RNA–Protein interactions for RNA: ENST00000510539.2

SNX18P25-201, Transcript of sorting nexin 18 pseudogene 25, humanhuman

BASIC

Gene SNX18P25, Length 758 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P25-201ENST00000510539 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
SNX18P25-201ENST00000510539 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
SNX18P25-201ENST00000510539 CREBZFQ9NS37 354 aa12.48□□□□□ -0.41
SNX18P25-201ENST00000510539 PITPNM1O00562 1244 aa12.46□□□□□ -0.41
SNX18P25-201ENST00000510539 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
SNX18P25-201ENST00000510539 GSE1Q14687 1217 aa12.44□□□□□ -0.42
SNX18P25-201ENST00000510539 NCAPD3P42695 1498 aa12.43□□□□□ -0.42
SNX18P25-201ENST00000510539 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
SNX18P25-201ENST00000510539 NUBP1P53384 320 aa12.42□□□□□ -0.42
SNX18P25-201ENST00000510539 RGL2O15211 777 aa12.41□□□□□ -0.42
SNX18P25-201ENST00000510539 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
SNX18P25-201ENST00000510539 NESP48681 1621 aa12.37□□□□□ -0.43
SNX18P25-201ENST00000510539 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
SNX18P25-201ENST00000510539 DCAF8Q5TAQ9 597 aa12.36□□□□□ -0.43
SNX18P25-201ENST00000510539 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
SNX18P25-201ENST00000510539 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNX18P25-201ENST00000510539 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
SNX18P25-201ENST00000510539 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
SNX18P25-201ENST00000510539 HMGXB3Q12766 1538 aa12.31□□□□□ -0.44
SNX18P25-201ENST00000510539 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
SNX18P25-201ENST00000510539 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
SNX18P25-201ENST00000510539 RASEFQ8IZ41 740 aa12.26□□□□□ -0.45
SNX18P25-201ENST00000510539 HAP1P54257 671 aaPredicted RBP12.25□□□□□ -0.45
SNX18P25-201ENST00000510539 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
SNX18P25-201ENST00000510539 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
SNX18P25-201ENST00000510539 BAZ1BQ9UIG0 1483 aaKnown RBP12.24□□□□□ -0.45
SNX18P25-201ENST00000510539 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
SNX18P25-201ENST00000510539 CHRM1P11229 460 aaPredicted RBP12.22□□□□□ -0.45
SNX18P25-201ENST00000510539 CHADLQ6NUI6 762 aa12.22□□□□□ -0.45
SNX18P25-201ENST00000510539 RNF25Q96BH1 459 aaPredicted RBP12.21□□□□□ -0.45
SNX18P25-201ENST00000510539 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
SNX18P25-201ENST00000510539 RIOK3O14730 519 aaKnown RBP12.2□□□□□ -0.46
SNX18P25-201ENST00000510539 PAXIP1Q6ZW49 1069 aaPredicted RBP12.18□□□□□ -0.46
SNX18P25-201ENST00000510539 HS6ST3Q8IZP7 471 aa12.18□□□□□ -0.46
SNX18P25-201ENST00000510539 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
SNX18P25-201ENST00000510539 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
SNX18P25-201ENST00000510539 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
SNX18P25-201ENST00000510539 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
SNX18P25-201ENST00000510539 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
SNX18P25-201ENST00000510539 BAZ1AQ9NRL2 1556 aaPredicted RBP12.15□□□□□ -0.46
SNX18P25-201ENST00000510539 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
SNX18P25-201ENST00000510539 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
SNX18P25-201ENST00000510539 VGFO15240 615 aaPredicted RBP12.13□□□□□ -0.47
SNX18P25-201ENST00000510539 PYGBP11216 843 aa12.12□□□□□ -0.47
SNX18P25-201ENST00000510539 CHRDL2Q6WN34 429 aa12.12□□□□□ -0.47
SNX18P25-201ENST00000510539 PEG3Q9GZU2 1588 aa12.1□□□□□ -0.47
SNX18P25-201ENST00000510539 VSIG10Q8N0Z9 540 aa12.1□□□□□ -0.47
SNX18P25-201ENST00000510539 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
SNX18P25-201ENST00000510539 MRC2Q9UBG0 1479 aa12.09□□□□□ -0.47
SNX18P25-201ENST00000510539 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
SNX18P25-201ENST00000510539 STK25O00506 426 aa12.06□□□□□ -0.48
SNX18P25-201ENST00000510539 WDR62O43379 1518 aa12.06□□□□□ -0.48
SNX18P25-201ENST00000510539 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
SNX18P25-201ENST00000510539 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
SNX18P25-201ENST00000510539 MROH2BQ7Z745 1585 aa12.04□□□□□ -0.48
SNX18P25-201ENST00000510539 PAK3O75914 559 aaPredicted RBP12.02□□□□□ -0.49
SNX18P25-201ENST00000510539 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
SNX18P25-201ENST00000510539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12□□□□□ -0.49
SNX18P25-201ENST00000510539 ZFP91Q96JP5 570 aaPredicted RBP12□□□□□ -0.49
SNX18P25-201ENST00000510539 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
SNX18P25-201ENST00000510539 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
SNX18P25-201ENST00000510539 BCL11BQ9C0K0 894 aaPredicted RBP11.98□□□□□ -0.49
SNX18P25-201ENST00000510539 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
SNX18P25-201ENST00000510539 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
SNX18P25-201ENST00000510539 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
SNX18P25-201ENST00000510539 RYDENQ9NUL5 291 aaKnown RBP11.93□□□□□ -0.5
SNX18P25-201ENST00000510539 FANCD2Q9BXW9 1451 aa11.93□□□□□ -0.5
SNX18P25-201ENST00000510539 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
SNX18P25-201ENST00000510539 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
SNX18P25-201ENST00000510539 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
SNX18P25-201ENST00000510539 GTPBP6O43824 516 aaPredicted RBP11.91□□□□□ -0.5
SNX18P25-201ENST00000510539 PCDHB8Q9UN66 801 aa11.89□□□□□ -0.51
SNX18P25-201ENST00000510539 PCDHB13Q9Y5F0 798 aa11.89□□□□□ -0.51
SNX18P25-201ENST00000510539 RIMBP3CA6NJZ7 1639 aa11.88□□□□□ -0.51
SNX18P25-201ENST00000510539 RIMBP3BA6NNM3 1639 aa11.88□□□□□ -0.51
SNX18P25-201ENST00000510539 RIMBP3Q9UFD9 1639 aa11.88□□□□□ -0.51
SNX18P25-201ENST00000510539 BCANQ96GW7 911 aa11.86□□□□□ -0.51
SNX18P25-201ENST00000510539 WIZO95785 1651 aa11.85□□□□□ -0.51
SNX18P25-201ENST00000510539 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
SNX18P25-201ENST00000510539 PSEN1P49768 467 aa11.85□□□□□ -0.51
SNX18P25-201ENST00000510539 KIF12Q96FN5 646 aa11.85□□□□□ -0.51
SNX18P25-201ENST00000510539 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
SNX18P25-201ENST00000510539 URB2Q14146 1524 aaKnown RBP11.84□□□□□ -0.51
SNX18P25-201ENST00000510539 CFTRP13569 1480 aa11.83□□□□□ -0.52
SNX18P25-201ENST00000510539 MAP3K13O43283 966 aa11.83□□□□□ -0.52
SNX18P25-201ENST00000510539 ARHGEF11O15085 1522 aa11.82□□□□□ -0.52
SNX18P25-201ENST00000510539 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
SNX18P25-201ENST00000510539 CYB5RLQ6IPT4 315 aa11.77□□□□□ -0.53
SNX18P25-201ENST00000510539 ZNF608Q9ULD9 1512 aaPredicted RBP11.76□□□□□ -0.53
SNX18P25-201ENST00000510539 IFT140Q96RY7 1462 aa11.75□□□□□ -0.53
SNX18P25-201ENST00000510539 PHF12Q96QT6 1004 aa11.74□□□□□ -0.53
SNX18P25-201ENST00000510539 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
SNX18P25-201ENST00000510539 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
SNX18P25-201ENST00000510539 TOP2AP11388 1531 aaKnown RBP11.7□□□□□ -0.54
SNX18P25-201ENST00000510539 MFRPQ9BY79 579 aa11.69□□□□□ -0.54
SNX18P25-201ENST00000510539 CABP2Q9NPB3 220 aa11.69□□□□□ -0.54
SNX18P25-201ENST00000510539 ARAP1Q96P48 1450 aa11.69□□□□□ -0.54
SNX18P25-201ENST00000510539 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
SNX18P25-201ENST00000510539 SOX12O15370 315 aa11.67□□□□□ -0.54
SNX18P25-201ENST00000510539 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms