RNA–Protein interactions for RNA: ENST00000506024.5

PDE4D-214, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-214ENST00000506024 IFNLR1Q8IU57 520 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-214ENST00000506024 EIF4G1Q04637 1599 aaKnown RBP8.91□□□□□ -0.98
PDE4D-214ENST00000506024 CD44P16070 742 aaKnown RBP8.86□□□□□ -0.99
PDE4D-214ENST00000506024 SPOCK2Q92563 424 aa8.86□□□□□ -0.99
PDE4D-214ENST00000506024 PAK3O75914 559 aaPredicted RBP8.85□□□□□ -0.99
PDE4D-214ENST00000506024 SCRIBQ14160 1630 aa8.84□□□□□ -0.99
PDE4D-214ENST00000506024 C19orf67A6NJJ6 358 aa8.84□□□□□ -0.99
PDE4D-214ENST00000506024 TSPYL2Q9H2G4 693 aaPredicted RBP8.84□□□□□ -0.99
PDE4D-214ENST00000506024 NUBP1P53384 320 aa8.82□□□□□ -1
PDE4D-214ENST00000506024 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
PDE4D-214ENST00000506024 RASEFQ8IZ41 740 aa8.81□□□□□ -1
PDE4D-214ENST00000506024 ZRANB1Q9UGI0 708 aa8.81□□□□□ -1
PDE4D-214ENST00000506024 ZCCHC6Q5VYS8 1495 aaKnown RBP8.8□□□□□ -1
PDE4D-214ENST00000506024 FAM212AQ96EL1 285 aa8.79□□□□□ -1
PDE4D-214ENST00000506024 DCAF1Q9Y4B6 1507 aa8.79□□□□□ -1
PDE4D-214ENST00000506024 EVX2Q03828 476 aa8.78□□□□□ -1
PDE4D-214ENST00000506024 CIZ1Q9ULV3 898 aaPredicted RBP8.78□□□□□ -1
PDE4D-214ENST00000506024 CUX2O14529 1486 aa8.75□□□□□ -1.01
PDE4D-214ENST00000506024 GSE1Q14687 1217 aa8.74□□□□□ -1.01
PDE4D-214ENST00000506024 PHF12Q96QT6 1004 aa8.71□□□□□ -1.02
PDE4D-214ENST00000506024 ZNF579Q8NAF0 562 aaKnown RBP8.7□□□□□ -1.02
PDE4D-214ENST00000506024 CCDC61Q9Y6R9 512 aa8.7□□□□□ -1.02
PDE4D-214ENST00000506024 SP7Q8TDD2 431 aaPredicted RBP8.69□□□□□ -1.02
PDE4D-214ENST00000506024 PYGBP11216 843 aa8.68□□□□□ -1.02
PDE4D-214ENST00000506024 ERCC6Q03468 1493 aa8.67□□□□□ -1.02
PDE4D-214ENST00000506024 GABBR2O75899 941 aa8.63□□□□□ -1.03
PDE4D-214ENST00000506024 KIF12Q96FN5 646 aa8.63□□□□□ -1.03
PDE4D-214ENST00000506024 MAP3K13O43283 966 aa8.62□□□□□ -1.03
PDE4D-214ENST00000506024 TRIM41Q8WV44 630 aa8.62□□□□□ -1.03
PDE4D-214ENST00000506024 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
PDE4D-214ENST00000506024 CLCN6P51797 869 aa8.61□□□□□ -1.03
PDE4D-214ENST00000506024 PCDHB13Q9Y5F0 798 aa8.61□□□□□ -1.03
PDE4D-214ENST00000506024 MS4A3Q96HJ5 214 aa8.6□□□□□ -1.03
PDE4D-214ENST00000506024 GALR2O43603 387 aaPredicted RBP8.59□□□□□ -1.03
PDE4D-214ENST00000506024 PKD2Q13563 968 aa8.59□□□□□ -1.03
PDE4D-214ENST00000506024 CHRM1P11229 460 aaPredicted RBP8.58□□□□□ -1.04
PDE4D-214ENST00000506024 AMER1Q5JTC6 1135 aaPredicted RBP8.56□□□□□ -1.04
PDE4D-214ENST00000506024 SGIP1Q9BQI5 828 aa8.56□□□□□ -1.04
PDE4D-214ENST00000506024 PCDHB8Q9UN66 801 aa8.56□□□□□ -1.04
PDE4D-214ENST00000506024 IFNL1Q8IU54 200 aa8.55□□□□□ -1.04
PDE4D-214ENST00000506024 ZNF467Q7Z7K2 595 aaPredicted RBP8.54□□□□□ -1.04
PDE4D-214ENST00000506024 DCBLD2Q96PD2 775 aa8.53□□□□□ -1.04
PDE4D-214ENST00000506024 RTN4Q9NQC3 1192 aaKnown RBP8.53□□□□□ -1.04
PDE4D-214ENST00000506024 NCAPD3P42695 1498 aa8.52□□□□□ -1.05
PDE4D-214ENST00000506024 TRPC6Q9Y210 931 aa8.5□□□□□ -1.05
PDE4D-214ENST00000506024 RIOK3O14730 519 aaKnown RBP8.49□□□□□ -1.05
PDE4D-214ENST00000506024 RGL2O15211 777 aa8.49□□□□□ -1.05
PDE4D-214ENST00000506024 NESP48681 1621 aa8.49□□□□□ -1.05
PDE4D-214ENST00000506024 THOC2Q8NI27 1593 aaKnown RBP8.48□□□□□ -1.05
PDE4D-214ENST00000506024 ATAD2BQ9ULI0 1458 aa8.47□□□□□ -1.05
PDE4D-214ENST00000506024 RNF25Q96BH1 459 aaPredicted RBP8.47□□□□□ -1.05
PDE4D-214ENST00000506024 HMGXB3Q12766 1538 aa8.46□□□□□ -1.05
PDE4D-214ENST00000506024 PSEN1P49768 467 aa8.46□□□□□ -1.06
PDE4D-214ENST00000506024 PDAP1Q13442 181 aaKnown RBP8.46□□□□□ -1.06
PDE4D-214ENST00000506024 TMEM106CQ9BVX2 250 aa8.46□□□□□ -1.06
PDE4D-214ENST00000506024 TAOK2Q9UL54 1235 aa8.46□□□□□ -1.06
PDE4D-214ENST00000506024 TIE1P35590 1138 aa8.45□□□□□ -1.06
PDE4D-214ENST00000506024 BMP2KQ9NSY1 1161 aaPredicted RBP8.45□□□□□ -1.06
PDE4D-214ENST00000506024 VGFO15240 615 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-214ENST00000506024 SMARCA2P51531 1590 aa8.44□□□□□ -1.06
PDE4D-214ENST00000506024 TTLL13PA6NNM8 815 aa8.43□□□□□ -1.06
PDE4D-214ENST00000506024 ATMINO43313 823 aaPredicted RBP8.42□□□□□ -1.06
PDE4D-214ENST00000506024 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.41□□□□□ -1.06
PDE4D-214ENST00000506024 POTEIP0CG38 1075 aa8.41□□□□□ -1.06
PDE4D-214ENST00000506024 ATN1P54259 1190 aaPredicted RBP8.41□□□□□ -1.06
PDE4D-214ENST00000506024 ZFP91Q96JP5 570 aaPredicted RBP8.41□□□□□ -1.06
PDE4D-214ENST00000506024 GOLGA2Q08379 1002 aa8.4□□□□□ -1.06
PDE4D-214ENST00000506024 ASTLQ6HA08 431 aaPredicted RBP8.4□□□□□ -1.06
PDE4D-214ENST00000506024 BAZ1BQ9UIG0 1483 aaKnown RBP8.39□□□□□ -1.07
PDE4D-214ENST00000506024 TRIM35Q9UPQ4 493 aa8.39□□□□□ -1.07
PDE4D-214ENST00000506024 SMARCA4P51532 1647 aa8.39□□□□□ -1.07
PDE4D-214ENST00000506024 STK25O00506 426 aa8.38□□□□□ -1.07
PDE4D-214ENST00000506024 LAMC3Q9Y6N6 1575 aa8.38□□□□□ -1.07
PDE4D-214ENST00000506024 PELP1Q8IZL8 1130 aaKnown RBP8.37□□□□□ -1.07
PDE4D-214ENST00000506024 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
PDE4D-214ENST00000506024 CABP2Q9NPB3 220 aa8.37□□□□□ -1.07
PDE4D-214ENST00000506024 STK24Q9Y6E0 443 aa8.37□□□□□ -1.07
PDE4D-214ENST00000506024 PDS5BQ9NTI5 1447 aa8.36□□□□□ -1.07
PDE4D-214ENST00000506024 KIF21AQ7Z4S6 1674 aa8.35□□□□□ -1.07
PDE4D-214ENST00000506024 CHGAP10645 457 aaKnown RBP8.35□□□□□ -1.07
PDE4D-214ENST00000506024 MKRN3Q13064 507 aaKnown RBP8.35□□□□□ -1.07
PDE4D-214ENST00000506024 SLC39A7Q92504 469 aa8.34□□□□□ -1.07
PDE4D-214ENST00000506024 MRC2Q9UBG0 1479 aa8.32□□□□□ -1.08
PDE4D-214ENST00000506024 BAZ1AQ9NRL2 1556 aaPredicted RBP8.31□□□□□ -1.08
PDE4D-214ENST00000506024 SEC24BO95487 1268 aa8.31□□□□□ -1.08
PDE4D-214ENST00000506024 C7P10643 843 aa8.31□□□□□ -1.08
PDE4D-214ENST00000506024 EFCAB3Q8N7B9 438 aa8.31□□□□□ -1.08
PDE4D-214ENST00000506024 METRNQ9UJH8 293 aa8.31□□□□□ -1.08
PDE4D-214ENST00000506024 PEG3Q9GZU2 1588 aa8.31□□□□□ -1.08
PDE4D-214ENST00000506024 WDR62O43379 1518 aa8.3□□□□□ -1.08
PDE4D-214ENST00000506024 IER5LQ5T953 404 aa8.29□□□□□ -1.08
PDE4D-214ENST00000506024 HS6ST3Q8IZP7 471 aa8.29□□□□□ -1.08
PDE4D-214ENST00000506024 PLCG2P16885 1265 aa8.27□□□□□ -1.09
PDE4D-214ENST00000506024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.27□□□□□ -1.093e-6■■■■□ 25.8
PDE4D-214ENST00000506024 CADPSQ9ULU8 1353 aa8.26□□□□□ -1.09
PDE4D-214ENST00000506024 SOX12O15370 315 aa8.24□□□□□ -1.09
PDE4D-214ENST00000506024 OCEL1Q9H607 264 aa8.24□□□□□ -1.09
PDE4D-214ENST00000506024 COLQQ9Y215 455 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-214ENST00000506024 IRX5P78411 483 aaPredicted RBP8.23□□□□□ -1.09
PDE4D-214ENST00000506024 PHF8Q9UPP1 1060 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms