RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 ANP32BQ92688 251 aaKnown RBP8.17□□□□□ -1.1
PHC3-214ENST00000494943 PODXL2Q9NZ53 605 aa8.17□□□□□ -1.1
PHC3-214ENST00000494943 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.17□□□□□ -1.1
PHC3-214ENST00000494943 NPM2Q86SE8 214 aaKnown RBP8.15□□□□□ -1.1
PHC3-214ENST00000494943 NAP1L5Q96NT1 182 aaPredicted RBP8.15□□□□□ -1.1
PHC3-214ENST00000494943 DDX10Q13206 875 aaKnown RBP8.15□□□□□ -1.11
PHC3-214ENST00000494943 SALL2Q9Y467 1007 aaPredicted RBP8.15□□□□□ -1.11
PHC3-214ENST00000494943 NCAPD3P42695 1498 aa8.15□□□□□ -1.11
PHC3-214ENST00000494943 SMARCA2P51531 1590 aa8.14□□□□□ -1.11
PHC3-214ENST00000494943 TRIM52Q96A61 297 aa8.14□□□□□ -1.11
PHC3-214ENST00000494943 TRIM44Q96DX7 344 aaPredicted RBP8.13□□□□□ -1.11
PHC3-214ENST00000494943 RSF1Q96T23 1441 aaPredicted RBP8.13□□□□□ -1.11
PHC3-214ENST00000494943 PABPN1Q86U42 306 aaKnown RBP eCLIP8.13□□□□□ -1.11
PHC3-214ENST00000494943 FAM43AQ8N2R8 423 aa8.13□□□□□ -1.11
PHC3-214ENST00000494943 HSP90AA2PQ14568 343 aaPredicted RBP8.12□□□□□ -1.11
PHC3-214ENST00000494943 BECN1Q14457 450 aa8.11□□□□□ -1.11
PHC3-214ENST00000494943 CEP164Q9UPV0 1460 aa8.11□□□□□ -1.11
PHC3-214ENST00000494943 BAZ1AQ9NRL2 1556 aaPredicted RBP8.11□□□□□ -1.11
PHC3-214ENST00000494943 TCERG1O14776 1098 aaKnown RBP8.11□□□□□ -1.11
PHC3-214ENST00000494943 CLIP1P30622 1438 aa8.1□□□□□ -1.11
PHC3-214ENST00000494943 TONSLQ96HA7 1378 aa8.1□□□□□ -1.11
PHC3-214ENST00000494943 CECR2Q9BXF3 1484 aa8.1□□□□□ -1.11
PHC3-214ENST00000494943 GSE1Q14687 1217 aa8.1□□□□□ -1.11
PHC3-214ENST00000494943 ZNF326Q5BKZ1 582 aaKnown RBP8.1□□□□□ -1.11
PHC3-214ENST00000494943 VSIG10Q8N0Z9 540 aa8.1□□□□□ -1.11
PHC3-214ENST00000494943 PNNQ9H307 717 aaKnown RBP8.08□□□□□ -1.12
PHC3-214ENST00000494943 ARID4BQ4LE39 1312 aaPredicted RBP8.08□□□□□ -1.12
PHC3-214ENST00000494943 ATAD2BQ9ULI0 1458 aa8.08□□□□□ -1.12
PHC3-214ENST00000494943 RRP9O43818 475 aaKnown RBP8.07□□□□□ -1.12
PHC3-214ENST00000494943 MSH5O43196 834 aa8.07□□□□□ -1.12
PHC3-214ENST00000494943 UPF2Q9HAU5 1272 aaKnown RBP8.07□□□□□ -1.12
PHC3-214ENST00000494943 VPS8Q8N3P4 1428 aa8.06□□□□□ -1.12
PHC3-214ENST00000494943 LAS1LQ9Y4W2 734 aaKnown RBP8.05□□□□□ -1.12
PHC3-214ENST00000494943 PRDM2Q13029 1718 aa8.05□□□□□ -1.12
PHC3-214ENST00000494943 C11orf95C9JLR9 678 aaPredicted RBP8.05□□□□□ -1.12
PHC3-214ENST00000494943 PTMSP20962 102 aa8.05□□□□□ -1.12
PHC3-214ENST00000494943 IRX6P78412 446 aaPredicted RBP8.04□□□□□ -1.12
PHC3-214ENST00000494943 MS4A1P11836 297 aa8.04□□□□□ -1.12
PHC3-214ENST00000494943 MAP7D2Q96T17 732 aa8.04□□□□□ -1.12
PHC3-214ENST00000494943 DHX57Q6P158 1386 aaKnown RBP8.03□□□□□ -1.12
PHC3-214ENST00000494943 MROH2BQ7Z745 1585 aa8.03□□□□□ -1.12
PHC3-214ENST00000494943 TPM2P07951 284 aa8.02□□□□□ -1.13
PHC3-214ENST00000494943 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.02□□□□□ -1.13
PHC3-214ENST00000494943 BAZ1BQ9UIG0 1483 aaKnown RBP8.01□□□□□ -1.13
PHC3-214ENST00000494943 MRS2Q9HD23 443 aa8.01□□□□□ -1.13
PHC3-214ENST00000494943 MTERF4Q7Z6M4 381 aaKnown RBP8.01□□□□□ -1.13
PHC3-214ENST00000494943 B4GALNT3Q6L9W6 998 aa8.01□□□□□ -1.13
PHC3-214ENST00000494943 IL27Q8NEV9 243 aa8□□□□□ -1.13
PHC3-214ENST00000494943 THOC2Q8NI27 1593 aaKnown RBP8□□□□□ -1.13
PHC3-214ENST00000494943 CDK11BP21127 795 aaKnown RBP8□□□□□ -1.13
PHC3-214ENST00000494943 FAM9BQ8IZU0 186 aa7.98□□□□□ -1.13
PHC3-214ENST00000494943 FAM50AQ14320 339 aaKnown RBP7.97□□□□□ -1.13
PHC3-214ENST00000494943 ZBED9Q6R2W3 1325 aa7.97□□□□□ -1.13
PHC3-214ENST00000494943 LAMC3Q9Y6N6 1575 aa7.97□□□□□ -1.13
PHC3-214ENST00000494943 GOLGA6L3A6NEY3 463 aa7.96□□□□□ -1.13
PHC3-214ENST00000494943 WIZO95785 1651 aa7.96□□□□□ -1.13
PHC3-214ENST00000494943 CCNB3Q8WWL7 1395 aa7.96□□□□□ -1.14
PHC3-214ENST00000494943 CNGB1Q14028 1251 aaPredicted RBP7.96□□□□□ -1.14
PHC3-214ENST00000494943 SETD5Q9C0A6 1442 aa7.95□□□□□ -1.14
PHC3-214ENST00000494943 WASHC2AQ641Q2 1341 aa7.95□□□□□ -1.14
PHC3-214ENST00000494943 EIF4G2P78344 907 aaKnown RBP eCLIP7.95□□□□□ -1.14
PHC3-214ENST00000494943 NUDCQ9Y266 331 aa7.94□□□□□ -1.14
PHC3-214ENST00000494943 GOLGA6L22H0YM25 854 aa7.94□□□□□ -1.14
PHC3-214ENST00000494943 MSNP26038 577 aaKnown RBP7.93□□□□□ -1.14
PHC3-214ENST00000494943 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
PHC3-214ENST00000494943 KIF21AQ7Z4S6 1674 aa7.92□□□□□ -1.14
PHC3-214ENST00000494943 ISY1Q9ULR0 285 aaKnown RBP7.92□□□□□ -1.14
PHC3-214ENST00000494943 TOP2AP11388 1531 aaKnown RBP7.92□□□□□ -1.14
PHC3-214ENST00000494943 ZMYND15Q9H091 742 aa7.91□□□□□ -1.14
PHC3-214ENST00000494943 KIF21BO75037 1637 aa7.91□□□□□ -1.14
PHC3-214ENST00000494943 TAF3Q5VWG9 929 aa7.91□□□□□ -1.14
PHC3-214ENST00000494943 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.91□□□□□ -1.14
PHC3-214ENST00000494943 PDE4AP27815 886 aa7.9□□□□□ -1.14
PHC3-214ENST00000494943 PPP1R15AO75807 674 aaPredicted RBP7.89□□□□□ -1.15
PHC3-214ENST00000494943 BRPF3Q9ULD4 1205 aa7.89□□□□□ -1.15
PHC3-214ENST00000494943 CUX2O14529 1486 aa7.89□□□□□ -1.15
PHC3-214ENST00000494943 TMC1Q8TDI8 760 aa7.89□□□□□ -1.15
PHC3-214ENST00000494943 NFKBIBQ15653 356 aa7.89□□□□□ -1.15
PHC3-214ENST00000494943 FRAT1Q92837 279 aaPredicted RBP7.89□□□□□ -1.15
PHC3-214ENST00000494943 PAK3O75914 559 aaPredicted RBP7.88□□□□□ -1.15
PHC3-214ENST00000494943 ATP1B4Q9UN42 357 aaPredicted RBP7.88□□□□□ -1.15
PHC3-214ENST00000494943 PDE4CQ08493 712 aa7.88□□□□□ -1.15
PHC3-214ENST00000494943 PDE3BQ13370 1112 aa7.88□□□□□ -1.15
PHC3-214ENST00000494943 DDX11L8A8MPP1 907 aa7.87□□□□□ -1.15
PHC3-214ENST00000494943 POLR3GLQ9BT43 218 aa7.87□□□□□ -1.15
PHC3-214ENST00000494943 PDCL3Q9H2J4 239 aa7.87□□□□□ -1.15
PHC3-214ENST00000494943 SMG6Q86US8 1419 aaKnown RBP7.87□□□□□ -1.15
PHC3-214ENST00000494943 CSPP1Q1MSJ5 1256 aa7.87□□□□□ -1.15
PHC3-214ENST00000494943 RAB3GAP2Q9H2M9 1393 aa7.86□□□□□ -1.15
PHC3-214ENST00000494943 WDR62O43379 1518 aa7.86□□□□□ -1.15
PHC3-214ENST00000494943 CANXP27824 592 aaKnown RBP7.86□□□□□ -1.15
PHC3-214ENST00000494943 CALD1Q05682 793 aaKnown RBP7.85□□□□□ -1.15
PHC3-214ENST00000494943 RRBP1Q9P2E9 1410 aaKnown RBP7.85□□□□□ -1.15
PHC3-214ENST00000494943 SKOR2Q2VWA4 1001 aaPredicted RBP7.85□□□□□ -1.15
PHC3-214ENST00000494943 MYH16Q9H6N6 1097 aa7.85□□□□□ -1.15
PHC3-214ENST00000494943 MRE11P49959 708 aa7.85□□□□□ -1.15
PHC3-214ENST00000494943 KCNH8Q96L42 1107 aa7.85□□□□□ -1.15
PHC3-214ENST00000494943 FHAD1B1AJZ9 1412 aa7.84□□□□□ -1.15
PHC3-214ENST00000494943 GBP4Q96PP9 640 aa7.84□□□□□ -1.15
PHC3-214ENST00000494943 CNTLNQ9NXG0 1405 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms