RNA–Protein interactions for RNA: ENST00000510297.1

CDH18-209, Transcript of cadherin 18, humanhuman

TSL 3

Gene CDH18, Length 899 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-209ENST00000510297 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
CDH18-209ENST00000510297 ASTLQ6HA08 431 aaPredicted RBP11.41□□□□□ -0.58
CDH18-209ENST00000510297 ATMINO43313 823 aaPredicted RBP11.39□□□□□ -0.59
CDH18-209ENST00000510297 NPM1P06748 294 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDH18-209ENST00000510297 LCE2DQ5TA82 110 aaPredicted RBP11.37□□□□□ -0.59
CDH18-209ENST00000510297 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
CDH18-209ENST00000510297 C7P10643 843 aa11.32□□□□□ -0.6
CDH18-209ENST00000510297 ATN1P54259 1190 aaPredicted RBP11.29□□□□□ -0.6
CDH18-209ENST00000510297 TSPYL2Q9H2G4 693 aaPredicted RBP11.29□□□□□ -0.6
CDH18-209ENST00000510297 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
CDH18-209ENST00000510297 TRPC6Q9Y210 931 aa11.26□□□□□ -0.61
CDH18-209ENST00000510297 CCDC61Q9Y6R9 512 aa11.25□□□□□ -0.61
CDH18-209ENST00000510297 FAM163AQ96GL9 167 aaPredicted RBP11.24□□□□□ -0.61
CDH18-209ENST00000510297 MAMSTRQ6ZN01 415 aa11.22□□□□□ -0.61
CDH18-209ENST00000510297 PCDH10Q9P2E7 1040 aa11.22□□□□□ -0.61
CDH18-209ENST00000510297 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
CDH18-209ENST00000510297 BMP2KQ9NSY1 1161 aaPredicted RBP11.21□□□□□ -0.61
CDH18-209ENST00000510297 EHMT2Q96KQ7 1210 aa11.19□□□□□ -0.62
CDH18-209ENST00000510297 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
CDH18-209ENST00000510297 PROM2Q8N271 834 aa11.15□□□□□ -0.62
CDH18-209ENST00000510297 MAP3K13O43283 966 aa11.13□□□□□ -0.63
CDH18-209ENST00000510297 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
CDH18-209ENST00000510297 RASEFQ8IZ41 740 aa11.1□□□□□ -0.63
CDH18-209ENST00000510297 TIE1P35590 1138 aa11.07□□□□□ -0.64
CDH18-209ENST00000510297 TTLL13PA6NNM8 815 aa11.06□□□□□ -0.64
CDH18-209ENST00000510297 CDAN1Q8IWY9 1227 aa11.01□□□□□ -0.65
CDH18-209ENST00000510297 SEC24BO95487 1268 aa11□□□□□ -0.65
CDH18-209ENST00000510297 TRIM35Q9UPQ4 493 aa10.98□□□□□ -0.65
CDH18-209ENST00000510297 MIER1Q8N108 512 aa10.97□□□□□ -0.65
CDH18-209ENST00000510297 ST18O60284 1047 aa10.93□□□□□ -0.66
CDH18-209ENST00000510297 PCDHB13Q9Y5F0 798 aa10.93□□□□□ -0.66
CDH18-209ENST00000510297 IER5LQ5T953 404 aa10.91□□□□□ -0.66
CDH18-209ENST00000510297 SLAIN1Q8ND83 568 aa10.91□□□□□ -0.66
CDH18-209ENST00000510297 IFNL1Q8IU54 200 aa10.9□□□□□ -0.66
CDH18-209ENST00000510297 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
CDH18-209ENST00000510297 NUBP1P53384 320 aa10.87□□□□□ -0.67
CDH18-209ENST00000510297 ABCC9O60706 1549 aa10.87□□□□□ -0.67
CDH18-209ENST00000510297 SGIP1Q9BQI5 828 aa10.86□□□□□ -0.67
CDH18-209ENST00000510297 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
CDH18-209ENST00000510297 PLCD3Q8N3E9 789 aa10.82□□□□□ -0.68
CDH18-209ENST00000510297 IRX5P78411 483 aaPredicted RBP10.81□□□□□ -0.68
CDH18-209ENST00000510297 PLCG2P16885 1265 aa10.8□□□□□ -0.68
CDH18-209ENST00000510297 MMRN1Q13201 1228 aa10.78□□□□□ -0.68
CDH18-209ENST00000510297 ZCCHC6Q5VYS8 1495 aaKnown RBP10.78□□□□□ -0.68
CDH18-209ENST00000510297 SPNS2Q8IVW8 549 aa10.76□□□□□ -0.69
CDH18-209ENST00000510297 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
CDH18-209ENST00000510297 MARVELD3Q96A59 401 aa10.74□□□□□ -0.69
CDH18-209ENST00000510297 MYO15BQ96JP2 1530 aa10.74□□□□□ -0.69
CDH18-209ENST00000510297 NACADO15069 1562 aa10.71□□□□□ -0.69
CDH18-209ENST00000510297 FAM212AQ96EL1 285 aa10.71□□□□□ -0.69
CDH18-209ENST00000510297 DCAF8L2P0C7V8 631 aa10.7□□□□□ -0.7
CDH18-209ENST00000510297 OCEL1Q9H607 264 aa10.7□□□□□ -0.7
CDH18-209ENST00000510297 TMEM121BQ9BXQ6 578 aaPredicted RBP10.68□□□□□ -0.7
CDH18-209ENST00000510297 RB1CC1Q8TDY2 1594 aa10.68□□□□□ -0.7
CDH18-209ENST00000510297 PYGBP11216 843 aa10.67□□□□□ -0.7
CDH18-209ENST00000510297 ZBTB47Q9UFB7 747 aaPredicted RBP10.67□□□□□ -0.7
CDH18-209ENST00000510297 PCDHB8Q9UN66 801 aa10.67□□□□□ -0.7
CDH18-209ENST00000510297 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.64□□□□□ -0.71
CDH18-209ENST00000510297 POTEB3A0JP26 581 aa10.61□□□□□ -0.71
CDH18-209ENST00000510297 POTEBQ6S5H4 581 aa10.61□□□□□ -0.71
CDH18-209ENST00000510297 PDCD7Q8N8D1 485 aaKnown RBP10.61□□□□□ -0.71
CDH18-209ENST00000510297 SNPHO15079 494 aa10.6□□□□□ -0.71
CDH18-209ENST00000510297 DCAF8Q5TAQ9 597 aa10.59□□□□□ -0.71
CDH18-209ENST00000510297 KRTAP3-3Q9BYR6 98 aa10.57□□□□□ -0.72
CDH18-209ENST00000510297 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
CDH18-209ENST00000510297 EMP3P54852 163 aa10.55□□□□□ -0.72
CDH18-209ENST00000510297 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
CDH18-209ENST00000510297 C3orf67Q6ZVT6 689 aa10.51□□□□□ -0.73
CDH18-209ENST00000510297 FAM205CA6NFA0 338 aa10.5□□□□□ -0.73
CDH18-209ENST00000510297 FKBP8Q14318 412 aa10.49□□□□□ -0.73
CDH18-209ENST00000510297 MKRN3Q13064 507 aaKnown RBP10.44□□□□□ -0.74
CDH18-209ENST00000510297 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
CDH18-209ENST00000510297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH18-209ENST00000510297 DPY19L2Q6NUT2 758 aa10.43□□□□□ -0.74
CDH18-209ENST00000510297 GOLGA2Q08379 1002 aa10.41□□□□□ -0.74
CDH18-209ENST00000510297 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
CDH18-209ENST00000510297 HOXB3P14651 431 aaPredicted RBP10.39□□□□□ -0.75
CDH18-209ENST00000510297 PSEN1P49768 467 aa10.39□□□□□ -0.75
CDH18-209ENST00000510297 ILDR1Q86SU0 546 aaPredicted RBP10.39□□□□□ -0.75
CDH18-209ENST00000510297 SCRIBQ14160 1630 aa10.36□□□□□ -0.75
CDH18-209ENST00000510297 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
CDH18-209ENST00000510297 GSE1Q14687 1217 aa10.33□□□□□ -0.76
CDH18-209ENST00000510297 SHROOM4Q9ULL8 1493 aa10.32□□□□□ -0.76
CDH18-209ENST00000510297 KLHL34Q8N239 644 aa10.31□□□□□ -0.76
CDH18-209ENST00000510297 HOXB1P14653 301 aaPredicted RBP10.29□□□□□ -0.76
CDH18-209ENST00000510297 CABP2Q9NPB3 220 aa10.29□□□□□ -0.76
CDH18-209ENST00000510297 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
CDH18-209ENST00000510297 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
CDH18-209ENST00000510297 UNC13AQ9UPW8 1703 aa10.27□□□□□ -0.76
CDH18-209ENST00000510297 PDAP1Q13442 181 aaKnown RBP10.27□□□□□ -0.77
CDH18-209ENST00000510297 FBXO3Q9UK99 471 aa10.27□□□□□ -0.77
CDH18-209ENST00000510297 ERBB3P21860 1342 aa10.25□□□□□ -0.77
CDH18-209ENST00000510297 RNF166Q96A37 237 aaPredicted RBP10.24□□□□□ -0.77
CDH18-209ENST00000510297 ZNF710Q8N1W2 664 aa10.23□□□□□ -0.77
CDH18-209ENST00000510297 VARS2Q5ST30 1063 aaKnown RBP10.21□□□□□ -0.77
CDH18-209ENST00000510297 G3V3G9 751 aa10.2□□□□□ -0.78
CDH18-209ENST00000510297 DOK7Q18PE1 504 aa10.19□□□□□ -0.78
CDH18-209ENST00000510297 TMEM92Q6UXU6 159 aa10.18□□□□□ -0.78
CDH18-209ENST00000510297 BICRAQ9NZM4 1560 aa10.18□□□□□ -0.78
CDH18-209ENST00000510297 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms