RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
NPHP1-211ENST00000496524 CHMP4BQ9H444 224 aaKnown RBP10.66□□□□□ -0.7
NPHP1-211ENST00000496524 KIAA2012Q0VF49 1180 aa10.65□□□□□ -0.7
NPHP1-211ENST00000496524 ARID4BQ4LE39 1312 aaPredicted RBP10.64□□□□□ -0.71
NPHP1-211ENST00000496524 HSP90AB1P08238 724 aaKnown RBP10.62□□□□□ -0.71
NPHP1-211ENST00000496524 PNNQ9H307 717 aaKnown RBP10.62□□□□□ -0.71
NPHP1-211ENST00000496524 GOLGA6L4A6NEF3 574 aa10.62□□□□□ -0.71
NPHP1-211ENST00000496524 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
NPHP1-211ENST00000496524 DRC7Q8IY82 874 aa10.61□□□□□ -0.71
NPHP1-211ENST00000496524 MRS2Q9HD23 443 aa10.61□□□□□ -0.71
NPHP1-211ENST00000496524 SALL2Q9Y467 1007 aaPredicted RBP10.61□□□□□ -0.71
NPHP1-211ENST00000496524 SCAF1Q9H7N4 1312 aaKnown RBP10.61□□□□□ -0.71
NPHP1-211ENST00000496524 NOC3LQ8WTT2 800 aaKnown RBP10.6□□□□□ -0.71
NPHP1-211ENST00000496524 DEKP35659 375 aaKnown RBP10.58□□□□□ -0.72
NPHP1-211ENST00000496524 MS4A1P11836 297 aa10.57□□□□□ -0.72
NPHP1-211ENST00000496524 HSCBQ8IWL3 235 aa10.56□□□□□ -0.72
NPHP1-211ENST00000496524 ESF1Q9H501 851 aaKnown RBP10.56□□□□□ -0.72
NPHP1-211ENST00000496524 SYAP1Q96A49 352 aaPredicted RBP10.55□□□□□ -0.72
NPHP1-211ENST00000496524 HSP90AA2PQ14568 343 aaPredicted RBP10.55□□□□□ -0.72
NPHP1-211ENST00000496524 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
NPHP1-211ENST00000496524 FTSJ3Q8IY81 847 aaKnown RBP10.54□□□□□ -0.72
NPHP1-211ENST00000496524 A0A0U1RQG5 324 aaPredicted RBP10.54□□□□□ -0.72
NPHP1-211ENST00000496524 PPP4R2Q9NY27 417 aa10.54□□□□□ -0.72
NPHP1-211ENST00000496524 MCCP23508 829 aa10.54□□□□□ -0.72
NPHP1-211ENST00000496524 TPM4P67936 248 aa10.54□□□□□ -0.72
NPHP1-211ENST00000496524 STAG3Q9UJ98 1225 aa10.53□□□□□ -0.72
NPHP1-211ENST00000496524 GOLGA6L3A6NEY3 463 aa10.53□□□□□ -0.72
NPHP1-211ENST00000496524 GBP4Q96PP9 640 aa10.53□□□□□ -0.72
NPHP1-211ENST00000496524 FGD1P98174 961 aa10.52□□□□□ -0.72
NPHP1-211ENST00000496524 LAS1LQ9Y4W2 734 aaKnown RBP10.52□□□□□ -0.72
NPHP1-211ENST00000496524 HTATSF1O43719 755 aaKnown RBP10.52□□□□□ -0.73
NPHP1-211ENST00000496524 TULP1O00294 542 aaPredicted RBP10.5□□□□□ -0.73
NPHP1-211ENST00000496524 GPS2Q13227 327 aa10.5□□□□□ -0.73
NPHP1-211ENST00000496524 CCDC34Q96HJ3 373 aa10.5□□□□□ -0.73
NPHP1-211ENST00000496524 IRX6P78412 446 aaPredicted RBP10.49□□□□□ -0.73
NPHP1-211ENST00000496524 CFAP53Q96M91 514 aa10.48□□□□□ -0.73
NPHP1-211ENST00000496524 TPRNQ4KMQ1 711 aa10.47□□□□□ -0.73
NPHP1-211ENST00000496524 KCNJ4P48050 445 aa10.47□□□□□ -0.73
NPHP1-211ENST00000496524 EIF4G2P78344 907 aaKnown RBP eCLIP10.47□□□□□ -0.73
NPHP1-211ENST00000496524 CSPP1Q1MSJ5 1256 aa10.46□□□□□ -0.74
NPHP1-211ENST00000496524 CDCA8Q53HL2 280 aa10.46□□□□□ -0.74
NPHP1-211ENST00000496524 PHF14O94880 888 aa10.45□□□□□ -0.74
NPHP1-211ENST00000496524 NOM1Q5C9Z4 860 aaKnown RBP10.45□□□□□ -0.74
NPHP1-211ENST00000496524 APPP05067 770 aa10.45□□□□□ -0.74
NPHP1-211ENST00000496524 DCAF1Q9Y4B6 1507 aa10.44□□□□□ -0.74
NPHP1-211ENST00000496524 CHGAP10645 457 aaKnown RBP10.43□□□□□ -0.74
NPHP1-211ENST00000496524 SUPT16HQ9Y5B9 1047 aaKnown RBP10.43□□□□□ -0.74
NPHP1-211ENST00000496524 TEX35Q5T0J7 233 aa10.43□□□□□ -0.74
NPHP1-211ENST00000496524 RRP12Q5JTH9 1297 aaKnown RBP10.43□□□□□ -0.74
NPHP1-211ENST00000496524 MIER1Q8N108 512 aa10.42□□□□□ -0.74
NPHP1-211ENST00000496524 CCDC70Q6NSX1 233 aa10.41□□□□□ -0.74
NPHP1-211ENST00000496524 GNL2Q13823 731 aaKnown RBP10.41□□□□□ -0.74
NPHP1-211ENST00000496524 ZNF777Q9ULD5 760 aaPredicted RBP10.4□□□□□ -0.74
NPHP1-211ENST00000496524 CEP89Q96ST8 783 aa10.4□□□□□ -0.74
NPHP1-211ENST00000496524 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.4□□□□□ -0.74
NPHP1-211ENST00000496524 VSIG10Q8N0Z9 540 aa10.4□□□□□ -0.74
NPHP1-211ENST00000496524 TPM3P06753 285 aa10.4□□□□□ -0.74
NPHP1-211ENST00000496524 CLSTN1O94985 981 aa10.39□□□□□ -0.75
NPHP1-211ENST00000496524 NAP1L2Q9ULW6 460 aaPredicted RBP10.39□□□□□ -0.75
NPHP1-211ENST00000496524 HAP1P54257 671 aaPredicted RBP10.39□□□□□ -0.75
NPHP1-211ENST00000496524 ZNF771Q7L3S4 317 aaPredicted RBP10.38□□□□□ -0.75
NPHP1-211ENST00000496524 HMMRO75330 724 aa10.38□□□□□ -0.75
NPHP1-211ENST00000496524 GOLGA2Q08379 1002 aa10.38□□□□□ -0.75
NPHP1-211ENST00000496524 RGS3P49796 1198 aa10.38□□□□□ -0.75
NPHP1-211ENST00000496524 OS9Q13438 667 aaPredicted RBP10.37□□□□□ -0.75
NPHP1-211ENST00000496524 PRM3Q9NNZ6 103 aa10.37□□□□□ -0.75
NPHP1-211ENST00000496524 NUDCQ9Y266 331 aa10.37□□□□□ -0.75
NPHP1-211ENST00000496524 MTERF4Q7Z6M4 381 aaKnown RBP10.36□□□□□ -0.75
NPHP1-211ENST00000496524 MAPK8IP3Q9UPT6 1336 aa10.36□□□□□ -0.75
NPHP1-211ENST00000496524 KNSTRNQ9Y448 316 aa10.36□□□□□ -0.75
NPHP1-211ENST00000496524 CALD1Q05682 793 aaKnown RBP10.36□□□□□ -0.75
NPHP1-211ENST00000496524 NCBP3Q53F19 620 aaKnown RBP10.35□□□□□ -0.75
NPHP1-211ENST00000496524 ARID3AQ99856 593 aa10.35□□□□□ -0.75
NPHP1-211ENST00000496524 KIAA1211Q6ZU35 1233 aa10.35□□□□□ -0.75
NPHP1-211ENST00000496524 RBM19Q9Y4C8 960 aaKnown RBP10.33□□□□□ -0.76
NPHP1-211ENST00000496524 CDR1P51861 262 aa10.33□□□□□ -0.76
NPHP1-211ENST00000496524 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
NPHP1-211ENST00000496524 MAP7D2Q96T17 732 aa10.32□□□□□ -0.76
NPHP1-211ENST00000496524 CWC15Q9P013 229 aaKnown RBP10.32□□□□□ -0.76
NPHP1-211ENST00000496524 CSRNP3Q8WYN3 585 aa10.31□□□□□ -0.76
NPHP1-211ENST00000496524 TCERG1O14776 1098 aaKnown RBP10.31□□□□□ -0.76
NPHP1-211ENST00000496524 HSP90B1P14625 803 aaKnown RBP10.31□□□□□ -0.76
NPHP1-211ENST00000496524 DDX11L8A8MPP1 907 aa10.31□□□□□ -0.76
NPHP1-211ENST00000496524 CCDC191Q8NCU4 936 aa10.3□□□□□ -0.76
NPHP1-211ENST00000496524 TSPY4P0CV99 314 aa10.3□□□□□ -0.76
NPHP1-211ENST00000496524 TSPY10P0CW01 314 aa10.3□□□□□ -0.76
NPHP1-211ENST00000496524 ACBD3Q9H3P7 528 aa10.3□□□□□ -0.76
NPHP1-211ENST00000496524 KIF3AQ9Y496 699 aa10.3□□□□□ -0.76
NPHP1-211ENST00000496524 STK11IPQ8N1F8 1099 aa10.3□□□□□ -0.76
NPHP1-211ENST00000496524 CCDC66A2RUB6 948 aa10.3□□□□□ -0.76
NPHP1-211ENST00000496524 SKOR2Q2VWA4 1001 aaPredicted RBP10.3□□□□□ -0.76
NPHP1-211ENST00000496524 FBLN2P98095 1184 aa10.29□□□□□ -0.76
NPHP1-211ENST00000496524 CHMP4CQ96CF2 233 aa10.29□□□□□ -0.76
NPHP1-211ENST00000496524 TPM1P09493 284 aa10.29□□□□□ -0.76
NPHP1-211ENST00000496524 RDXP35241 583 aaKnown RBP10.29□□□□□ -0.76
NPHP1-211ENST00000496524 A0A0G2JS52 829 aa10.29□□□□□ -0.76
NPHP1-211ENST00000496524 FRAT1Q92837 279 aaPredicted RBP10.28□□□□□ -0.76
NPHP1-211ENST00000496524 GZF1Q9H116 711 aaPredicted RBP10.28□□□□□ -0.76
NPHP1-211ENST00000496524 TAOK2Q9UL54 1235 aa10.28□□□□□ -0.76
NPHP1-211ENST00000496524 KDM2AQ9Y2K7 1162 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms