RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 PLEKHD1A6NEE1 506 aa15.02□□□□□ -0.01
LRRC55-201ENST00000497933 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
LRRC55-201ENST00000497933 TMC1Q8TDI8 760 aa15.01□□□□□ -0.01
LRRC55-201ENST00000497933 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
LRRC55-201ENST00000497933 KIF27Q86VH2 1401 aa14.98□□□□□ -0.01
LRRC55-201ENST00000497933 DDRGK1Q96HY6 314 aa14.96□□□□□ -0.01
LRRC55-201ENST00000497933 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
LRRC55-201ENST00000497933 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
LRRC55-201ENST00000497933 ARXQ96QS3 562 aa14.95□□□□□ -0.02
LRRC55-201ENST00000497933 WDR43Q15061 677 aaKnown RBP eCLIP14.95□□□□□ -0.02
LRRC55-201ENST00000497933 EIF4G2P78344 907 aaKnown RBP eCLIP14.93□□□□□ -0.02
LRRC55-201ENST00000497933 CEP162Q5TB80 1403 aa14.93□□□□□ -0.02
LRRC55-201ENST00000497933 RTN4Q9NQC3 1192 aaKnown RBP14.91□□□□□ -0.02
LRRC55-201ENST00000497933 MRS2Q9HD23 443 aa14.91□□□□□ -0.02
LRRC55-201ENST00000497933 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
LRRC55-201ENST00000497933 KCNH8Q96L42 1107 aa14.9□□□□□ -0.02
LRRC55-201ENST00000497933 NOP58Q9Y2X3 529 aaKnown RBP14.9□□□□□ -0.02
LRRC55-201ENST00000497933 BECN1Q14457 450 aa14.9□□□□□ -0.02
LRRC55-201ENST00000497933 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
LRRC55-201ENST00000497933 TNIKQ9UKE5 1360 aa14.89□□□□□ -0.03
LRRC55-201ENST00000497933 PPM1GO15355 546 aaPredicted RBP14.89□□□□□ -0.03
LRRC55-201ENST00000497933 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
LRRC55-201ENST00000497933 DEKP35659 375 aaKnown RBP14.88□□□□□ -0.03
LRRC55-201ENST00000497933 ERICH6BQ5W0A0 696 aa14.87□□□□□ -0.03
LRRC55-201ENST00000497933 CFDP1Q9UEE9 299 aaPredicted RBP14.87□□□□□ -0.03
LRRC55-201ENST00000497933 TRIM44Q96DX7 344 aaPredicted RBP14.87□□□□□ -0.03
LRRC55-201ENST00000497933 SALL2Q9Y467 1007 aaPredicted RBP14.86□□□□□ -0.03
LRRC55-201ENST00000497933 PPP1R15AO75807 674 aaPredicted RBP14.84□□□□□ -0.03
LRRC55-201ENST00000497933 TNNT2P45379 298 aaPredicted RBP14.83□□□□□ -0.03
LRRC55-201ENST00000497933 CDCA8Q53HL2 280 aa14.83□□□□□ -0.04
LRRC55-201ENST00000497933 RBM19Q9Y4C8 960 aaKnown RBP14.83□□□□□ -0.04
LRRC55-201ENST00000497933 PPP4R2Q9NY27 417 aa14.82□□□□□ -0.04
LRRC55-201ENST00000497933 GOLGA6L22H0YM25 854 aa14.81□□□□□ -0.04
LRRC55-201ENST00000497933 MYH16Q9H6N6 1097 aa14.8□□□□□ -0.04
LRRC55-201ENST00000497933 NCLP19338 710 aaKnown RBP14.79□□□□□ -0.04
LRRC55-201ENST00000497933 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
LRRC55-201ENST00000497933 NAP1L5Q96NT1 182 aaPredicted RBP14.78□□□□□ -0.04
LRRC55-201ENST00000497933 HIRIP3Q9BW71 556 aaPredicted RBP14.78□□□□□ -0.04
LRRC55-201ENST00000497933 LAS1LQ9Y4W2 734 aaKnown RBP14.78□□□□□ -0.04
LRRC55-201ENST00000497933 FHAD1B1AJZ9 1412 aa14.76□□□□□ -0.05
LRRC55-201ENST00000497933 RGL3Q3MIN7 710 aa14.75□□□□□ -0.05
LRRC55-201ENST00000497933 TSHZ2Q9NRE2 1034 aa14.75□□□□□ -0.05
LRRC55-201ENST00000497933 CFAP53Q96M91 514 aa14.74□□□□□ -0.05
LRRC55-201ENST00000497933 KNSTRNQ9Y448 316 aa14.71□□□□□ -0.06
LRRC55-201ENST00000497933 CARMIL1Q5VZK9 1371 aa14.7□□□□□ -0.06
LRRC55-201ENST00000497933 ARID4BQ4LE39 1312 aaPredicted RBP14.7□□□□□ -0.06
LRRC55-201ENST00000497933 C14orf37Q86TY3 774 aa14.7□□□□□ -0.06
LRRC55-201ENST00000497933 CARD11Q9BXL7 1154 aa14.69□□□□□ -0.06
LRRC55-201ENST00000497933 CDK11BP21127 795 aaKnown RBP14.69□□□□□ -0.06
LRRC55-201ENST00000497933 CCNB3Q8WWL7 1395 aa14.69□□□□□ -0.06
LRRC55-201ENST00000497933 CECR2Q9BXF3 1484 aa14.68□□□□□ -0.06
LRRC55-201ENST00000497933 PTMAP06454 111 aaKnown RBP14.67□□□□□ -0.06
LRRC55-201ENST00000497933 CUX2O14529 1486 aa14.66□□□□□ -0.06
LRRC55-201ENST00000497933 B4GALNT3Q6L9W6 998 aa14.64□□□□□ -0.07
LRRC55-201ENST00000497933 TIMELESSQ9UNS1 1208 aa14.63□□□□□ -0.07
LRRC55-201ENST00000497933 DNTTIP2Q5QJE6 756 aaKnown RBP14.62□□□□□ -0.07
LRRC55-201ENST00000497933 ZBTB7CA1YPR0 619 aa14.61□□□□□ -0.07
LRRC55-201ENST00000497933 NUDCQ9Y266 331 aa14.6□□□□□ -0.07
LRRC55-201ENST00000497933 POGKQ9P215 609 aa14.6□□□□□ -0.07
LRRC55-201ENST00000497933 CASC1Q6TDU7 716 aa14.59□□□□□ -0.07
LRRC55-201ENST00000497933 KANK1Q14678 1352 aa14.59□□□□□ -0.07
LRRC55-201ENST00000497933 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.59□□□□□ -0.07
LRRC55-201ENST00000497933 ZRSR1Q15695 479 aaKnown RBP14.59□□□□□ -0.07
LRRC55-201ENST00000497933 A0A0G2JS52 829 aa14.59□□□□□ -0.07
LRRC55-201ENST00000497933 PDS5BQ9NTI5 1447 aa14.58□□□□□ -0.07
LRRC55-201ENST00000497933 SMARCA2P51531 1590 aa14.58□□□□□ -0.08
LRRC55-201ENST00000497933 SENP3Q9H4L4 574 aaPredicted RBP14.58□□□□□ -0.08
LRRC55-201ENST00000497933 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
LRRC55-201ENST00000497933 L1TD1Q5T7N2 865 aaKnown RBP14.58□□□□□ -0.08
LRRC55-201ENST00000497933 CCER2I3L3R5 266 aa14.57□□□□□ -0.08
LRRC55-201ENST00000497933 HDGFP51858 240 aaKnown RBP14.57□□□□□ -0.08
LRRC55-201ENST00000497933 MAPK8IP3Q9UPT6 1336 aa14.56□□□□□ -0.08
LRRC55-201ENST00000497933 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
LRRC55-201ENST00000497933 CARMIL2Q6F5E8 1435 aa14.55□□□□□ -0.08
LRRC55-201ENST00000497933 SOGA1O94964 1423 aa14.55□□□□□ -0.08
LRRC55-201ENST00000497933 SIN3AQ96ST3 1273 aa14.54□□□□□ -0.08
LRRC55-201ENST00000497933 TMF1P82094 1093 aa14.52□□□□□ -0.08
LRRC55-201ENST00000497933 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
LRRC55-201ENST00000497933 VPS8Q8N3P4 1428 aa14.52□□□□□ -0.09
LRRC55-201ENST00000497933 PLEKHG5O94827 1062 aa14.52□□□□□ -0.09
LRRC55-201ENST00000497933 PNNQ9H307 717 aaKnown RBP14.52□□□□□ -0.09
LRRC55-201ENST00000497933 CHMP4BQ9H444 224 aaKnown RBP14.51□□□□□ -0.09
LRRC55-201ENST00000497933 FTSJ3Q8IY81 847 aaKnown RBP14.51□□□□□ -0.09
LRRC55-201ENST00000497933 MROH2BQ7Z745 1585 aa14.5□□□□□ -0.09
LRRC55-201ENST00000497933 DCAF11Q8TEB1 546 aa14.49□□□□□ -0.09
LRRC55-201ENST00000497933 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
LRRC55-201ENST00000497933 GOLGA6L6A8MZA4 724 aa14.49□□□□□ -0.09
LRRC55-201ENST00000497933 SENP3-EIF4A1A0A087X0R7 540 aa14.48□□□□□ -0.09
LRRC55-201ENST00000497933 MS4A1P11836 297 aa14.48□□□□□ -0.09
LRRC55-201ENST00000497933 FMN1Q68DA7 1419 aa14.48□□□□□ -0.09
LRRC55-201ENST00000497933 RGS3P49796 1198 aa14.47□□□□□ -0.09
LRRC55-201ENST00000497933 SETD5Q9C0A6 1442 aa14.47□□□□□ -0.09
LRRC55-201ENST00000497933 NRDCO43847 1150 aa14.46□□□□□ -0.09
LRRC55-201ENST00000497933 IPO9Q96P70 1041 aaKnown RBP14.46□□□□□ -0.1
LRRC55-201ENST00000497933 HSP90AB1P08238 724 aaKnown RBP14.45□□□□□ -0.1
LRRC55-201ENST00000497933 NEUROD2Q15784 382 aa14.45□□□□□ -0.1
LRRC55-201ENST00000497933 CHAF1AQ13111 956 aaPredicted RBP14.44□□□□□ -0.1
LRRC55-201ENST00000497933 EFCAB2Q5VUJ9 269 aa14.44□□□□□ -0.1
LRRC55-201ENST00000497933 LMOD2Q6P5Q4 547 aa14.44□□□□□ -0.1
LRRC55-201ENST00000497933 MSNP26038 577 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms