RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 BIVM-ERCC5R4GMW8 1640 aa18.35■□□□□ 0.53
MBD4-208ENST00000509828 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.52
MBD4-208ENST00000509828 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
MBD4-208ENST00000509828 KIF13AQ9H1H9 1805 aa18.26■□□□□ 0.51
MBD4-208ENST00000509828 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
MBD4-208ENST00000509828 MAPKBP1O60336 1514 aa18.18■□□□□ 0.5
MBD4-208ENST00000509828 KIAA0586Q9BVV6 1533 aa18.17■□□□□ 0.5
MBD4-208ENST00000509828 IGF1RP08069 1367 aa18.16■□□□□ 0.5
MBD4-208ENST00000509828 PTPRGP23470 1445 aa18.15■□□□□ 0.5
MBD4-208ENST00000509828 KIF27Q86VH2 1401 aa18.15■□□□□ 0.5
MBD4-208ENST00000509828 DIP2BQ9P265 1576 aa18.14■□□□□ 0.49
MBD4-208ENST00000509828 ADCY10Q96PN6 1610 aa18.14■□□□□ 0.49
MBD4-208ENST00000509828 KDM6BO15054 1643 aa18.13■□□□□ 0.49
MBD4-208ENST00000509828 KDM4FA0A1W2PPD8 638 aa18.13■□□□□ 0.49
MBD4-208ENST00000509828 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
MBD4-208ENST00000509828 TSPOAP1O95153 1857 aa18.08■□□□□ 0.49
MBD4-208ENST00000509828 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
MBD4-208ENST00000509828 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
MBD4-208ENST00000509828 CUL7Q14999 1698 aa18.05■□□□□ 0.48
MBD4-208ENST00000509828 PLB1Q6P1J6 1458 aa18.01■□□□□ 0.47
MBD4-208ENST00000509828 ASXL2Q76L83 1435 aa18■□□□□ 0.47
MBD4-208ENST00000509828 ABCC2Q92887 1545 aa18■□□□□ 0.47
MBD4-208ENST00000509828 ILDR1Q86SU0 546 aaPredicted RBP17.95■□□□□ 0.46
MBD4-208ENST00000509828 UACAQ9BZF9 1416 aa17.95■□□□□ 0.46
MBD4-208ENST00000509828 IQGAP2Q13576 1575 aa17.92■□□□□ 0.46
MBD4-208ENST00000509828 UHRF1BP1LA0JNW5 1464 aa17.9■□□□□ 0.46
MBD4-208ENST00000509828 ADGRL1O94910 1474 aa17.89■□□□□ 0.45
MBD4-208ENST00000509828 GLI2P10070 1586 aa17.89■□□□□ 0.45
MBD4-208ENST00000509828 TEX14Q8IWB6 1497 aa17.87■□□□□ 0.45
MBD4-208ENST00000509828 EPRSP07814 1512 aaKnown RBP17.86■□□□□ 0.45
MBD4-208ENST00000509828 DISP1Q96F81 1524 aa17.84■□□□□ 0.45
MBD4-208ENST00000509828 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
MBD4-208ENST00000509828 KCNH8Q96L42 1107 aa17.84■□□□□ 0.45
MBD4-208ENST00000509828 RAPGEF2Q9Y4G8 1499 aa17.83■□□□□ 0.45
MBD4-208ENST00000509828 KDM5BQ9UGL1 1544 aa17.82■□□□□ 0.44
MBD4-208ENST00000509828 COL17A1Q9UMD9 1497 aaPredicted RBP17.81■□□□□ 0.44
MBD4-208ENST00000509828 PPRC1Q5VV67 1664 aaKnown RBP17.8■□□□□ 0.44
MBD4-208ENST00000509828 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.44
MBD4-208ENST00000509828 ZCCHC11Q5TAX3 1644 aaKnown RBP17.76■□□□□ 0.43
MBD4-208ENST00000509828 MAP3K4Q9Y6R4 1608 aa17.76■□□□□ 0.43
MBD4-208ENST00000509828 WDR7Q9Y4E6 1490 aa17.75■□□□□ 0.43
MBD4-208ENST00000509828 CD109Q6YHK3 1445 aa17.74■□□□□ 0.43
MBD4-208ENST00000509828 KIAA0556O60303 1618 aa17.74■□□□□ 0.43
MBD4-208ENST00000509828 GOLGA3Q08378 1498 aa17.71■□□□□ 0.43
MBD4-208ENST00000509828 HECW2Q9P2P5 1572 aa17.7■□□□□ 0.42
MBD4-208ENST00000509828 ARID3CA6NKF2 412 aa17.7■□□□□ 0.42
MBD4-208ENST00000509828 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
MBD4-208ENST00000509828 MAGI3Q5TCQ9 1506 aa17.65■□□□□ 0.42
MBD4-208ENST00000509828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
MBD4-208ENST00000509828 HNRNPUL2Q1KMD3 747 aaKnown RBP17.64■□□□□ 0.41
MBD4-208ENST00000509828 CFAP43Q8NDM7 1665 aa17.61■□□□□ 0.41
MBD4-208ENST00000509828 CTTNBP2Q8WZ74 1663 aa17.58■□□□□ 0.41
MBD4-208ENST00000509828 ABCA8O94911 1581 aa17.58■□□□□ 0.41
MBD4-208ENST00000509828 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
MBD4-208ENST00000509828 RAPGEF3O95398 923 aa17.54■□□□□ 0.4
MBD4-208ENST00000509828 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
MBD4-208ENST00000509828 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
MBD4-208ENST00000509828 FBXO41Q8TF61 875 aa17.53■□□□□ 0.4
MBD4-208ENST00000509828 ARAP3Q8WWN8 1544 aa17.52■□□□□ 0.4
MBD4-208ENST00000509828 KIF21BO75037 1637 aa17.52■□□□□ 0.4
MBD4-208ENST00000509828 ATP10BO94823 1461 aa17.51■□□□□ 0.39
MBD4-208ENST00000509828 PRXQ9BXM0 1461 aa17.5■□□□□ 0.39
MBD4-208ENST00000509828 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
MBD4-208ENST00000509828 PTPRMP28827 1452 aa17.46■□□□□ 0.39
MBD4-208ENST00000509828 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
MBD4-208ENST00000509828 PLEKHD1A6NEE1 506 aa17.45■□□□□ 0.38
MBD4-208ENST00000509828 NEO1Q92859 1461 aa17.43■□□□□ 0.38
MBD4-208ENST00000509828 ABCA9Q8IUA7 1624 aa17.41■□□□□ 0.38
MBD4-208ENST00000509828 RAPGEF6Q8TEU7 1601 aa17.37■□□□□ 0.37
MBD4-208ENST00000509828 ADAMTSL3P82987 1691 aa17.36■□□□□ 0.37
MBD4-208ENST00000509828 DENND4BO75064 1496 aaPredicted RBP17.36■□□□□ 0.37
MBD4-208ENST00000509828 MLECQ14165 292 aa17.34■□□□□ 0.37
MBD4-208ENST00000509828 POGZQ7Z3K3 1410 aa17.34■□□□□ 0.37
MBD4-208ENST00000509828 HSPA2P54652 639 aa17.33■□□□□ 0.36
MBD4-208ENST00000509828 FHOD3Q2V2M9 1422 aa17.32■□□□□ 0.36
MBD4-208ENST00000509828 AKNAQ7Z591 1439 aa17.32■□□□□ 0.36
MBD4-208ENST00000509828 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
MBD4-208ENST00000509828 MADDQ8WXG6 1647 aa17.32■□□□□ 0.36
MBD4-208ENST00000509828 PCF11O94913 1555 aaKnown RBP17.32■□□□□ 0.36
MBD4-208ENST00000509828 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
MBD4-208ENST00000509828 BCORL1Q5H9F3 1711 aa17.31■□□□□ 0.36
MBD4-208ENST00000509828 SAMD9Q5K651 1589 aa17.31■□□□□ 0.36
MBD4-208ENST00000509828 FANCAO15360 1455 aa17.3■□□□□ 0.36
MBD4-208ENST00000509828 LMTK3Q96Q04 1460 aa17.28■□□□□ 0.36
MBD4-208ENST00000509828 FRMPD1Q5SYB0 1578 aa17.27■□□□□ 0.35
MBD4-208ENST00000509828 RIMS1Q86UR5 1692 aaKnown RBP17.26■□□□□ 0.35
MBD4-208ENST00000509828 MYT1LQ9UL68 1186 aa17.26■□□□□ 0.35
MBD4-208ENST00000509828 ARHGEF40Q8TER5 1519 aa17.25■□□□□ 0.35
MBD4-208ENST00000509828 EEA1Q15075 1411 aa17.24■□□□□ 0.35
MBD4-208ENST00000509828 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
MBD4-208ENST00000509828 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
MBD4-208ENST00000509828 CFAP74Q9C0B2 1584 aa17.23■□□□□ 0.35
MBD4-208ENST00000509828 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
MBD4-208ENST00000509828 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.35
MBD4-208ENST00000509828 CDK11AQ9UQ88 783 aaPredicted RBP17.21■□□□□ 0.35
MBD4-208ENST00000509828 EFCAB5A4FU69 1503 aa17.21■□□□□ 0.34
MBD4-208ENST00000509828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.21■□□□□ 0.342e-7■■■□□ 19.1
MBD4-208ENST00000509828 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.34
MBD4-208ENST00000509828 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.34
MBD4-208ENST00000509828 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms