RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 IRX6P78412 446 aaPredicted RBP10.84□□□□□ -0.67
PDE6A-202ENST00000508173 P3H3Q8IVL6 736 aa10.84□□□□□ -0.67
PDE6A-202ENST00000508173 PLEKHD1A6NEE1 506 aa10.81□□□□□ -0.68
PDE6A-202ENST00000508173 ARXQ96QS3 562 aa10.8□□□□□ -0.68
PDE6A-202ENST00000508173 CSRNP3Q8WYN3 585 aa10.78□□□□□ -0.68
PDE6A-202ENST00000508173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.77□□□□□ -0.68
PDE6A-202ENST00000508173 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.69
PDE6A-202ENST00000508173 HDGFP51858 240 aaKnown RBP10.77□□□□□ -0.69
PDE6A-202ENST00000508173 HSP90AA1P07900 732 aaKnown RBP10.75□□□□□ -0.69
PDE6A-202ENST00000508173 DDX10Q13206 875 aaKnown RBP10.75□□□□□ -0.69
PDE6A-202ENST00000508173 TSPY4P0CV99 314 aa10.75□□□□□ -0.69
PDE6A-202ENST00000508173 TSPY10P0CW01 314 aa10.75□□□□□ -0.69
PDE6A-202ENST00000508173 RSF1Q96T23 1441 aaPredicted RBP10.74□□□□□ -0.69
PDE6A-202ENST00000508173 HNRNPUQ00839 825 aaKnown RBP eCLIP10.73□□□□□ -0.69
PDE6A-202ENST00000508173 PHF23Q9BUL5 403 aaPredicted RBP10.73□□□□□ -0.69
PDE6A-202ENST00000508173 ANP32BQ92688 251 aaKnown RBP10.72□□□□□ -0.69
PDE6A-202ENST00000508173 CEP164Q9UPV0 1460 aa10.72□□□□□ -0.69
PDE6A-202ENST00000508173 LMOD2Q6P5Q4 547 aa10.71□□□□□ -0.69
PDE6A-202ENST00000508173 SENP3Q9H4L4 574 aaPredicted RBP10.7□□□□□ -0.7
PDE6A-202ENST00000508173 FAM9BQ8IZU0 186 aa10.69□□□□□ -0.7
PDE6A-202ENST00000508173 WRNQ14191 1432 aaPredicted RBP eCLIP10.69□□□□□ -0.7
PDE6A-202ENST00000508173 CADPSQ9ULU8 1353 aa10.69□□□□□ -0.7
PDE6A-202ENST00000508173 MLECQ14165 292 aa10.69□□□□□ -0.7
PDE6A-202ENST00000508173 HIRIP3Q9BW71 556 aaPredicted RBP10.68□□□□□ -0.7
PDE6A-202ENST00000508173 KIF27Q86VH2 1401 aa10.68□□□□□ -0.7
PDE6A-202ENST00000508173 MYH16Q9H6N6 1097 aa10.68□□□□□ -0.7
PDE6A-202ENST00000508173 SUPT16HQ9Y5B9 1047 aaKnown RBP10.68□□□□□ -0.7
PDE6A-202ENST00000508173 CARMIL2Q6F5E8 1435 aa10.68□□□□□ -0.7
PDE6A-202ENST00000508173 UPF2Q9HAU5 1272 aaKnown RBP10.67□□□□□ -0.7
PDE6A-202ENST00000508173 TULP1O00294 542 aaPredicted RBP10.67□□□□□ -0.7
PDE6A-202ENST00000508173 EIF4G1Q04637 1599 aaKnown RBP10.66□□□□□ -0.7
PDE6A-202ENST00000508173 ATAD2BQ9ULI0 1458 aa10.65□□□□□ -0.7
PDE6A-202ENST00000508173 GLIPR1L2Q4G1C9 344 aa10.65□□□□□ -0.7
PDE6A-202ENST00000508173 EIF4G2P78344 907 aaKnown RBP eCLIP10.65□□□□□ -0.71
PDE6A-202ENST00000508173 TMX4Q9H1E5 349 aaPredicted RBP10.64□□□□□ -0.71
PDE6A-202ENST00000508173 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
PDE6A-202ENST00000508173 ABCC8Q09428 1581 aa10.64□□□□□ -0.71
PDE6A-202ENST00000508173 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
PDE6A-202ENST00000508173 SMARCA4P51532 1647 aa10.62□□□□□ -0.71
PDE6A-202ENST00000508173 SENP3-EIF4A1A0A087X0R7 540 aa10.61□□□□□ -0.71
PDE6A-202ENST00000508173 WDR43Q15061 677 aaKnown RBP eCLIP10.61□□□□□ -0.71
PDE6A-202ENST00000508173 SOGA1O94964 1423 aa10.61□□□□□ -0.71
PDE6A-202ENST00000508173 CC2D2AQ9P2K1 1620 aa10.6□□□□□ -0.71
PDE6A-202ENST00000508173 MEX3CQ5U5Q3 659 aaKnown RBP10.6□□□□□ -0.71
PDE6A-202ENST00000508173 CCDC136Q96JN2 1154 aa10.6□□□□□ -0.71
PDE6A-202ENST00000508173 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.59□□□□□ -0.71
PDE6A-202ENST00000508173 MROH2BQ7Z745 1585 aa10.58□□□□□ -0.72
PDE6A-202ENST00000508173 FAM69CQ0P6D2 419 aa10.58□□□□□ -0.72
PDE6A-202ENST00000508173 TOP2AP11388 1531 aaKnown RBP10.58□□□□□ -0.72
PDE6A-202ENST00000508173 EEA1Q15075 1411 aa10.57□□□□□ -0.72
PDE6A-202ENST00000508173 FANCD2Q9BXW9 1451 aa10.56□□□□□ -0.72
PDE6A-202ENST00000508173 CUX2O14529 1486 aa10.56□□□□□ -0.72
PDE6A-202ENST00000508173 DEKP35659 375 aaKnown RBP10.56□□□□□ -0.72
PDE6A-202ENST00000508173 MTUS2Q5JR59 1369 aa10.56□□□□□ -0.72
PDE6A-202ENST00000508173 NCBP3Q53F19 620 aaKnown RBP10.56□□□□□ -0.72
PDE6A-202ENST00000508173 LAS1LQ9Y4W2 734 aaKnown RBP10.55□□□□□ -0.72
PDE6A-202ENST00000508173 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.55□□□□□ -0.72
PDE6A-202ENST00000508173 CCDC9Q9Y3X0 531 aaKnown RBP10.55□□□□□ -0.72
PDE6A-202ENST00000508173 KRI1Q8N9T8 703 aaKnown RBP10.55□□□□□ -0.72
PDE6A-202ENST00000508173 TONSLQ96HA7 1378 aa10.54□□□□□ -0.72
PDE6A-202ENST00000508173 NCAPD3P42695 1498 aa10.54□□□□□ -0.72
PDE6A-202ENST00000508173 EID1Q9Y6B2 187 aa10.53□□□□□ -0.72
PDE6A-202ENST00000508173 TMC1Q8TDI8 760 aa10.53□□□□□ -0.72
PDE6A-202ENST00000508173 CLSTN1O94985 981 aa10.53□□□□□ -0.72
PDE6A-202ENST00000508173 CCDC88BA6NC98 1476 aa10.52□□□□□ -0.73
PDE6A-202ENST00000508173 RBM19Q9Y4C8 960 aaKnown RBP10.51□□□□□ -0.73
PDE6A-202ENST00000508173 CLIP1P30622 1438 aa10.51□□□□□ -0.73
PDE6A-202ENST00000508173 KDM2AQ9Y2K7 1162 aa10.51□□□□□ -0.73
PDE6A-202ENST00000508173 POGKQ9P215 609 aa10.51□□□□□ -0.73
PDE6A-202ENST00000508173 CFAP53Q96M91 514 aa10.51□□□□□ -0.73
PDE6A-202ENST00000508173 ZRSR1Q15695 479 aaKnown RBP10.51□□□□□ -0.73
PDE6A-202ENST00000508173 TSHZ2Q9NRE2 1034 aa10.5□□□□□ -0.73
PDE6A-202ENST00000508173 ISY1Q9ULR0 285 aaKnown RBP10.5□□□□□ -0.73
PDE6A-202ENST00000508173 CHIC2Q9UKJ5 165 aa10.49□□□□□ -0.73
PDE6A-202ENST00000508173 NOP58Q9Y2X3 529 aaKnown RBP10.49□□□□□ -0.73
PDE6A-202ENST00000508173 TDRD9Q8NDG6 1382 aaKnown RBP10.49□□□□□ -0.73
PDE6A-202ENST00000508173 SF3B2Q13435 895 aaKnown RBP10.48□□□□□ -0.73
PDE6A-202ENST00000508173 KANK1Q14678 1352 aa10.48□□□□□ -0.73
PDE6A-202ENST00000508173 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
PDE6A-202ENST00000508173 MRC2Q9UBG0 1479 aa10.47□□□□□ -0.73
PDE6A-202ENST00000508173 PPM1GO15355 546 aaPredicted RBP10.47□□□□□ -0.73
PDE6A-202ENST00000508173 MRS2Q9HD23 443 aa10.47□□□□□ -0.73
PDE6A-202ENST00000508173 NCLP19338 710 aaKnown RBP10.46□□□□□ -0.73
PDE6A-202ENST00000508173 EFCAB2Q5VUJ9 269 aa10.46□□□□□ -0.74
PDE6A-202ENST00000508173 CFDP1Q9UEE9 299 aaPredicted RBP10.46□□□□□ -0.74
PDE6A-202ENST00000508173 DMRT2Q9Y5R5 561 aa10.46□□□□□ -0.74
PDE6A-202ENST00000508173 WIZO95785 1651 aa10.46□□□□□ -0.74
PDE6A-202ENST00000508173 G3V3G9 751 aa10.45□□□□□ -0.74
PDE6A-202ENST00000508173 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
PDE6A-202ENST00000508173 CDCA8Q53HL2 280 aa10.44□□□□□ -0.74
PDE6A-202ENST00000508173 GOLGA3Q08378 1498 aa10.44□□□□□ -0.74
PDE6A-202ENST00000508173 NAP1L5Q96NT1 182 aaPredicted RBP10.44□□□□□ -0.74
PDE6A-202ENST00000508173 DNAJC5BQ9UF47 199 aa10.43□□□□□ -0.74
PDE6A-202ENST00000508173 B4GALNT3Q6L9W6 998 aa10.43□□□□□ -0.74
PDE6A-202ENST00000508173 CASC1Q6TDU7 716 aa10.43□□□□□ -0.74
PDE6A-202ENST00000508173 CSB-PGBD3P0DP91 1061 aa10.42□□□□□ -0.74
PDE6A-202ENST00000508173 HMGXB3Q12766 1538 aa10.41□□□□□ -0.74
PDE6A-202ENST00000508173 OS9Q13438 667 aaPredicted RBP10.41□□□□□ -0.74
PDE6A-202ENST00000508173 PRM3Q9NNZ6 103 aa10.4□□□□□ -0.74
PDE6A-202ENST00000508173 JPH4Q96JJ6 628 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms