RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 CD44P16070 742 aaKnown RBP15.02■□□□□ -0
CASC9-201ENST00000504531 NUBP1P53384 320 aa15□□□□□ -0.01
CASC9-201ENST00000504531 FAM212AQ96EL1 285 aa14.96□□□□□ -0.01
CASC9-201ENST00000504531 RASEFQ8IZ41 740 aa14.95□□□□□ -0.02
CASC9-201ENST00000504531 SUPT5HO00267 1087 aaKnown RBP14.92□□□□□ -0.02
CASC9-201ENST00000504531 NACADO15069 1562 aa14.92□□□□□ -0.02
CASC9-201ENST00000504531 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
CASC9-201ENST00000504531 GSE1Q14687 1217 aa14.9□□□□□ -0.02
CASC9-201ENST00000504531 TSPYL2Q9H2G4 693 aaPredicted RBP14.9□□□□□ -0.02
CASC9-201ENST00000504531 DCAF8Q5TAQ9 597 aa14.88□□□□□ -0.03
CASC9-201ENST00000504531 EVX2Q03828 476 aa14.84□□□□□ -0.03
CASC9-201ENST00000504531 ZNF579Q8NAF0 562 aaKnown RBP14.84□□□□□ -0.03
CASC9-201ENST00000504531 CIZ1Q9ULV3 898 aaPredicted RBP14.82□□□□□ -0.04
CASC9-201ENST00000504531 CLCN6P51797 869 aa14.81□□□□□ -0.04
CASC9-201ENST00000504531 CCDC61Q9Y6R9 512 aa14.81□□□□□ -0.04
CASC9-201ENST00000504531 SP7Q8TDD2 431 aaPredicted RBP14.77□□□□□ -0.05
CASC9-201ENST00000504531 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
CASC9-201ENST00000504531 PHF12Q96QT6 1004 aa14.72□□□□□ -0.05
CASC9-201ENST00000504531 CHRM1P11229 460 aaPredicted RBP14.68□□□□□ -0.06
CASC9-201ENST00000504531 KIF12Q96FN5 646 aa14.67□□□□□ -0.06
CASC9-201ENST00000504531 SGIP1Q9BQI5 828 aa14.67□□□□□ -0.06
CASC9-201ENST00000504531 PYGBP11216 843 aa14.66□□□□□ -0.06
CASC9-201ENST00000504531 GABBR2O75899 941 aa14.63□□□□□ -0.07
CASC9-201ENST00000504531 AMER1Q5JTC6 1135 aaPredicted RBP14.63□□□□□ -0.07
CASC9-201ENST00000504531 BICRAQ9NZM4 1560 aa14.61□□□□□ -0.07
CASC9-201ENST00000504531 MAP3K13O43283 966 aa14.61□□□□□ -0.07
CASC9-201ENST00000504531 PKD2Q13563 968 aa14.6□□□□□ -0.07
CASC9-201ENST00000504531 PCDHB13Q9Y5F0 798 aa14.6□□□□□ -0.07
CASC9-201ENST00000504531 ECM2O94769 699 aaPredicted RBP14.59□□□□□ -0.07
CASC9-201ENST00000504531 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
CASC9-201ENST00000504531 UNC13AQ9UPW8 1703 aa14.56□□□□□ -0.08
CASC9-201ENST00000504531 ZNF467Q7Z7K2 595 aaPredicted RBP14.56□□□□□ -0.08
CASC9-201ENST00000504531 MS4A3Q96HJ5 214 aa14.56□□□□□ -0.08
CASC9-201ENST00000504531 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
CASC9-201ENST00000504531 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
CASC9-201ENST00000504531 GALR2O43603 387 aaPredicted RBP14.54□□□□□ -0.08
CASC9-201ENST00000504531 IFNL1Q8IU54 200 aa14.5□□□□□ -0.09
CASC9-201ENST00000504531 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
CASC9-201ENST00000504531 CC2D2AQ9P2K1 1620 aa14.46□□□□□ -0.09
CASC9-201ENST00000504531 TAOK2Q9UL54 1235 aa14.46□□□□□ -0.09
CASC9-201ENST00000504531 DCBLD2Q96PD2 775 aa14.45□□□□□ -0.1
CASC9-201ENST00000504531 RTN4Q9NQC3 1192 aaKnown RBP14.45□□□□□ -0.1
CASC9-201ENST00000504531 PCDHB8Q9UN66 801 aa14.45□□□□□ -0.1
CASC9-201ENST00000504531 RIOK3O14730 519 aaKnown RBP14.44□□□□□ -0.1
CASC9-201ENST00000504531 TIE1P35590 1138 aa14.42□□□□□ -0.1
CASC9-201ENST00000504531 RNF25Q96BH1 459 aaPredicted RBP14.41□□□□□ -0.1
CASC9-201ENST00000504531 PDAP1Q13442 181 aaKnown RBP14.4□□□□□ -0.1
CASC9-201ENST00000504531 RGL2O15211 777 aa14.39□□□□□ -0.11
CASC9-201ENST00000504531 VGFO15240 615 aaPredicted RBP14.39□□□□□ -0.11
CASC9-201ENST00000504531 TRPC6Q9Y210 931 aa14.36□□□□□ -0.11
CASC9-201ENST00000504531 PSEN1P49768 467 aa14.35□□□□□ -0.11
CASC9-201ENST00000504531 ASTLQ6HA08 431 aaPredicted RBP14.34□□□□□ -0.11
CASC9-201ENST00000504531 BMP2KQ9NSY1 1161 aaPredicted RBP14.34□□□□□ -0.11
CASC9-201ENST00000504531 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
CASC9-201ENST00000504531 TMEM106CQ9BVX2 250 aa14.33□□□□□ -0.12
CASC9-201ENST00000504531 TTLL13PA6NNM8 815 aa14.31□□□□□ -0.12
CASC9-201ENST00000504531 ATMINO43313 823 aaPredicted RBP14.31□□□□□ -0.12
CASC9-201ENST00000504531 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
CASC9-201ENST00000504531 POTEIP0CG38 1075 aa14.27□□□□□ -0.13
CASC9-201ENST00000504531 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
CASC9-201ENST00000504531 ATN1P54259 1190 aaPredicted RBP14.26□□□□□ -0.13
CASC9-201ENST00000504531 ZFP91Q96JP5 570 aaPredicted RBP14.26□□□□□ -0.13
CASC9-201ENST00000504531 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
CASC9-201ENST00000504531 TRIM35Q9UPQ4 493 aa14.23□□□□□ -0.13
CASC9-201ENST00000504531 GOLGA2Q08379 1002 aa14.22□□□□□ -0.13
CASC9-201ENST00000504531 STK25O00506 426 aa14.2□□□□□ -0.14
CASC9-201ENST00000504531 SLC39A7Q92504 469 aa14.19□□□□□ -0.14
CASC9-201ENST00000504531 IER5LQ5T953 404 aa14.17□□□□□ -0.14
CASC9-201ENST00000504531 BCL11BQ9C0K0 894 aaPredicted RBP14.17□□□□□ -0.14
CASC9-201ENST00000504531 CABP2Q9NPB3 220 aa14.17□□□□□ -0.14
CASC9-201ENST00000504531 C7P10643 843 aa14.16□□□□□ -0.14
CASC9-201ENST00000504531 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
CASC9-201ENST00000504531 STK24Q9Y6E0 443 aa14.16□□□□□ -0.14
CASC9-201ENST00000504531 MKRN3Q13064 507 aaKnown RBP14.15□□□□□ -0.14
CASC9-201ENST00000504531 HS6ST3Q8IZP7 471 aa14.15□□□□□ -0.14
CASC9-201ENST00000504531 CHGAP10645 457 aaKnown RBP14.13□□□□□ -0.15
CASC9-201ENST00000504531 WIZO95785 1651 aa14.13□□□□□ -0.15
CASC9-201ENST00000504531 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
CASC9-201ENST00000504531 TOP2AP11388 1531 aaKnown RBP14.11□□□□□ -0.15
CASC9-201ENST00000504531 HRCP23327 699 aa14.1□□□□□ -0.15
CASC9-201ENST00000504531 METRNQ9UJH8 293 aa14.1□□□□□ -0.15
CASC9-201ENST00000504531 EFCAB3Q8N7B9 438 aa14.07□□□□□ -0.16
CASC9-201ENST00000504531 SOX12O15370 315 aa14.06□□□□□ -0.16
CASC9-201ENST00000504531 SEC24BO95487 1268 aa14.06□□□□□ -0.16
CASC9-201ENST00000504531 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
CASC9-201ENST00000504531 LOC105371045A0A1W2PR82 267 aa14.03□□□□□ -0.16
CASC9-201ENST00000504531 ERCC6Q03468 1493 aa14.03□□□□□ -0.16
CASC9-201ENST00000504531 PLCG2P16885 1265 aa14.02□□□□□ -0.17
CASC9-201ENST00000504531 IRX5P78411 483 aaPredicted RBP14.02□□□□□ -0.17
CASC9-201ENST00000504531 OCEL1Q9H607 264 aa14.01□□□□□ -0.17
CASC9-201ENST00000504531 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.17
CASC9-201ENST00000504531 TRIM26Q12899 539 aaPredicted RBP14□□□□□ -0.17
CASC9-201ENST00000504531 NLRP6P59044 892 aa13.97□□□□□ -0.17
CASC9-201ENST00000504531 ILDR1Q86SU0 546 aaPredicted RBP13.97□□□□□ -0.17
CASC9-201ENST00000504531 CUX2O14529 1486 aa13.96□□□□□ -0.17
CASC9-201ENST00000504531 SMARCA2P51531 1590 aa13.96□□□□□ -0.18
CASC9-201ENST00000504531 PCGF6Q9BYE7 350 aa13.95□□□□□ -0.18
CASC9-201ENST00000504531 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
CASC9-201ENST00000504531 POTEFA5A3E0 1075 aa13.94□□□□□ -0.18
CASC9-201ENST00000504531 RYDENQ9NUL5 291 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms