RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CCDC61Q9Y6R9 512 aa11.09□□□□□ -0.63
HMGB1P44-201ENST00000508597 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
HMGB1P44-201ENST00000508597 CIZ1Q9ULV3 898 aaPredicted RBP11.07□□□□□ -0.64
HMGB1P44-201ENST00000508597 PKD2Q13563 968 aa11.05□□□□□ -0.64
HMGB1P44-201ENST00000508597 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
HMGB1P44-201ENST00000508597 PYGBP11216 843 aa11.02□□□□□ -0.65
HMGB1P44-201ENST00000508597 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
HMGB1P44-201ENST00000508597 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
HMGB1P44-201ENST00000508597 RTN4Q9NQC3 1192 aaKnown RBP11□□□□□ -0.65
HMGB1P44-201ENST00000508597 GSE1Q14687 1217 aa10.99□□□□□ -0.65
HMGB1P44-201ENST00000508597 KIF12Q96FN5 646 aa10.98□□□□□ -0.65
HMGB1P44-201ENST00000508597 MAP3K13O43283 966 aa10.97□□□□□ -0.65
HMGB1P44-201ENST00000508597 AMER1Q5JTC6 1135 aaPredicted RBP10.97□□□□□ -0.65
HMGB1P44-201ENST00000508597 GABBR2O75899 941 aa10.95□□□□□ -0.66
HMGB1P44-201ENST00000508597 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
HMGB1P44-201ENST00000508597 ABCC9O60706 1549 aa10.94□□□□□ -0.66
HMGB1P44-201ENST00000508597 RNF25Q96BH1 459 aaPredicted RBP10.92□□□□□ -0.66
HMGB1P44-201ENST00000508597 MS4A3Q96HJ5 214 aa10.92□□□□□ -0.66
HMGB1P44-201ENST00000508597 TRPC6Q9Y210 931 aa10.92□□□□□ -0.66
HMGB1P44-201ENST00000508597 CHRM1P11229 460 aaPredicted RBP10.91□□□□□ -0.66
HMGB1P44-201ENST00000508597 ECM2O94769 699 aaPredicted RBP10.9□□□□□ -0.66
HMGB1P44-201ENST00000508597 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
HMGB1P44-201ENST00000508597 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.66
HMGB1P44-201ENST00000508597 IFNL1Q8IU54 200 aa10.89□□□□□ -0.67
HMGB1P44-201ENST00000508597 RGL2O15211 777 aa10.88□□□□□ -0.67
HMGB1P44-201ENST00000508597 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
HMGB1P44-201ENST00000508597 TRIM41Q8WV44 630 aa10.81□□□□□ -0.68
HMGB1P44-201ENST00000508597 SGIP1Q9BQI5 828 aa10.8□□□□□ -0.68
HMGB1P44-201ENST00000508597 ZCCHC6Q5VYS8 1495 aaKnown RBP10.76□□□□□ -0.69
HMGB1P44-201ENST00000508597 RIOK3O14730 519 aaKnown RBP10.75□□□□□ -0.69
HMGB1P44-201ENST00000508597 BMP2KQ9NSY1 1161 aaPredicted RBP10.75□□□□□ -0.69
HMGB1P44-201ENST00000508597 CLCN6P51797 869 aa10.74□□□□□ -0.69
HMGB1P44-201ENST00000508597 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
HMGB1P44-201ENST00000508597 MYO15BQ96JP2 1530 aa10.74□□□□□ -0.69
HMGB1P44-201ENST00000508597 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
HMGB1P44-201ENST00000508597 DCAF1Q9Y4B6 1507 aa10.73□□□□□ -0.69
HMGB1P44-201ENST00000508597 PSEN1P49768 467 aa10.72□□□□□ -0.69
HMGB1P44-201ENST00000508597 NACADO15069 1562 aa10.71□□□□□ -0.69
HMGB1P44-201ENST00000508597 ATMINO43313 823 aaPredicted RBP10.71□□□□□ -0.69
HMGB1P44-201ENST00000508597 ATN1P54259 1190 aaPredicted RBP10.71□□□□□ -0.69
HMGB1P44-201ENST00000508597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.7□□□□□ -0.7
HMGB1P44-201ENST00000508597 TTLL13PA6NNM8 815 aa10.7□□□□□ -0.7
HMGB1P44-201ENST00000508597 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
HMGB1P44-201ENST00000508597 TMEM106CQ9BVX2 250 aa10.69□□□□□ -0.7
HMGB1P44-201ENST00000508597 TIE1P35590 1138 aa10.68□□□□□ -0.7
HMGB1P44-201ENST00000508597 DCBLD2Q96PD2 775 aa10.68□□□□□ -0.7
HMGB1P44-201ENST00000508597 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
HMGB1P44-201ENST00000508597 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
HMGB1P44-201ENST00000508597 RB1CC1Q8TDY2 1594 aa10.67□□□□□ -0.7
HMGB1P44-201ENST00000508597 VGFO15240 615 aaPredicted RBP10.66□□□□□ -0.7
HMGB1P44-201ENST00000508597 DCAF8L2P0C7V8 631 aa10.65□□□□□ -0.7
HMGB1P44-201ENST00000508597 TRIM35Q9UPQ4 493 aa10.62□□□□□ -0.71
HMGB1P44-201ENST00000508597 CHGAP10645 457 aaKnown RBP10.61□□□□□ -0.71
HMGB1P44-201ENST00000508597 BCL11BQ9C0K0 894 aaPredicted RBP10.61□□□□□ -0.71
HMGB1P44-201ENST00000508597 STK25O00506 426 aa10.6□□□□□ -0.71
HMGB1P44-201ENST00000508597 CABP2Q9NPB3 220 aa10.59□□□□□ -0.71
HMGB1P44-201ENST00000508597 STK24Q9Y6E0 443 aa10.59□□□□□ -0.71
HMGB1P44-201ENST00000508597 POTEFA5A3E0 1075 aa10.57□□□□□ -0.72
HMGB1P44-201ENST00000508597 EFCAB3Q8N7B9 438 aa10.57□□□□□ -0.72
HMGB1P44-201ENST00000508597 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
HMGB1P44-201ENST00000508597 COLQQ9Y215 455 aaPredicted RBP10.54□□□□□ -0.72
HMGB1P44-201ENST00000508597 NKX1-1Q15270 411 aaPredicted RBP10.53□□□□□ -0.72
HMGB1P44-201ENST00000508597 LHX8Q68G74 356 aa10.51□□□□□ -0.73
HMGB1P44-201ENST00000508597 TAOK2Q9UL54 1235 aa10.51□□□□□ -0.73
HMGB1P44-201ENST00000508597 METRNQ9UJH8 293 aa10.5□□□□□ -0.73
HMGB1P44-201ENST00000508597 POTEB2H3BUK9 544 aa10.49□□□□□ -0.73
HMGB1P44-201ENST00000508597 IRX5P78411 483 aaPredicted RBP10.49□□□□□ -0.73
HMGB1P44-201ENST00000508597 SLC39A7Q92504 469 aa10.48□□□□□ -0.73
HMGB1P44-201ENST00000508597 PHF8Q9UPP1 1060 aa10.48□□□□□ -0.73
HMGB1P44-201ENST00000508597 DPY19L2Q6NUT2 758 aa10.47□□□□□ -0.73
HMGB1P44-201ENST00000508597 MFRPQ9BY79 579 aa10.47□□□□□ -0.73
HMGB1P44-201ENST00000508597 C7P10643 843 aa10.46□□□□□ -0.73
HMGB1P44-201ENST00000508597 GOLGA2Q08379 1002 aa10.46□□□□□ -0.73
HMGB1P44-201ENST00000508597 MKRN3Q13064 507 aaKnown RBP10.46□□□□□ -0.73
HMGB1P44-201ENST00000508597 MS4A4AQ96JQ5 239 aa10.46□□□□□ -0.73
HMGB1P44-201ENST00000508597 POTEJP0CG39 1038 aa10.45□□□□□ -0.74
HMGB1P44-201ENST00000508597 ILDR1Q86SU0 546 aaPredicted RBP10.45□□□□□ -0.74
HMGB1P44-201ENST00000508597 IER5LQ5T953 404 aa10.44□□□□□ -0.74
HMGB1P44-201ENST00000508597 PDCD7Q8N8D1 485 aaKnown RBP10.44□□□□□ -0.74
HMGB1P44-201ENST00000508597 FBXO22Q8NEZ5 403 aa10.44□□□□□ -0.74
HMGB1P44-201ENST00000508597 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
HMGB1P44-201ENST00000508597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.44□□□□□ -0.74
HMGB1P44-201ENST00000508597 SLC24A1O60721 1099 aa10.41□□□□□ -0.74
HMGB1P44-201ENST00000508597 OCEL1Q9H607 264 aa10.41□□□□□ -0.74
HMGB1P44-201ENST00000508597 SOX12O15370 315 aa10.4□□□□□ -0.74
HMGB1P44-201ENST00000508597 PPP1R37O75864 691 aa10.4□□□□□ -0.74
HMGB1P44-201ENST00000508597 SEC24BO95487 1268 aa10.39□□□□□ -0.75
HMGB1P44-201ENST00000508597 GTPBP6O43824 516 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P44-201ENST00000508597 BBXQ8WY36 941 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P44-201ENST00000508597 UNC13AQ9UPW8 1703 aa10.38□□□□□ -0.75
HMGB1P44-201ENST00000508597 PLCG2P16885 1265 aa10.37□□□□□ -0.75
HMGB1P44-201ENST00000508597 NLRP6P59044 892 aa10.35□□□□□ -0.75
HMGB1P44-201ENST00000508597 SCRIBQ14160 1630 aa10.34□□□□□ -0.75
HMGB1P44-201ENST00000508597 SHROOM4Q9ULL8 1493 aa10.3□□□□□ -0.76
HMGB1P44-201ENST00000508597 PAXIP1Q6ZW49 1069 aaPredicted RBP10.29□□□□□ -0.76
HMGB1P44-201ENST00000508597 BICRAQ9NZM4 1560 aa10.28□□□□□ -0.76
HMGB1P44-201ENST00000508597 CFAP44Q96MT7 982 aa10.27□□□□□ -0.77
HMGB1P44-201ENST00000508597 OTUD5Q96G74 571 aa10.26□□□□□ -0.77
HMGB1P44-201ENST00000508597 BOLA1Q9Y3E2 137 aa10.25□□□□□ -0.77
HMGB1P44-201ENST00000508597 MICALL2Q8IY33 904 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms