RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 CLCN6P51797 869 aa15.89■□□□□ 0.13
CDH6-204ENST00000508132 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDH6-204ENST00000508132 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
CDH6-204ENST00000508132 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
CDH6-204ENST00000508132 TSPYL2Q9H2G4 693 aaPredicted RBP15.74■□□□□ 0.11
CDH6-204ENST00000508132 MS4A3Q96HJ5 214 aa15.73■□□□□ 0.11
CDH6-204ENST00000508132 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
CDH6-204ENST00000508132 EIF4G1Q04637 1599 aaKnown RBP15.69■□□□□ 0.1
CDH6-204ENST00000508132 POTEB2H3BUK9 544 aa15.66■□□□□ 0.1
CDH6-204ENST00000508132 MIER1Q8N108 512 aa15.66■□□□□ 0.1
CDH6-204ENST00000508132 CCDC61Q9Y6R9 512 aa15.65■□□□□ 0.1
CDH6-204ENST00000508132 FKBP8Q14318 412 aa15.62■□□□□ 0.09
CDH6-204ENST00000508132 RASEFQ8IZ41 740 aa15.62■□□□□ 0.09
CDH6-204ENST00000508132 ATMINO43313 823 aaPredicted RBP15.56■□□□□ 0.08
CDH6-204ENST00000508132 ASTLQ6HA08 431 aaPredicted RBP15.56■□□□□ 0.08
CDH6-204ENST00000508132 KIF12Q96FN5 646 aa15.56■□□□□ 0.08
CDH6-204ENST00000508132 TRPC6Q9Y210 931 aa15.56■□□□□ 0.08
CDH6-204ENST00000508132 SHROOM4Q9ULL8 1493 aa15.55■□□□□ 0.08
CDH6-204ENST00000508132 OTUD5Q96G74 571 aa15.55■□□□□ 0.08
CDH6-204ENST00000508132 PLCD3Q8N3E9 789 aa15.53■□□□□ 0.08
CDH6-204ENST00000508132 MYO15BQ96JP2 1530 aa15.52■□□□□ 0.07
CDH6-204ENST00000508132 PLEKHG5O94827 1062 aa15.5■□□□□ 0.07
CDH6-204ENST00000508132 MAP3K13O43283 966 aa15.49■□□□□ 0.07
CDH6-204ENST00000508132 METRNQ9UJH8 293 aa15.49■□□□□ 0.07
CDH6-204ENST00000508132 CUX2O14529 1486 aa15.48■□□□□ 0.07
CDH6-204ENST00000508132 ATN1P54259 1190 aaPredicted RBP15.47■□□□□ 0.07
CDH6-204ENST00000508132 POTEJP0CG39 1038 aa15.45■□□□□ 0.06
CDH6-204ENST00000508132 BMP2KQ9NSY1 1161 aaPredicted RBP15.44■□□□□ 0.06
CDH6-204ENST00000508132 NUBP1P53384 320 aa15.43■□□□□ 0.06
CDH6-204ENST00000508132 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
CDH6-204ENST00000508132 SLC39A7Q92504 469 aa15.39■□□□□ 0.05
CDH6-204ENST00000508132 C7P10643 843 aa15.37■□□□□ 0.05
CDH6-204ENST00000508132 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
CDH6-204ENST00000508132 POTEFA5A3E0 1075 aa15.35■□□□□ 0.05
CDH6-204ENST00000508132 TTLL13PA6NNM8 815 aa15.29■□□□□ 0.04
CDH6-204ENST00000508132 TIE1P35590 1138 aa15.29■□□□□ 0.04
CDH6-204ENST00000508132 ZBTB47Q9UFB7 747 aaPredicted RBP15.28■□□□□ 0.04
CDH6-204ENST00000508132 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
CDH6-204ENST00000508132 IFNL1Q8IU54 200 aa15.25■□□□□ 0.03
CDH6-204ENST00000508132 FAM212AQ96EL1 285 aa15.23■□□□□ 0.03
CDH6-204ENST00000508132 COLQQ9Y215 455 aaPredicted RBP15.23■□□□□ 0.03
CDH6-204ENST00000508132 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
CDH6-204ENST00000508132 TRIM35Q9UPQ4 493 aa15.18■□□□□ 0.02
CDH6-204ENST00000508132 SGIP1Q9BQI5 828 aa15.17■□□□□ 0.02
CDH6-204ENST00000508132 PYGBP11216 843 aa15.14■□□□□ 0.01
CDH6-204ENST00000508132 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
CDH6-204ENST00000508132 DCAF8Q5TAQ9 597 aa15.12■□□□□ 0.01
CDH6-204ENST00000508132 TMEM106CQ9BVX2 250 aa15.11■□□□□ 0.01
CDH6-204ENST00000508132 POTEMA6NI47 508 aa15.1■□□□□ 0.01
CDH6-204ENST00000508132 VASPP50552 380 aaPredicted RBP15.1■□□□□ 0.01
CDH6-204ENST00000508132 MAMSTRQ6ZN01 415 aa15.1■□□□□ 0.01
CDH6-204ENST00000508132 SEC24BO95487 1268 aa15.09■□□□□ 0.01
CDH6-204ENST00000508132 LCE2DQ5TA82 110 aaPredicted RBP15.09■□□□□ 0.01
CDH6-204ENST00000508132 SCUBE2Q9NQ36 999 aa15.08■□□□□ 0
CDH6-204ENST00000508132 POTEGQ6S5H5 508 aa15.07■□□□□ 0
CDH6-204ENST00000508132 PLSCR2Q9NRY7 297 aa15.07■□□□□ 0
CDH6-204ENST00000508132 PCDHB8Q9UN66 801 aa15.06■□□□□ 0
CDH6-204ENST00000508132 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
CDH6-204ENST00000508132 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
CDH6-204ENST00000508132 IER5LQ5T953 404 aa15.02■□□□□ -0
CDH6-204ENST00000508132 NESP48681 1621 aa15.02□□□□□ -0.01
CDH6-204ENST00000508132 THOC2Q8NI27 1593 aaKnown RBP15.02□□□□□ -0.01
CDH6-204ENST00000508132 KLHL34Q8N239 644 aa15.01□□□□□ -0.01
CDH6-204ENST00000508132 FAM163AQ96GL9 167 aaPredicted RBP14.98□□□□□ -0.01
CDH6-204ENST00000508132 IRX5P78411 483 aaPredicted RBP14.95□□□□□ -0.02
CDH6-204ENST00000508132 PLCG2P16885 1265 aa14.91□□□□□ -0.02
CDH6-204ENST00000508132 IFNLR1Q8IU57 520 aaPredicted RBP14.88□□□□□ -0.03
CDH6-204ENST00000508132 GSE1Q14687 1217 aa14.86□□□□□ -0.03
CDH6-204ENST00000508132 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
CDH6-204ENST00000508132 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
CDH6-204ENST00000508132 SLAIN1Q8ND83 568 aa14.83□□□□□ -0.04
CDH6-204ENST00000508132 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
CDH6-204ENST00000508132 OCEL1Q9H607 264 aa14.81□□□□□ -0.04
CDH6-204ENST00000508132 ZNF467Q7Z7K2 595 aaPredicted RBP14.78□□□□□ -0.04
CDH6-204ENST00000508132 CHRM1P11229 460 aaPredicted RBP14.76□□□□□ -0.05
CDH6-204ENST00000508132 PDCD7Q8N8D1 485 aaKnown RBP14.76□□□□□ -0.05
CDH6-204ENST00000508132 SPOCK2Q92563 424 aa14.75□□□□□ -0.05
CDH6-204ENST00000508132 BAZ1AQ9NRL2 1556 aaPredicted RBP14.75□□□□□ -0.05
CDH6-204ENST00000508132 PSEN1P49768 467 aa14.74□□□□□ -0.05
CDH6-204ENST00000508132 CIZ1Q9ULV3 898 aaPredicted RBP14.73□□□□□ -0.05
CDH6-204ENST00000508132 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
CDH6-204ENST00000508132 ST18O60284 1047 aa14.7□□□□□ -0.06
CDH6-204ENST00000508132 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
CDH6-204ENST00000508132 RIMBP3CA6NJZ7 1639 aa14.67□□□□□ -0.06
CDH6-204ENST00000508132 RIMBP3BA6NNM3 1639 aa14.67□□□□□ -0.06
CDH6-204ENST00000508132 RIMBP3Q9UFD9 1639 aa14.67□□□□□ -0.06
CDH6-204ENST00000508132 MKRN3Q13064 507 aaKnown RBP14.66□□□□□ -0.06
CDH6-204ENST00000508132 PCDH10Q9P2E7 1040 aa14.66□□□□□ -0.06
CDH6-204ENST00000508132 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
CDH6-204ENST00000508132 GOLGA2Q08379 1002 aa14.64□□□□□ -0.07
CDH6-204ENST00000508132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.63□□□□□ -0.07
CDH6-204ENST00000508132 PDAP1Q13442 181 aaKnown RBP14.62□□□□□ -0.07
CDH6-204ENST00000508132 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.62□□□□□ -0.07
CDH6-204ENST00000508132 DPY19L2Q6NUT2 758 aa14.61□□□□□ -0.07
CDH6-204ENST00000508132 CABP2Q9NPB3 220 aa14.59□□□□□ -0.07
CDH6-204ENST00000508132 CDAN1Q8IWY9 1227 aa14.58□□□□□ -0.08
CDH6-204ENST00000508132 ILDR1Q86SU0 546 aaPredicted RBP14.56□□□□□ -0.08
CDH6-204ENST00000508132 WDR62O43379 1518 aa14.56□□□□□ -0.08
CDH6-204ENST00000508132 SMARCA4P51532 1647 aa14.53□□□□□ -0.08
CDH6-204ENST00000508132 C3orf67Q6ZVT6 689 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms