RNA–Protein interactions for RNA: ENST00000506962.3

CCDC110-205, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 2

Gene CCDC110, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-205ENST00000506962 CC2D2AQ9P2K1 1620 aa11.85□□□□□ -0.51
CCDC110-205ENST00000506962 SHROOM4Q9ULL8 1493 aa11.84□□□□□ -0.51
CCDC110-205ENST00000506962 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
CCDC110-205ENST00000506962 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
CCDC110-205ENST00000506962 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
CCDC110-205ENST00000506962 PHF12Q96QT6 1004 aa11.83□□□□□ -0.52
CCDC110-205ENST00000506962 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
CCDC110-205ENST00000506962 TRIM41Q8WV44 630 aa11.82□□□□□ -0.52
CCDC110-205ENST00000506962 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
CCDC110-205ENST00000506962 SCRIBQ14160 1630 aa11.8□□□□□ -0.52
CCDC110-205ENST00000506962 GALR2O43603 387 aaPredicted RBP11.78□□□□□ -0.52
CCDC110-205ENST00000506962 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
CCDC110-205ENST00000506962 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
CCDC110-205ENST00000506962 CLCN6P51797 869 aa11.72□□□□□ -0.53
CCDC110-205ENST00000506962 CUX2O14529 1486 aa11.7□□□□□ -0.54
CCDC110-205ENST00000506962 RASEFQ8IZ41 740 aa11.7□□□□□ -0.54
CCDC110-205ENST00000506962 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
CCDC110-205ENST00000506962 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
CCDC110-205ENST00000506962 CCDC61Q9Y6R9 512 aa11.65□□□□□ -0.54
CCDC110-205ENST00000506962 LHX8Q68G74 356 aa11.62□□□□□ -0.55
CCDC110-205ENST00000506962 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
CCDC110-205ENST00000506962 EIF4G1Q04637 1599 aaKnown RBP11.6□□□□□ -0.55
CCDC110-205ENST00000506962 NUBP1P53384 320 aa11.6□□□□□ -0.55
CCDC110-205ENST00000506962 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
CCDC110-205ENST00000506962 MAP3K13O43283 966 aa11.56□□□□□ -0.56
CCDC110-205ENST00000506962 VASPP50552 380 aaPredicted RBP11.56□□□□□ -0.56
CCDC110-205ENST00000506962 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
CCDC110-205ENST00000506962 PELP1Q8IZL8 1130 aaKnown RBP11.55□□□□□ -0.56
CCDC110-205ENST00000506962 DCAF8Q5TAQ9 597 aa11.52□□□□□ -0.57
CCDC110-205ENST00000506962 TRPC6Q9Y210 931 aa11.52□□□□□ -0.57
CCDC110-205ENST00000506962 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
CCDC110-205ENST00000506962 ATMINO43313 823 aaPredicted RBP11.48□□□□□ -0.57
CCDC110-205ENST00000506962 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
CCDC110-205ENST00000506962 BAZ1AQ9NRL2 1556 aaPredicted RBP11.45□□□□□ -0.58
CCDC110-205ENST00000506962 ATN1P54259 1190 aaPredicted RBP11.45□□□□□ -0.58
CCDC110-205ENST00000506962 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
CCDC110-205ENST00000506962 PYGBP11216 843 aa11.44□□□□□ -0.58
CCDC110-205ENST00000506962 BMP2KQ9NSY1 1161 aaPredicted RBP11.43□□□□□ -0.58
CCDC110-205ENST00000506962 POTEB2H3BUK9 544 aa11.42□□□□□ -0.58
CCDC110-205ENST00000506962 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
CCDC110-205ENST00000506962 IFNLR1Q8IU57 520 aaPredicted RBP11.4□□□□□ -0.58
CCDC110-205ENST00000506962 METRNQ9UJH8 293 aa11.4□□□□□ -0.58
CCDC110-205ENST00000506962 SLC24A1O60721 1099 aa11.38□□□□□ -0.59
CCDC110-205ENST00000506962 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
CCDC110-205ENST00000506962 AMER1Q5JTC6 1135 aaPredicted RBP11.37□□□□□ -0.59
CCDC110-205ENST00000506962 SLC39A7Q92504 469 aa11.37□□□□□ -0.59
CCDC110-205ENST00000506962 TTLL13PA6NNM8 815 aa11.36□□□□□ -0.59
CCDC110-205ENST00000506962 TIE1P35590 1138 aa11.36□□□□□ -0.59
CCDC110-205ENST00000506962 SMARCA4P51532 1647 aa11.35□□□□□ -0.59
CCDC110-205ENST00000506962 C7P10643 843 aa11.35□□□□□ -0.59
CCDC110-205ENST00000506962 SGIP1Q9BQI5 828 aa11.35□□□□□ -0.59
CCDC110-205ENST00000506962 SMARCA2P51531 1590 aa11.34□□□□□ -0.59
CCDC110-205ENST00000506962 PCDHB8Q9UN66 801 aa11.33□□□□□ -0.6
CCDC110-205ENST00000506962 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
CCDC110-205ENST00000506962 GSE1Q14687 1217 aa11.31□□□□□ -0.6
CCDC110-205ENST00000506962 SPOCK2Q92563 424 aa11.31□□□□□ -0.6
CCDC110-205ENST00000506962 OTUD5Q96G74 571 aa11.31□□□□□ -0.6
CCDC110-205ENST00000506962 TMEM106CQ9BVX2 250 aa11.31□□□□□ -0.6
CCDC110-205ENST00000506962 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
CCDC110-205ENST00000506962 PEG3Q9GZU2 1588 aa11.3□□□□□ -0.6
CCDC110-205ENST00000506962 TRIM35Q9UPQ4 493 aa11.3□□□□□ -0.6
CCDC110-205ENST00000506962 ATAD2BQ9ULI0 1458 aa11.3□□□□□ -0.6
CCDC110-205ENST00000506962 MROH2BQ7Z745 1585 aa11.28□□□□□ -0.6
CCDC110-205ENST00000506962 RSF1Q96T23 1441 aaPredicted RBP11.27□□□□□ -0.6
CCDC110-205ENST00000506962 POTEFA5A3E0 1075 aa11.27□□□□□ -0.61
CCDC110-205ENST00000506962 POTEJP0CG39 1038 aa11.27□□□□□ -0.61
CCDC110-205ENST00000506962 SEC24BO95487 1268 aa11.26□□□□□ -0.61
CCDC110-205ENST00000506962 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
CCDC110-205ENST00000506962 COLQQ9Y215 455 aaPredicted RBP11.25□□□□□ -0.61
CCDC110-205ENST00000506962 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
CCDC110-205ENST00000506962 BAZ1BQ9UIG0 1483 aaKnown RBP11.23□□□□□ -0.61
CCDC110-205ENST00000506962 ZNF467Q7Z7K2 595 aaPredicted RBP11.17□□□□□ -0.62
CCDC110-205ENST00000506962 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
CCDC110-205ENST00000506962 IER5LQ5T953 404 aa11.14□□□□□ -0.63
CCDC110-205ENST00000506962 WIZO95785 1651 aa11.14□□□□□ -0.63
CCDC110-205ENST00000506962 PSEN1P49768 467 aa11.13□□□□□ -0.63
CCDC110-205ENST00000506962 MAMSTRQ6ZN01 415 aa11.13□□□□□ -0.63
CCDC110-205ENST00000506962 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
CCDC110-205ENST00000506962 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
CCDC110-205ENST00000506962 THOC2Q8NI27 1593 aaKnown RBP11.12□□□□□ -0.63
CCDC110-205ENST00000506962 PLCG2P16885 1265 aa11.12□□□□□ -0.63
CCDC110-205ENST00000506962 TOP2AP11388 1531 aaKnown RBP11.12□□□□□ -0.63
CCDC110-205ENST00000506962 SUPT5HO00267 1087 aaKnown RBP11.1□□□□□ -0.63
CCDC110-205ENST00000506962 IRX5P78411 483 aaPredicted RBP11.09□□□□□ -0.63
CCDC110-205ENST00000506962 NESP48681 1621 aa11.09□□□□□ -0.63
CCDC110-205ENST00000506962 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
CCDC110-205ENST00000506962 OCEL1Q9H607 264 aa11.06□□□□□ -0.64
CCDC110-205ENST00000506962 MKRN3Q13064 507 aaKnown RBP11.05□□□□□ -0.64
CCDC110-205ENST00000506962 PDAP1Q13442 181 aaKnown RBP11.05□□□□□ -0.64
CCDC110-205ENST00000506962 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
CCDC110-205ENST00000506962 CABP2Q9NPB3 220 aa11.02□□□□□ -0.65
CCDC110-205ENST00000506962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11□□□□□ -0.65
CCDC110-205ENST00000506962 CADPSQ9ULU8 1353 aa11□□□□□ -0.65
CCDC110-205ENST00000506962 SLAIN1Q8ND83 568 aa10.99□□□□□ -0.65
CCDC110-205ENST00000506962 RIMBP3CA6NJZ7 1639 aa10.98□□□□□ -0.65
CCDC110-205ENST00000506962 RIMBP3BA6NNM3 1639 aa10.98□□□□□ -0.65
CCDC110-205ENST00000506962 RIMBP3Q9UFD9 1639 aa10.98□□□□□ -0.65
CCDC110-205ENST00000506962 CCDC88BA6NC98 1476 aa10.98□□□□□ -0.65
CCDC110-205ENST00000506962 LAMC3Q9Y6N6 1575 aa10.98□□□□□ -0.65
CCDC110-205ENST00000506962 PDS5BQ9NTI5 1447 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms