RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 NACADO15069 1562 aa21.61■■□□□ 1.05
BRAT1-206ENST00000493232 RRP7BPQ9NSQ0 103 aa21.6■■□□□ 1.05
BRAT1-206ENST00000493232 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
BRAT1-206ENST00000493232 CDCA8Q53HL2 280 aa21.56■■□□□ 1.04
BRAT1-206ENST00000493232 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
BRAT1-206ENST00000493232 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
BRAT1-206ENST00000493232 EIF5BO60841 1220 aaKnown RBP21.51■■□□□ 1.03
BRAT1-206ENST00000493232 C14orf37Q86TY3 774 aa21.5■■□□□ 1.03
BRAT1-206ENST00000493232 A0A0G2JS52 829 aa21.49■■□□□ 1.03
BRAT1-206ENST00000493232 ZBTB7CA1YPR0 619 aa21.47■■□□□ 1.03
BRAT1-206ENST00000493232 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
BRAT1-206ENST00000493232 CFDP1Q9UEE9 299 aaPredicted RBP21.47■■□□□ 1.03
BRAT1-206ENST00000493232 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
BRAT1-206ENST00000493232 KIF27Q86VH2 1401 aa21.45■■□□□ 1.02
BRAT1-206ENST00000493232 BECN1Q14457 450 aa21.44■■□□□ 1.02
BRAT1-206ENST00000493232 MIER1Q8N108 512 aa21.44■■□□□ 1.02
BRAT1-206ENST00000493232 HIRIP3Q9BW71 556 aaPredicted RBP21.44■■□□□ 1.02
BRAT1-206ENST00000493232 DDRGK1Q96HY6 314 aa21.43■■□□□ 1.02
BRAT1-206ENST00000493232 RGL3Q3MIN7 710 aa21.42■■□□□ 1.02
BRAT1-206ENST00000493232 KNSTRNQ9Y448 316 aa21.42■■□□□ 1.02
BRAT1-206ENST00000493232 BAZ1BQ9UIG0 1483 aaKnown RBP21.41■■□□□ 1.02
BRAT1-206ENST00000493232 CDK11BP21127 795 aaKnown RBP21.41■■□□□ 1.02
BRAT1-206ENST00000493232 NBR1Q14596 966 aa21.4■■□□□ 1.02
BRAT1-206ENST00000493232 NCLP19338 710 aaKnown RBP21.39■■□□□ 1.01
BRAT1-206ENST00000493232 GLIPR1L2Q4G1C9 344 aa21.39■■□□□ 1.01
BRAT1-206ENST00000493232 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
BRAT1-206ENST00000493232 ARID4BQ4LE39 1312 aaPredicted RBP21.37■■□□□ 1.01
BRAT1-206ENST00000493232 ANP32EQ9BTT0 268 aa21.37■■□□□ 1.01
BRAT1-206ENST00000493232 CEP164Q9UPV0 1460 aa21.37■■□□□ 1.01
BRAT1-206ENST00000493232 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
BRAT1-206ENST00000493232 CARD11Q9BXL7 1154 aa21.35■■□□□ 1.01
BRAT1-206ENST00000493232 GOLGA6L22H0YM25 854 aa21.34■■□□□ 1.01
BRAT1-206ENST00000493232 TNIKQ9UKE5 1360 aa21.33■■□□□ 1.01
BRAT1-206ENST00000493232 ARXQ96QS3 562 aa21.33■■□□□ 1.01
BRAT1-206ENST00000493232 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
BRAT1-206ENST00000493232 PLEKHG5O94827 1062 aa21.32■■□□□ 1
BRAT1-206ENST00000493232 CASC1Q6TDU7 716 aa21.3■■□□□ 1
BRAT1-206ENST00000493232 NUDCQ9Y266 331 aa21.3■■□□□ 1
BRAT1-206ENST00000493232 MAPK8IP3Q9UPT6 1336 aa21.29■■□□□ 1
BRAT1-206ENST00000493232 FTSJ3Q8IY81 847 aaKnown RBP21.27■■□□□ 1
BRAT1-206ENST00000493232 PPM1GO15355 546 aaPredicted RBP21.26■□□□□ 0.99
BRAT1-206ENST00000493232 POGKQ9P215 609 aa21.25■□□□□ 0.99
BRAT1-206ENST00000493232 CHMP4BQ9H444 224 aaKnown RBP21.23■□□□□ 0.99
BRAT1-206ENST00000493232 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
BRAT1-206ENST00000493232 TRIM44Q96DX7 344 aaPredicted RBP21.2■□□□□ 0.98
BRAT1-206ENST00000493232 CCNB3Q8WWL7 1395 aa21.2■□□□□ 0.98
BRAT1-206ENST00000493232 ZRSR1Q15695 479 aaKnown RBP21.19■□□□□ 0.98
BRAT1-206ENST00000493232 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
BRAT1-206ENST00000493232 MS4A1P11836 297 aa21.18■□□□□ 0.98
BRAT1-206ENST00000493232 PNNQ9H307 717 aaKnown RBP21.17■□□□□ 0.98
BRAT1-206ENST00000493232 KANK1Q14678 1352 aa21.15■□□□□ 0.98
BRAT1-206ENST00000493232 LAS1LQ9Y4W2 734 aaKnown RBP21.14■□□□□ 0.97
BRAT1-206ENST00000493232 NEUROD2Q15784 382 aa21.13■□□□□ 0.97
BRAT1-206ENST00000493232 HDGFP51858 240 aaKnown RBP21.11■□□□□ 0.97
BRAT1-206ENST00000493232 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
BRAT1-206ENST00000493232 LMOD2Q6P5Q4 547 aa21.1■□□□□ 0.97
BRAT1-206ENST00000493232 TMF1P82094 1093 aa21.1■□□□□ 0.97
BRAT1-206ENST00000493232 SUPT16HQ9Y5B9 1047 aaKnown RBP21.1■□□□□ 0.97
BRAT1-206ENST00000493232 PPP4R2Q9NY27 417 aa21.07■□□□□ 0.96
BRAT1-206ENST00000493232 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
BRAT1-206ENST00000493232 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
BRAT1-206ENST00000493232 PTMAP06454 111 aaKnown RBP21.06■□□□□ 0.96
BRAT1-206ENST00000493232 SIN3AQ96ST3 1273 aa21.05■□□□□ 0.96
BRAT1-206ENST00000493232 U2SURPO15042 1029 aaKnown RBP21.04■□□□□ 0.96
BRAT1-206ENST00000493232 FRAT1Q92837 279 aaPredicted RBP21.04■□□□□ 0.96
BRAT1-206ENST00000493232 CARMIL1Q5VZK9 1371 aa21.04■□□□□ 0.96
BRAT1-206ENST00000493232 CC2D1BQ5T0F9 858 aaKnown RBP21.02■□□□□ 0.96
BRAT1-206ENST00000493232 OS9Q13438 667 aaPredicted RBP21.02■□□□□ 0.95
BRAT1-206ENST00000493232 TNNT2P45379 298 aaPredicted RBP21.01■□□□□ 0.95
BRAT1-206ENST00000493232 SENP3-EIF4A1A0A087X0R7 540 aa21■□□□□ 0.95
BRAT1-206ENST00000493232 NPHP1O15259 732 aa21■□□□□ 0.95
BRAT1-206ENST00000493232 DCAF11Q8TEB1 546 aa21■□□□□ 0.95
BRAT1-206ENST00000493232 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
BRAT1-206ENST00000493232 CUX2O14529 1486 aa20.99■□□□□ 0.95
BRAT1-206ENST00000493232 RGS3P49796 1198 aa20.97■□□□□ 0.95
BRAT1-206ENST00000493232 FGD1P98174 961 aa20.95■□□□□ 0.94
BRAT1-206ENST00000493232 SRPK2P78362 688 aaKnown RBP20.94■□□□□ 0.94
BRAT1-206ENST00000493232 KCNJ4P48050 445 aa20.93■□□□□ 0.94
BRAT1-206ENST00000493232 HSP90AB1P08238 724 aaKnown RBP20.92■□□□□ 0.94
BRAT1-206ENST00000493232 MORC1Q86VD1 984 aa20.92■□□□□ 0.94
BRAT1-206ENST00000493232 CFAP44Q96MT7 982 aa20.9■□□□□ 0.94
BRAT1-206ENST00000493232 GOLGA6L6A8MZA4 724 aa20.9■□□□□ 0.94
BRAT1-206ENST00000493232 GOLGA2Q08379 1002 aa20.9■□□□□ 0.94
BRAT1-206ENST00000493232 DNTTIP2Q5QJE6 756 aaKnown RBP20.9■□□□□ 0.94
BRAT1-206ENST00000493232 ARHGAP35Q9NRY4 1499 aa20.89■□□□□ 0.94
BRAT1-206ENST00000493232 CARMIL2Q6F5E8 1435 aa20.89■□□□□ 0.94
BRAT1-206ENST00000493232 ERICH6BQ5W0A0 696 aa20.89■□□□□ 0.93
BRAT1-206ENST00000493232 SETD5Q9C0A6 1442 aa20.88■□□□□ 0.93
BRAT1-206ENST00000493232 CCER2I3L3R5 266 aa20.86■□□□□ 0.93
BRAT1-206ENST00000493232 TPRNQ4KMQ1 711 aa20.86■□□□□ 0.93
BRAT1-206ENST00000493232 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
BRAT1-206ENST00000493232 HDGFL2Q7Z4V5 671 aaPredicted RBP20.85■□□□□ 0.93
BRAT1-206ENST00000493232 MLECQ14165 292 aa20.85■□□□□ 0.93
BRAT1-206ENST00000493232 NRDCO43847 1150 aa20.85■□□□□ 0.93
BRAT1-206ENST00000493232 MCCP23508 829 aa20.84■□□□□ 0.93
BRAT1-206ENST00000493232 RTF1Q92541 710 aaKnown RBP20.84■□□□□ 0.93
BRAT1-206ENST00000493232 HSCBQ8IWL3 235 aa20.82■□□□□ 0.92
BRAT1-206ENST00000493232 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
BRAT1-206ENST00000493232 TRHP20396 242 aaPredicted RBP20.82■□□□□ 0.92
BRAT1-206ENST00000493232 NOP58Q9Y2X3 529 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms