RNA–Protein interactions for RNA: ENST00000502448.5

NFXL1-204, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 1,760 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-204ENST00000502448 METRNQ9UJH8 293 aa9.97□□□□□ -0.81
NFXL1-204ENST00000502448 ARXQ96QS3 562 aa9.96□□□□□ -0.82
NFXL1-204ENST00000502448 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
NFXL1-204ENST00000502448 ZRANB1Q9UGI0 708 aa9.95□□□□□ -0.82
NFXL1-204ENST00000502448 ATF5Q9Y2D1 282 aaPredicted RBP9.9□□□□□ -0.82
NFXL1-204ENST00000502448 C7P10643 843 aa9.88□□□□□ -0.83
NFXL1-204ENST00000502448 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
NFXL1-204ENST00000502448 TIMELESSQ9UNS1 1208 aa9.86□□□□□ -0.83
NFXL1-204ENST00000502448 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
NFXL1-204ENST00000502448 HAP1P54257 671 aaPredicted RBP9.83□□□□□ -0.84
NFXL1-204ENST00000502448 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
NFXL1-204ENST00000502448 SSUH2Q9Y2M2 353 aa9.77□□□□□ -0.85
NFXL1-204ENST00000502448 ST18O60284 1047 aa9.76□□□□□ -0.85
NFXL1-204ENST00000502448 ASTLQ6HA08 431 aaPredicted RBP9.75□□□□□ -0.85
NFXL1-204ENST00000502448 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
NFXL1-204ENST00000502448 ZNF692Q9BU19 519 aaPredicted RBP9.71□□□□□ -0.85
NFXL1-204ENST00000502448 ATMINO43313 823 aaPredicted RBP9.7□□□□□ -0.86
NFXL1-204ENST00000502448 PHF12Q96QT6 1004 aa9.68□□□□□ -0.86
NFXL1-204ENST00000502448 ERICH6Q7L0X2 663 aa9.65□□□□□ -0.86
NFXL1-204ENST00000502448 ATXN8OSP0DMR3 200 aa9.63□□□□□ -0.87
NFXL1-204ENST00000502448 FBLN2P98095 1184 aa9.63□□□□□ -0.87
NFXL1-204ENST00000502448 HOMEZQ8IX15 550 aa9.63□□□□□ -0.87
NFXL1-204ENST00000502448 GTF3C3Q9Y5Q9 886 aa9.59□□□□□ -0.87
NFXL1-204ENST00000502448 POTEFA5A3E0 1075 aa9.58□□□□□ -0.88
NFXL1-204ENST00000502448 KDM2AQ9Y2K7 1162 aa9.58□□□□□ -0.88
NFXL1-204ENST00000502448 PAK3O75914 559 aaPredicted RBP9.53□□□□□ -0.88
NFXL1-204ENST00000502448 TMEM121BQ9BXQ6 578 aaPredicted RBP9.52□□□□□ -0.88
NFXL1-204ENST00000502448 PABPN1Q86U42 306 aaKnown RBP eCLIP9.52□□□□□ -0.89
NFXL1-204ENST00000502448 MS4A3Q96HJ5 214 aa9.5□□□□□ -0.89
NFXL1-204ENST00000502448 ATN1P54259 1190 aaPredicted RBP9.48□□□□□ -0.89
NFXL1-204ENST00000502448 SLAIN1Q8ND83 568 aa9.47□□□□□ -0.89
NFXL1-204ENST00000502448 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
NFXL1-204ENST00000502448 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
NFXL1-204ENST00000502448 NISCHQ9Y2I1 1504 aa9.44□□□□□ -0.9
NFXL1-204ENST00000502448 MARVELD3Q96A59 401 aa9.44□□□□□ -0.9
NFXL1-204ENST00000502448 TMEM132AQ24JP5 1023 aa9.42□□□□□ -0.9
NFXL1-204ENST00000502448 DCAF8L2P0C7V8 631 aa9.4□□□□□ -0.91
NFXL1-204ENST00000502448 RANGAP1P46060 587 aaPredicted RBP9.36□□□□□ -0.91
NFXL1-204ENST00000502448 MKRN4PQ13434 485 aaPredicted RBP9.36□□□□□ -0.91
NFXL1-204ENST00000502448 CREBZFQ9NS37 354 aa9.35□□□□□ -0.91
NFXL1-204ENST00000502448 FBXO3Q9UK99 471 aa9.35□□□□□ -0.91
NFXL1-204ENST00000502448 COLQQ9Y215 455 aaPredicted RBP9.35□□□□□ -0.91
NFXL1-204ENST00000502448 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
NFXL1-204ENST00000502448 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.32□□□□□ -0.92
NFXL1-204ENST00000502448 SEC24BO95487 1268 aa9.32□□□□□ -0.92
NFXL1-204ENST00000502448 PKD2Q13563 968 aa9.32□□□□□ -0.92
NFXL1-204ENST00000502448 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
NFXL1-204ENST00000502448 C14orf37Q86TY3 774 aa9.28□□□□□ -0.92
NFXL1-204ENST00000502448 SNPHO15079 494 aa9.26□□□□□ -0.93
NFXL1-204ENST00000502448 PAXIP1Q6ZW49 1069 aaPredicted RBP9.26□□□□□ -0.93
NFXL1-204ENST00000502448 PODXL2Q9NZ53 605 aa9.25□□□□□ -0.93
NFXL1-204ENST00000502448 BMP2KQ9NSY1 1161 aaPredicted RBP9.24□□□□□ -0.93
NFXL1-204ENST00000502448 POTEB3A0JP26 581 aa9.24□□□□□ -0.93
NFXL1-204ENST00000502448 EMP3P54852 163 aa9.24□□□□□ -0.93
NFXL1-204ENST00000502448 POTEBQ6S5H4 581 aa9.24□□□□□ -0.93
NFXL1-204ENST00000502448 VASPP50552 380 aaPredicted RBP9.23□□□□□ -0.93
NFXL1-204ENST00000502448 HS3ST6Q96QI5 342 aa9.23□□□□□ -0.93
NFXL1-204ENST00000502448 DNAJC5Q9H3Z4 198 aa9.23□□□□□ -0.93
NFXL1-204ENST00000502448 NBR1Q14596 966 aa9.22□□□□□ -0.93
NFXL1-204ENST00000502448 NPM1P06748 294 aaKnown RBP eCLIP9.19□□□□□ -0.94
NFXL1-204ENST00000502448 IFNLR1Q8IU57 520 aaPredicted RBP9.19□□□□□ -0.94
NFXL1-204ENST00000502448 CFAP44Q96MT7 982 aa9.19□□□□□ -0.94
NFXL1-204ENST00000502448 TSHZ2Q9NRE2 1034 aa9.19□□□□□ -0.94
NFXL1-204ENST00000502448 FAM205CA6NFA0 338 aa9.16□□□□□ -0.94
NFXL1-204ENST00000502448 PROM2Q8N271 834 aa9.13□□□□□ -0.95
NFXL1-204ENST00000502448 SPRYD3Q8NCJ5 442 aa9.12□□□□□ -0.95
NFXL1-204ENST00000502448 TRPC6Q9Y210 931 aa9.12□□□□□ -0.95
NFXL1-204ENST00000502448 TIE1P35590 1138 aa9.11□□□□□ -0.95
NFXL1-204ENST00000502448 MYT1LQ9UL68 1186 aa9.11□□□□□ -0.95
NFXL1-204ENST00000502448 IER5LQ5T953 404 aa9.08□□□□□ -0.96
NFXL1-204ENST00000502448 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
NFXL1-204ENST00000502448 TTLL13PA6NNM8 815 aa9.02□□□□□ -0.97
NFXL1-204ENST00000502448 NPM2Q86SE8 214 aaKnown RBP9.01□□□□□ -0.97
NFXL1-204ENST00000502448 SUPT5HO00267 1087 aaKnown RBP8.99□□□□□ -0.97
NFXL1-204ENST00000502448 KIF12Q96FN5 646 aa8.99□□□□□ -0.97
NFXL1-204ENST00000502448 SPDYE4A6NLX3 237 aa8.99□□□□□ -0.97
NFXL1-204ENST00000502448 ECM2O94769 699 aaPredicted RBP8.98□□□□□ -0.97
NFXL1-204ENST00000502448 MNX1P50219 401 aaPredicted RBP8.98□□□□□ -0.97
NFXL1-204ENST00000502448 TRIM35Q9UPQ4 493 aa8.97□□□□□ -0.97
NFXL1-204ENST00000502448 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
NFXL1-204ENST00000502448 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.94□□□□□ -0.98
NFXL1-204ENST00000502448 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
NFXL1-204ENST00000502448 CCDC61Q9Y6R9 512 aa8.94□□□□□ -0.98
NFXL1-204ENST00000502448 STAG3Q9UJ98 1225 aa8.93□□□□□ -0.98
NFXL1-204ENST00000502448 PLCG2P16885 1265 aa8.92□□□□□ -0.98
NFXL1-204ENST00000502448 UBTFP17480 764 aaKnown RBP8.92□□□□□ -0.98
NFXL1-204ENST00000502448 RGL2O15211 777 aa8.91□□□□□ -0.98
NFXL1-204ENST00000502448 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
NFXL1-204ENST00000502448 HRCP23327 699 aa8.87□□□□□ -0.99
NFXL1-204ENST00000502448 SPOCK2Q92563 424 aa8.86□□□□□ -0.99
NFXL1-204ENST00000502448 MAP3K13O43283 966 aa8.86□□□□□ -0.99
NFXL1-204ENST00000502448 PTGER2P43116 358 aa8.84□□□□□ -0.99
NFXL1-204ENST00000502448 BRPF1P55201 1214 aaPredicted RBP8.83□□□□□ -1
NFXL1-204ENST00000502448 IRX2Q9BZI1 471 aaPredicted RBP8.81□□□□□ -1
NFXL1-204ENST00000502448 CHGAP10645 457 aaKnown RBP8.8□□□□□ -1
NFXL1-204ENST00000502448 IRX5P78411 483 aaPredicted RBP8.79□□□□□ -1
NFXL1-204ENST00000502448 HS6ST3Q8IZP7 471 aa8.73□□□□□ -1.01
NFXL1-204ENST00000502448 ERBB3P21860 1342 aa8.73□□□□□ -1.01
NFXL1-204ENST00000502448 OCEL1Q9H607 264 aa8.7□□□□□ -1.02
NFXL1-204ENST00000502448 TTBK1Q5TCY1 1321 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms