RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 PABPN1Q86U42 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
SNX25-203ENST00000504959 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
SNX25-203ENST00000504959 PRKAR2AP13861 404 aaKnown RBP10.09□□□□□ -0.79
SNX25-203ENST00000504959 PLCD3Q8N3E9 789 aa10.04□□□□□ -0.8
SNX25-203ENST00000504959 CHGAP10645 457 aaKnown RBP10.02□□□□□ -0.81
SNX25-203ENST00000504959 EVX2Q03828 476 aa10.02□□□□□ -0.81
SNX25-203ENST00000504959 STAG3Q9UJ98 1225 aa10.02□□□□□ -0.81
SNX25-203ENST00000504959 PRR29P0C7W0 189 aa10.01□□□□□ -0.81
SNX25-203ENST00000504959 ZCCHC6Q5VYS8 1495 aaKnown RBP10□□□□□ -0.81
SNX25-203ENST00000504959 CHADLQ6NUI6 762 aa9.98□□□□□ -0.81
SNX25-203ENST00000504959 MIER1Q8N108 512 aa9.98□□□□□ -0.81
SNX25-203ENST00000504959 SHROOM4Q9ULL8 1493 aa9.96□□□□□ -0.82
SNX25-203ENST00000504959 C19orf67A6NJJ6 358 aa9.96□□□□□ -0.82
SNX25-203ENST00000504959 DNAJC5Q9H3Z4 198 aa9.96□□□□□ -0.82
SNX25-203ENST00000504959 CIZ1Q9ULV3 898 aaPredicted RBP9.96□□□□□ -0.82
SNX25-203ENST00000504959 NBR1Q14596 966 aa9.93□□□□□ -0.82
SNX25-203ENST00000504959 TIMELESSQ9UNS1 1208 aa9.89□□□□□ -0.83
SNX25-203ENST00000504959 HS6ST3Q8IZP7 471 aa9.87□□□□□ -0.83
SNX25-203ENST00000504959 RNF25Q96BH1 459 aaPredicted RBP9.85□□□□□ -0.83
SNX25-203ENST00000504959 FARP1Q9Y4F1 1045 aaPredicted RBP9.85□□□□□ -0.83
SNX25-203ENST00000504959 TULP1O00294 542 aaPredicted RBP9.84□□□□□ -0.83
SNX25-203ENST00000504959 NKX1-1Q15270 411 aaPredicted RBP9.81□□□□□ -0.84
SNX25-203ENST00000504959 ZBTB47Q9UFB7 747 aaPredicted RBP9.8□□□□□ -0.84
SNX25-203ENST00000504959 GABBR2O75899 941 aa9.79□□□□□ -0.84
SNX25-203ENST00000504959 CREBZFQ9NS37 354 aa9.79□□□□□ -0.84
SNX25-203ENST00000504959 TRIM41Q8WV44 630 aa9.78□□□□□ -0.84
SNX25-203ENST00000504959 DCAF1Q9Y4B6 1507 aa9.77□□□□□ -0.84
SNX25-203ENST00000504959 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
SNX25-203ENST00000504959 CD44P16070 742 aaKnown RBP9.77□□□□□ -0.85
SNX25-203ENST00000504959 GTF3C3Q9Y5Q9 886 aa9.76□□□□□ -0.85
SNX25-203ENST00000504959 GTPBP6O43824 516 aaPredicted RBP9.74□□□□□ -0.85
SNX25-203ENST00000504959 ABCC9O60706 1549 aa9.74□□□□□ -0.85
SNX25-203ENST00000504959 SUPT5HO00267 1087 aaKnown RBP9.71□□□□□ -0.85
SNX25-203ENST00000504959 GSE1Q14687 1217 aa9.68□□□□□ -0.86
SNX25-203ENST00000504959 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
SNX25-203ENST00000504959 NUBP1P53384 320 aa9.67□□□□□ -0.86
SNX25-203ENST00000504959 CLCN6P51797 869 aa9.66□□□□□ -0.86
SNX25-203ENST00000504959 STK25O00506 426 aa9.65□□□□□ -0.86
SNX25-203ENST00000504959 ZNF579Q8NAF0 562 aaKnown RBP9.64□□□□□ -0.87
SNX25-203ENST00000504959 ZRANB1Q9UGI0 708 aa9.64□□□□□ -0.87
SNX25-203ENST00000504959 MNX1P50219 401 aaPredicted RBP9.62□□□□□ -0.87
SNX25-203ENST00000504959 DCAF8Q5TAQ9 597 aa9.62□□□□□ -0.87
SNX25-203ENST00000504959 TMEM132AQ24JP5 1023 aa9.6□□□□□ -0.87
SNX25-203ENST00000504959 POTEIP0CG38 1075 aa9.59□□□□□ -0.87
SNX25-203ENST00000504959 VGFO15240 615 aaPredicted RBP9.57□□□□□ -0.88
SNX25-203ENST00000504959 ARXQ96QS3 562 aa9.57□□□□□ -0.88
SNX25-203ENST00000504959 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
SNX25-203ENST00000504959 MYO15BQ96JP2 1530 aa9.56□□□□□ -0.88
SNX25-203ENST00000504959 BCL11BQ9C0K0 894 aaPredicted RBP9.55□□□□□ -0.88
SNX25-203ENST00000504959 STK24Q9Y6E0 443 aa9.54□□□□□ -0.88
SNX25-203ENST00000504959 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.53□□□□□ -0.88
SNX25-203ENST00000504959 ZFP91Q96JP5 570 aaPredicted RBP9.53□□□□□ -0.88
SNX25-203ENST00000504959 LHX8Q68G74 356 aa9.53□□□□□ -0.88
SNX25-203ENST00000504959 ERICH6Q7L0X2 663 aa9.53□□□□□ -0.88
SNX25-203ENST00000504959 FAM212AQ96EL1 285 aa9.53□□□□□ -0.88
SNX25-203ENST00000504959 SCRIBQ14160 1630 aa9.52□□□□□ -0.88
SNX25-203ENST00000504959 DCBLD2Q96PD2 775 aa9.51□□□□□ -0.89
SNX25-203ENST00000504959 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
SNX25-203ENST00000504959 GALR2O43603 387 aaPredicted RBP9.51□□□□□ -0.89
SNX25-203ENST00000504959 P3H3Q8IVL6 736 aa9.49□□□□□ -0.89
SNX25-203ENST00000504959 SGIP1Q9BQI5 828 aa9.49□□□□□ -0.89
SNX25-203ENST00000504959 NACADO15069 1562 aa9.49□□□□□ -0.89
SNX25-203ENST00000504959 CHRM1P11229 460 aaPredicted RBP9.49□□□□□ -0.89
SNX25-203ENST00000504959 RASEFQ8IZ41 740 aa9.49□□□□□ -0.89
SNX25-203ENST00000504959 KCNV2Q8TDN2 545 aa9.49□□□□□ -0.89
SNX25-203ENST00000504959 C14orf37Q86TY3 774 aa9.48□□□□□ -0.89
SNX25-203ENST00000504959 LMOD2Q6P5Q4 547 aa9.47□□□□□ -0.89
SNX25-203ENST00000504959 RYDENQ9NUL5 291 aaKnown RBP9.47□□□□□ -0.89
SNX25-203ENST00000504959 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNX25-203ENST00000504959 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
SNX25-203ENST00000504959 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
SNX25-203ENST00000504959 RB1CC1Q8TDY2 1594 aa9.46□□□□□ -0.9
SNX25-203ENST00000504959 PYGBP11216 843 aa9.45□□□□□ -0.9
SNX25-203ENST00000504959 BRPF1P55201 1214 aaPredicted RBP9.42□□□□□ -0.9
SNX25-203ENST00000504959 TSPYL2Q9H2G4 693 aaPredicted RBP9.41□□□□□ -0.9
SNX25-203ENST00000504959 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
SNX25-203ENST00000504959 WDR70Q9NW82 654 aa9.39□□□□□ -0.91
SNX25-203ENST00000504959 CCDC61Q9Y6R9 512 aa9.38□□□□□ -0.91
SNX25-203ENST00000504959 HOMEZQ8IX15 550 aa9.38□□□□□ -0.91
SNX25-203ENST00000504959 PELP1Q8IZL8 1130 aaKnown RBP9.33□□□□□ -0.92
SNX25-203ENST00000504959 KIF12Q96FN5 646 aa9.33□□□□□ -0.92
SNX25-203ENST00000504959 ASTLQ6HA08 431 aaPredicted RBP9.32□□□□□ -0.92
SNX25-203ENST00000504959 ZC3H15Q8WU90 426 aaKnown RBP9.32□□□□□ -0.92
SNX25-203ENST00000504959 ATMINO43313 823 aaPredicted RBP9.3□□□□□ -0.92
SNX25-203ENST00000504959 RSF1Q96T23 1441 aaPredicted RBP9.3□□□□□ -0.92
SNX25-203ENST00000504959 NEUROD2Q15784 382 aa9.29□□□□□ -0.92
SNX25-203ENST00000504959 SLC24A3Q9HC58 644 aa9.28□□□□□ -0.92
SNX25-203ENST00000504959 POTEB2H3BUK9 544 aa9.28□□□□□ -0.92
SNX25-203ENST00000504959 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
SNX25-203ENST00000504959 SEMA3EO15041 775 aa9.26□□□□□ -0.93
SNX25-203ENST00000504959 MAP3K13O43283 966 aa9.26□□□□□ -0.93
SNX25-203ENST00000504959 ARHGEF1Q92888 912 aaKnown RBP9.26□□□□□ -0.93
SNX25-203ENST00000504959 SLC39A7Q92504 469 aa9.25□□□□□ -0.93
SNX25-203ENST00000504959 UNC13AQ9UPW8 1703 aa9.25□□□□□ -0.93
SNX25-203ENST00000504959 ZNF467Q7Z7K2 595 aaPredicted RBP9.24□□□□□ -0.93
SNX25-203ENST00000504959 METRNQ9UJH8 293 aa9.24□□□□□ -0.93
SNX25-203ENST00000504959 C7P10643 843 aa9.23□□□□□ -0.93
SNX25-203ENST00000504959 PDAP1Q13442 181 aaKnown RBP9.23□□□□□ -0.93
SNX25-203ENST00000504959 PCDHB8Q9UN66 801 aa9.23□□□□□ -0.93
SNX25-203ENST00000504959 TRPC6Q9Y210 931 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms