RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 NPM1P06748 294 aaKnown RBP eCLIP7.6□□□□□ -1.19
HMGN1P11-201ENST00000508668 CIZ1Q9ULV3 898 aaPredicted RBP7.6□□□□□ -1.19
HMGN1P11-201ENST00000508668 NUBP1P53384 320 aa7.59□□□□□ -1.19
HMGN1P11-201ENST00000508668 PKD2Q13563 968 aa7.56□□□□□ -1.2
HMGN1P11-201ENST00000508668 DCAF8Q5TAQ9 597 aa7.56□□□□□ -1.2
HMGN1P11-201ENST00000508668 RASEFQ8IZ41 740 aa7.56□□□□□ -1.2
HMGN1P11-201ENST00000508668 FAM212AQ96EL1 285 aa7.55□□□□□ -1.2
HMGN1P11-201ENST00000508668 GABBR2O75899 941 aa7.54□□□□□ -1.2
HMGN1P11-201ENST00000508668 C19orf67A6NJJ6 358 aa7.53□□□□□ -1.2
HMGN1P11-201ENST00000508668 ECM2O94769 699 aaPredicted RBP7.53□□□□□ -1.2
HMGN1P11-201ENST00000508668 GSE1Q14687 1217 aa7.53□□□□□ -1.2
HMGN1P11-201ENST00000508668 TSPYL2Q9H2G4 693 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P11-201ENST00000508668 PAK3O75914 559 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P11-201ENST00000508668 PYGBP11216 843 aa7.46□□□□□ -1.22
HMGN1P11-201ENST00000508668 TRIM41Q8WV44 630 aa7.46□□□□□ -1.22
HMGN1P11-201ENST00000508668 CD44P16070 742 aaKnown RBP7.45□□□□□ -1.22
HMGN1P11-201ENST00000508668 RGL2O15211 777 aa7.44□□□□□ -1.22
HMGN1P11-201ENST00000508668 MYO15BQ96JP2 1530 aa7.43□□□□□ -1.22
HMGN1P11-201ENST00000508668 ZRANB1Q9UGI0 708 aa7.43□□□□□ -1.22
HMGN1P11-201ENST00000508668 CCDC61Q9Y6R9 512 aa7.42□□□□□ -1.22
HMGN1P11-201ENST00000508668 DCBLD2Q96PD2 775 aa7.41□□□□□ -1.22
HMGN1P11-201ENST00000508668 CLCN6P51797 869 aa7.39□□□□□ -1.23
HMGN1P11-201ENST00000508668 RNF25Q96BH1 459 aaPredicted RBP7.39□□□□□ -1.23
HMGN1P11-201ENST00000508668 CHRM1P11229 460 aaPredicted RBP7.38□□□□□ -1.23
HMGN1P11-201ENST00000508668 PHF12Q96QT6 1004 aa7.37□□□□□ -1.23
HMGN1P11-201ENST00000508668 RIOK3O14730 519 aaKnown RBP7.36□□□□□ -1.23
HMGN1P11-201ENST00000508668 UNC13AQ9UPW8 1703 aa7.35□□□□□ -1.23
HMGN1P11-201ENST00000508668 ZCCHC6Q5VYS8 1495 aaKnown RBP7.35□□□□□ -1.23
HMGN1P11-201ENST00000508668 MAP3K13O43283 966 aa7.34□□□□□ -1.23
HMGN1P11-201ENST00000508668 PCDHB13Q9Y5F0 798 aa7.34□□□□□ -1.23
HMGN1P11-201ENST00000508668 DCAF1Q9Y4B6 1507 aa7.33□□□□□ -1.24
HMGN1P11-201ENST00000508668 SHROOM4Q9ULL8 1493 aa7.33□□□□□ -1.24
HMGN1P11-201ENST00000508668 ZNF579Q8NAF0 562 aaKnown RBP7.33□□□□□ -1.24
HMGN1P11-201ENST00000508668 KIF12Q96FN5 646 aa7.33□□□□□ -1.24
HMGN1P11-201ENST00000508668 PCDHB8Q9UN66 801 aa7.33□□□□□ -1.24
HMGN1P11-201ENST00000508668 SCRIBQ14160 1630 aa7.32□□□□□ -1.24
HMGN1P11-201ENST00000508668 CHGAP10645 457 aaKnown RBP7.32□□□□□ -1.24
HMGN1P11-201ENST00000508668 ZNF467Q7Z7K2 595 aaPredicted RBP7.32□□□□□ -1.24
HMGN1P11-201ENST00000508668 VGFO15240 615 aaPredicted RBP7.31□□□□□ -1.24
HMGN1P11-201ENST00000508668 TAOK2Q9UL54 1235 aa7.31□□□□□ -1.24
HMGN1P11-201ENST00000508668 IFNL1Q8IU54 200 aa7.3□□□□□ -1.24
HMGN1P11-201ENST00000508668 BICRAQ9NZM4 1560 aa7.29□□□□□ -1.24
HMGN1P11-201ENST00000508668 SGIP1Q9BQI5 828 aa7.29□□□□□ -1.24
HMGN1P11-201ENST00000508668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.28□□□□□ -1.24
HMGN1P11-201ENST00000508668 STK25O00506 426 aa7.28□□□□□ -1.24
HMGN1P11-201ENST00000508668 ZFP91Q96JP5 570 aaPredicted RBP7.28□□□□□ -1.24
HMGN1P11-201ENST00000508668 CECR2Q9BXF3 1484 aa7.28□□□□□ -1.24
HMGN1P11-201ENST00000508668 POTEIP0CG38 1075 aa7.27□□□□□ -1.25
HMGN1P11-201ENST00000508668 PDAP1Q13442 181 aaKnown RBP7.27□□□□□ -1.25
HMGN1P11-201ENST00000508668 MS4A3Q96HJ5 214 aa7.27□□□□□ -1.25
HMGN1P11-201ENST00000508668 HS6ST3Q8IZP7 471 aa7.26□□□□□ -1.25
HMGN1P11-201ENST00000508668 BCL11BQ9C0K0 894 aaPredicted RBP7.26□□□□□ -1.25
HMGN1P11-201ENST00000508668 STK24Q9Y6E0 443 aa7.26□□□□□ -1.25
HMGN1P11-201ENST00000508668 PSEN1P49768 467 aa7.25□□□□□ -1.25
HMGN1P11-201ENST00000508668 GALR2O43603 387 aaPredicted RBP7.24□□□□□ -1.25
HMGN1P11-201ENST00000508668 CC2D2AQ9P2K1 1620 aa7.23□□□□□ -1.25
HMGN1P11-201ENST00000508668 BBXQ8WY36 941 aaPredicted RBP7.23□□□□□ -1.25
HMGN1P11-201ENST00000508668 TRPC6Q9Y210 931 aa7.23□□□□□ -1.25
HMGN1P11-201ENST00000508668 EIF4G1Q04637 1599 aaKnown RBP7.22□□□□□ -1.25
HMGN1P11-201ENST00000508668 POTEMA6NI47 508 aa7.22□□□□□ -1.25
HMGN1P11-201ENST00000508668 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.22□□□□□ -1.25
HMGN1P11-201ENST00000508668 TMEM106CQ9BVX2 250 aa7.2□□□□□ -1.26
HMGN1P11-201ENST00000508668 POTEGQ6S5H5 508 aa7.19□□□□□ -1.26
HMGN1P11-201ENST00000508668 CFAP44Q96MT7 982 aa7.19□□□□□ -1.26
HMGN1P11-201ENST00000508668 CABP2Q9NPB3 220 aa7.19□□□□□ -1.26
HMGN1P11-201ENST00000508668 PAXIP1Q6ZW49 1069 aaPredicted RBP7.18□□□□□ -1.26
HMGN1P11-201ENST00000508668 TIE1P35590 1138 aa7.17□□□□□ -1.26
HMGN1P11-201ENST00000508668 PLCB2Q00722 1185 aa7.17□□□□□ -1.26
HMGN1P11-201ENST00000508668 NKX1-1Q15270 411 aaPredicted RBP7.17□□□□□ -1.26
HMGN1P11-201ENST00000508668 PCDH10Q9P2E7 1040 aa7.17□□□□□ -1.26
HMGN1P11-201ENST00000508668 GOLGA2Q08379 1002 aa7.16□□□□□ -1.26
HMGN1P11-201ENST00000508668 BMP2KQ9NSY1 1161 aaPredicted RBP7.16□□□□□ -1.26
HMGN1P11-201ENST00000508668 TTLL13PA6NNM8 815 aa7.15□□□□□ -1.26
HMGN1P11-201ENST00000508668 EFCAB3Q8N7B9 438 aa7.15□□□□□ -1.26
HMGN1P11-201ENST00000508668 SPRYD3Q8NCJ5 442 aa7.15□□□□□ -1.26
HMGN1P11-201ENST00000508668 DNAJC5Q9H3Z4 198 aa7.15□□□□□ -1.26
HMGN1P11-201ENST00000508668 OTUD5Q96G74 571 aa7.14□□□□□ -1.27
HMGN1P11-201ENST00000508668 SLC24A1O60721 1099 aa7.12□□□□□ -1.27
HMGN1P11-201ENST00000508668 HAP1P54257 671 aaPredicted RBP7.12□□□□□ -1.27
HMGN1P11-201ENST00000508668 TRIM35Q9UPQ4 493 aa7.12□□□□□ -1.27
HMGN1P11-201ENST00000508668 ATN1P54259 1190 aaPredicted RBP7.11□□□□□ -1.27
HMGN1P11-201ENST00000508668 MKRN3Q13064 507 aaKnown RBP7.11□□□□□ -1.27
HMGN1P11-201ENST00000508668 ATMINO43313 823 aaPredicted RBP7.1□□□□□ -1.27
HMGN1P11-201ENST00000508668 GTPBP6O43824 516 aaPredicted RBP7.09□□□□□ -1.27
HMGN1P11-201ENST00000508668 ASTLQ6HA08 431 aaPredicted RBP7.09□□□□□ -1.27
HMGN1P11-201ENST00000508668 MAMSTRQ6ZN01 415 aa7.09□□□□□ -1.27
HMGN1P11-201ENST00000508668 MFRPQ9BY79 579 aa7.09□□□□□ -1.27
HMGN1P11-201ENST00000508668 PHF8Q9UPP1 1060 aa7.09□□□□□ -1.27
HMGN1P11-201ENST00000508668 SOX12O15370 315 aa7.08□□□□□ -1.28
HMGN1P11-201ENST00000508668 RYDENQ9NUL5 291 aaKnown RBP7.08□□□□□ -1.28
HMGN1P11-201ENST00000508668 ERCC6Q03468 1493 aa7.07□□□□□ -1.28
HMGN1P11-201ENST00000508668 NLRP6P59044 892 aa7.07□□□□□ -1.28
HMGN1P11-201ENST00000508668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMGN1P11-201ENST00000508668 PELP1Q8IZL8 1130 aaKnown RBP7.04□□□□□ -1.28
HMGN1P11-201ENST00000508668 FBXO22Q8NEZ5 403 aa7.04□□□□□ -1.28
HMGN1P11-201ENST00000508668 SCUBE2Q9NQ36 999 aa7.04□□□□□ -1.28
HMGN1P11-201ENST00000508668 POTEB2H3BUK9 544 aa7.03□□□□□ -1.28
HMGN1P11-201ENST00000508668 FAM163AQ96GL9 167 aaPredicted RBP7.03□□□□□ -1.28
HMGN1P11-201ENST00000508668 TSHZ2Q9NRE2 1034 aa7.03□□□□□ -1.28
HMGN1P11-201ENST00000508668 SLC39A7Q92504 469 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms