725 ADCY10Q96PN6 1610 aa28.37■■■□□ 2.13
DDR1-269ENST00000512725 TSPOAP1O95153 1857 aa28.35■■■□□ 2.13
DDR1-269ENST00000512725 TTBK1Q5TCY1 1321 aaPredicted RBP28.35■■■□□ 2.13
DDR1-269ENST00000512725 KDM6BO15054 1643 aa28.33■■■□□ 2.13
DDR1-269ENST00000512725 KDM4FA0A1W2PPD8 638 aa28.27■■■□□ 2.12
DDR1-269ENST00000512725 KIAA0586Q9BVV6 1533 aa28.26■■■□□ 2.11
DDR1-269ENST00000512725 IGF1RP08069 1367 aa28.2■■■□□ 2.1
DDR1-269ENST00000512725 PTPRGP23470 1445 aa28.18■■■□□ 2.1
DDR1-269ENST00000512725 KIF27Q86VH2 1401 aa28.17■■■□□ 2.1
DDR1-269ENST00000512725 CUL7Q14999 1698 aa28.16■■■□□ 2.1
DDR1-269ENST00000512725 CARMIL2Q6F5E8 1435 aa28.08■■■□□ 2.09
DDR1-269ENST00000512725 TNIKQ9UKE5 1360 aa28.06■■■□□ 2.08
DDR1-269ENST00000512725 CARMIL1Q5VZK9 1371 aa28.05■■■□□ 2.08
DDR1-269ENST00000512725 ABCC2Q92887 1545 aa28.03■■■□□ 2.08
DDR1-269ENST00000512725 ASXL2Q76L83 1435 aa28.03■■■□□ 2.08
DDR1-269ENST00000512725 ILDR1Q86SU0 546 aaPredicted RBP28■■■□□ 2.07
DDR1-269ENST00000512725 PLB1Q6P1J6 1458 aa27.99■■■□□ 2.07
DDR1-269ENST00000512725 IQGAP2Q13576 1575 aa27.95■■■□□ 2.07
DDR1-269ENST00000512725 PPRC1Q5VV67 1664 aaKnown RBP27.94■■■□□ 2.06
DDR1-269ENST00000512725 ADGRL1O94910 1474 aa27.93■■■□□ 2.06
DDR1-269ENST00000512725 GLI2P10070 1586 aa27.92■■■□□ 2.06
DDR1-269ENST00000512725 UACAQ9BZF9 1416 aa27.91■■■□□ 2.06
DDR1-269ENST00000512725 UHRF1BP1LA0JNW5 1464 aa27.87■■■□□ 2.05
DDR1-269ENST00000512725 EPRSP07814 1512 aaKnown RBP27.83■■■□□ 2.05
DDR1-269ENST00000512725 DISP1Q96F81 1524 aa27.82■■■□□ 2.04
DDR1-269ENST00000512725 COL17A1Q9UMD9 1497 aaPredicted RBP27.81■■■□□ 2.04
DDR1-269ENST00000512725 TEX14Q8IWB6 1497 aa27.79■■■□□ 2.04
DDR1-269ENST00000512725 ZCCHC11Q5TAX3 1644 aaKnown RBP27.78■■■□□ 2.04
DDR1-269ENST00000512725 MAP3K4Q9Y6R4 1608 aa27.78■■■□□ 2.04
DDR1-269ENST00000512725 KDM5BQ9UGL1 1544 aa27.77■■■□□ 2.04
DDR1-269ENST00000512725 RAPGEF2Q9Y4G8 1499 aa27.71■■■□□ 2.03
DDR1-269ENST00000512725 HECW2Q9P2P5 1572 aa27.7■■■□□ 2.03
DDR1-269ENST00000512725 UGGT2Q9NYU1 1516 aa27.7■■■□□ 2.02
DDR1-269ENST00000512725 KIAA0556O60303 1618 aa27.69■■■□□ 2.02
DDR1-269ENST00000512725 KCNH8Q96L42 1107 aa27.66■■■□□ 2.02
DDR1-269ENST00000512725 WDR7Q9Y4E6 1490 aa27.65■■■□□ 2.02
DDR1-269ENST00000512725 CD109Q6YHK3 1445 aa27.58■■■□□ 2.01
DDR1-269ENST00000512725 CTTNBP2Q8WZ74 1663 aa27.52■■■□□ 2
DDR1-269ENST00000512725 CFAP43Q8NDM7 1665 aa27.51■■□□□ 1.99
DDR1-269ENST00000512725 GOLGA3Q08378 1498 aa27.5■■□□□ 1.99
DDR1-269ENST00000512725 ARID3CA6NKF2 412 aa27.49■■□□□ 1.99
DDR1-269ENST00000512725 MAGI3Q5TCQ9 1506 aa27.49■■□□□ 1.99
DDR1-269ENST00000512725 KIF21BO75037 1637 aa27.45■■□□□ 1.98
DDR1-269ENST00000512725 ABCA8O94911 1581 aa27.44■■□□□ 1.98
DDR1-269ENST00000512725 FAM9AQ8IZU1 332 aaPredicted RBP27.42■■□□□ 1.98
DDR1-269ENST00000512725 P3H3Q8IVL6 736 aa27.39■■□□□ 1.98
DDR1-269ENST00000512725 ARAP3Q8WWN8 1544 aa27.29■■□□□ 1.96
DDR1-269ENST00000512725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.28■■□□□ 1.96
DDR1-269ENST00000512725 HNRNPUL2Q1KMD3 747 aaKnown RBP27.28■■□□□ 1.96
DDR1-269ENST00000512725 FBXO41Q8TF61 875 aa27.28■■□□□ 1.96
DDR1-269ENST00000512725 ARID4BQ4LE39 1312 aaPredicted RBP27.26■■□□□ 1.95
DDR1-269ENST00000512725 RAPGEF3O95398 923 aa27.26■■□□□ 1.95
DDR1-269ENST00000512725 ATP10BO94823 1461 aa27.25■■□□□ 1.95
DDR1-269ENST00000512725 PRXQ9BXM0 1461 aa27.23■■□□□ 1.95
DDR1-269ENST00000512725 PTPRMP28827 1452 aa27.22■■□□□ 1.95
DDR1-269ENST00000512725 PHLDB1Q86UU1 1377 aa27.19■■□□□ 1.94
DDR1-269ENST00000512725 ABCA9Q8IUA7 1624 aa27.19■■□□□ 1.94
DDR1-269ENST00000512725 ADAMTSL3P82987 1691 aa27.17■■□□□ 1.94
DDR1-269ENST00000512725 RANGAP1P46060 587 aaPredicted RBP27.15■■□□□ 1.94
DDR1-269ENST00000512725 PLPPR3Q6T4P5 718 aa27.13■■□□□ 1.93
DDR1-269ENST00000512725 NEO1Q92859 1461 aa27.11■■□□□ 1.93
DDR1-269ENST00000512725 RAPGEF6Q8TEU7 1601 aa27.1■■□□□ 1.93
DDR1-269ENST00000512725 BCORL1Q5H9F3 1711 aa27.1■■□□□ 1.93
DDR1-269ENST00000512725 MADDQ8WXG6 1647 aa27.09■■□□□ 1.93
DDR1-269ENST00000512725 PCF11O94913 1555 aaKnown RBP27.05■■□□□ 1.92
DDR1-269ENST00000512725 FRMPD1Q5SYB0 1578 aa27.05■■□□□ 1.92
DDR1-269ENST00000512725 SAMD9Q5K651 1589 aa27.03■■□□□ 1.92
DDR1-269ENST00000512725 RIMS1Q86UR5 1692 aaKnown RBP27.01■■□□□ 1.92
DDR1-269ENST00000512725 CSRNP3Q8WYN3 585 aa27■■□□□ 1.91
DDR1-269ENST00000512725 LMTK3Q96Q04 1460 aa26.99■■□□□ 1.91
DDR1-269ENST00000512725 PLEKHD1A6NEE1 506 aa26.98■■□□□ 1.91
DDR1-269ENST00000512725 HSPA2P54652 639 aa26.98■■□□□ 1.91
DDR1-269ENST00000512725 DENND4BO75064 1496 aaPredicted RBP26.98■■□□□ 1.91
DDR1-269ENST00000512725 NUP153P49790 1475 aaKnown RBP26.97■■□□□ 1.91
DDR1-269ENST00000512725 ARHGEF40Q8TER5 1519 aa26.95■■□□□ 1.91
DDR1-269ENST00000512725 FHOD3Q2V2M9 1422 aa26.95■■□□□ 1.9
DDR1-269ENST00000512725 AKNAQ7Z591 1439 aa26.94■■□□□ 1.9
DDR1-269ENST00000512725 MLECQ14165 292 aa26.92■■□□□ 1.9
DDR1-269ENST00000512725 FANCAO15360 1455 aa26.91■■□□□ 1.9
DDR1-269ENST00000512725 RICTORQ6R327 1708 aa26.9■■□□□ 1.9
DDR1-269ENST00000512725 POGZQ7Z3K3 1410 aa26.9■■□□□ 1.9
DDR1-269ENST00000512725 CFAP74Q9C0B2 1584 aa26.88■■□□□ 1.89
DDR1-269ENST00000512725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.84■■□□□ 1.899e-7■■■□□ 17.5
DDR1-269ENST00000512725 ZFYVE16Q7Z3T8 1539 aa26.83■■□□□ 1.89
DDR1-269ENST00000512725 YEATS2Q9ULM3 1422 aa26.82■■□□□ 1.88
DDR1-269ENST00000512725 TTC37Q6PGP7 1564 aa26.81■■□□□ 1.88
DDR1-269ENST00000512725 EFCAB5A4FU69 1503 aa26.8■■□□□ 1.88
DDR1-269ENST00000512725 CERKQ8TCT0 537 aa26.78■■□□□ 1.88
DDR1-269ENST00000512725 ATP1B4Q9UN42 357 aaPredicted RBP26.78■■□□□ 1.88
DDR1-269ENST00000512725 ZMYM4Q5VZL5 1548 aa26.77■■□□□ 1.88
DDR1-269ENST00000512725 FER1L4A9Z1Z3 1794 aa26.76■■□□□ 1.88
DDR1-269ENST00000512725 SIGLEC1Q9BZZ2 1709 aa26.76■■□□□ 1.88
DDR1-269ENST00000512725 HECW1Q76N89 1606 aa26.75■■□□□ 1.87
DDR1-269ENST00000512725 SCAPERQ9BY12 1400 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms