RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 TSPY4P0CV99 314 aa18.92■□□□□ 0.62
TRIO-218ENST00000512070 TSPY10P0CW01 314 aa18.92■□□□□ 0.62
TRIO-218ENST00000512070 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
TRIO-218ENST00000512070 EIF4G2P78344 907 aaKnown RBP eCLIP18.9■□□□□ 0.62
TRIO-218ENST00000512070 P3H3Q8IVL6 736 aa18.89■□□□□ 0.61
TRIO-218ENST00000512070 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
TRIO-218ENST00000512070 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
TRIO-218ENST00000512070 DNTTIP2Q5QJE6 756 aaKnown RBP18.87■□□□□ 0.61
TRIO-218ENST00000512070 EEA1Q15075 1411 aa18.87■□□□□ 0.61
TRIO-218ENST00000512070 CFAP53Q96M91 514 aa18.86■□□□□ 0.61
TRIO-218ENST00000512070 ARXQ96QS3 562 aa18.86■□□□□ 0.61
TRIO-218ENST00000512070 CFAP44Q96MT7 982 aa18.85■□□□□ 0.61
TRIO-218ENST00000512070 MS4A1P11836 297 aa18.85■□□□□ 0.61
TRIO-218ENST00000512070 CHAF1AQ13111 956 aaPredicted RBP18.83■□□□□ 0.6
TRIO-218ENST00000512070 L1TD1Q5T7N2 865 aaKnown RBP18.82■□□□□ 0.6
TRIO-218ENST00000512070 FTSJ3Q8IY81 847 aaKnown RBP18.78■□□□□ 0.6
TRIO-218ENST00000512070 SALL2Q9Y467 1007 aaPredicted RBP18.78■□□□□ 0.6
TRIO-218ENST00000512070 ARID3CA6NKF2 412 aa18.74■□□□□ 0.59
TRIO-218ENST00000512070 PNNQ9H307 717 aaKnown RBP18.74■□□□□ 0.59
TRIO-218ENST00000512070 CLIP1P30622 1438 aa18.73■□□□□ 0.59
TRIO-218ENST00000512070 PTMSP20962 102 aa18.73■□□□□ 0.59
TRIO-218ENST00000512070 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
TRIO-218ENST00000512070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.68■□□□□ 0.587e-7■■□□□ 14.1
TRIO-218ENST00000512070 GOLGA3Q08378 1498 aa18.68■□□□□ 0.58
TRIO-218ENST00000512070 NAP1L5Q96NT1 182 aaPredicted RBP18.67■□□□□ 0.58
TRIO-218ENST00000512070 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.58
TRIO-218ENST00000512070 HAP1P54257 671 aaPredicted RBP18.64■□□□□ 0.58
TRIO-218ENST00000512070 NUDCQ9Y266 331 aa18.64■□□□□ 0.57
TRIO-218ENST00000512070 PPP4R2Q9NY27 417 aa18.63■□□□□ 0.57
TRIO-218ENST00000512070 KDM2AQ9Y2K7 1162 aa18.63■□□□□ 0.57
TRIO-218ENST00000512070 NOP58Q9Y2X3 529 aaKnown RBP18.62■□□□□ 0.57
TRIO-218ENST00000512070 MSNP26038 577 aaKnown RBP18.62■□□□□ 0.57
TRIO-218ENST00000512070 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
TRIO-218ENST00000512070 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
TRIO-218ENST00000512070 MIER1Q8N108 512 aa18.6■□□□□ 0.57
TRIO-218ENST00000512070 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
TRIO-218ENST00000512070 MCCP23508 829 aa18.59■□□□□ 0.57
TRIO-218ENST00000512070 CHIC2Q9UKJ5 165 aa18.58■□□□□ 0.57
TRIO-218ENST00000512070 NACADO15069 1562 aa18.58■□□□□ 0.57
TRIO-218ENST00000512070 GOLGA6L4A6NEF3 574 aa18.57■□□□□ 0.56
TRIO-218ENST00000512070 USP35Q9P2H5 1018 aa18.57■□□□□ 0.56
TRIO-218ENST00000512070 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
TRIO-218ENST00000512070 HSCBQ8IWL3 235 aa18.56■□□□□ 0.56
TRIO-218ENST00000512070 FGD1P98174 961 aa18.56■□□□□ 0.56
TRIO-218ENST00000512070 ARID4BQ4LE39 1312 aaPredicted RBP18.54■□□□□ 0.56
TRIO-218ENST00000512070 KCNJ4P48050 445 aa18.5■□□□□ 0.55
TRIO-218ENST00000512070 KIAA2012Q0VF49 1180 aa18.49■□□□□ 0.55
TRIO-218ENST00000512070 IRX6P78412 446 aaPredicted RBP18.49■□□□□ 0.55
TRIO-218ENST00000512070 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
TRIO-218ENST00000512070 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
TRIO-218ENST00000512070 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
TRIO-218ENST00000512070 C14orf37Q86TY3 774 aa18.47■□□□□ 0.55
TRIO-218ENST00000512070 TIMELESSQ9UNS1 1208 aa18.47■□□□□ 0.55
TRIO-218ENST00000512070 SYAP1Q96A49 352 aaPredicted RBP18.47■□□□□ 0.55
TRIO-218ENST00000512070 PLEKHD1A6NEE1 506 aa18.47■□□□□ 0.55
TRIO-218ENST00000512070 HTATSF1O43719 755 aaKnown RBP18.47■□□□□ 0.55
TRIO-218ENST00000512070 CEP162Q5TB80 1403 aa18.46■□□□□ 0.55
TRIO-218ENST00000512070 FHAD1B1AJZ9 1412 aa18.46■□□□□ 0.55
TRIO-218ENST00000512070 CCDC34Q96HJ3 373 aa18.45■□□□□ 0.54
TRIO-218ENST00000512070 A0A0G2JS52 829 aa18.45■□□□□ 0.54
TRIO-218ENST00000512070 OS9Q13438 667 aaPredicted RBP18.44■□□□□ 0.54
TRIO-218ENST00000512070 SUPT16HQ9Y5B9 1047 aaKnown RBP18.44■□□□□ 0.54
TRIO-218ENST00000512070 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
TRIO-218ENST00000512070 GBP4Q96PP9 640 aa18.44■□□□□ 0.54
TRIO-218ENST00000512070 PLCB2Q00722 1185 aa18.44■□□□□ 0.54
TRIO-218ENST00000512070 CARD11Q9BXL7 1154 aa18.43■□□□□ 0.54
TRIO-218ENST00000512070 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
TRIO-218ENST00000512070 DRC7Q8IY82 874 aa18.4■□□□□ 0.54
TRIO-218ENST00000512070 CALD1Q05682 793 aaKnown RBP18.39■□□□□ 0.53
TRIO-218ENST00000512070 KANK1Q14678 1352 aa18.37■□□□□ 0.53
TRIO-218ENST00000512070 IPO8O15397 1037 aaKnown RBP18.36■□□□□ 0.53
TRIO-218ENST00000512070 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
TRIO-218ENST00000512070 CCER2I3L3R5 266 aa18.36■□□□□ 0.53
TRIO-218ENST00000512070 TPM4P67936 248 aa18.35■□□□□ 0.53
TRIO-218ENST00000512070 RGS3P49796 1198 aa18.35■□□□□ 0.53
TRIO-218ENST00000512070 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
TRIO-218ENST00000512070 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
TRIO-218ENST00000512070 CSPP1Q1MSJ5 1256 aa18.34■□□□□ 0.53
TRIO-218ENST00000512070 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
TRIO-218ENST00000512070 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
TRIO-218ENST00000512070 NPHP1O15259 732 aa18.34■□□□□ 0.53
TRIO-218ENST00000512070 KIAA1211Q6ZU35 1233 aa18.34■□□□□ 0.53
TRIO-218ENST00000512070 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.53
TRIO-218ENST00000512070 HDAC5Q9UQL6 1122 aa18.33■□□□□ 0.52
TRIO-218ENST00000512070 GOLGA6L1Q8N7Z2 621 aa18.33■□□□□ 0.52
TRIO-218ENST00000512070 GNL2Q13823 731 aaKnown RBP18.33■□□□□ 0.52
TRIO-218ENST00000512070 TMF1P82094 1093 aa18.32■□□□□ 0.52
TRIO-218ENST00000512070 TNIKQ9UKE5 1360 aa18.32■□□□□ 0.52
TRIO-218ENST00000512070 PHF14O94880 888 aa18.31■□□□□ 0.52
TRIO-218ENST00000512070 ZBTB7CA1YPR0 619 aa18.31■□□□□ 0.52
TRIO-218ENST00000512070 FRAT1Q92837 279 aaPredicted RBP18.31■□□□□ 0.52
TRIO-218ENST00000512070 POGKQ9P215 609 aa18.31■□□□□ 0.52
TRIO-218ENST00000512070 NOC3LQ8WTT2 800 aaKnown RBP18.29■□□□□ 0.52
TRIO-218ENST00000512070 NAP1L2Q9ULW6 460 aaPredicted RBP18.28■□□□□ 0.52
TRIO-218ENST00000512070 WRNQ14191 1432 aaPredicted RBP eCLIP18.26■□□□□ 0.51
TRIO-218ENST00000512070 TNNT3P45378 269 aaPredicted RBP18.25■□□□□ 0.51
TRIO-218ENST00000512070 RGL3Q3MIN7 710 aa18.24■□□□□ 0.51
TRIO-218ENST00000512070 GPATCH3Q96I76 525 aa18.23■□□□□ 0.51
TRIO-218ENST00000512070 BAZ1BQ9UIG0 1483 aaKnown RBP18.23■□□□□ 0.51
TRIO-218ENST00000512070 KTN1Q86UP2 1357 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms