RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 NUBP1P53384 320 aa10.45□□□□□ -0.74
SF3A3-207ENST00000488934 RASEFQ8IZ41 740 aa10.45□□□□□ -0.74
SF3A3-207ENST00000488934 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
SF3A3-207ENST00000488934 IFNLR1Q8IU57 520 aaPredicted RBP10.43□□□□□ -0.74
SF3A3-207ENST00000488934 RB1CC1Q8TDY2 1594 aa10.43□□□□□ -0.74
SF3A3-207ENST00000488934 GABBR2O75899 941 aa10.42□□□□□ -0.74
SF3A3-207ENST00000488934 GSE1Q14687 1217 aa10.41□□□□□ -0.74
SF3A3-207ENST00000488934 DCAF8Q5TAQ9 597 aa10.41□□□□□ -0.74
SF3A3-207ENST00000488934 NACADO15069 1562 aa10.4□□□□□ -0.74
SF3A3-207ENST00000488934 CCDC61Q9Y6R9 512 aa10.4□□□□□ -0.74
SF3A3-207ENST00000488934 PHF12Q96QT6 1004 aa10.39□□□□□ -0.75
SF3A3-207ENST00000488934 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
SF3A3-207ENST00000488934 DCBLD2Q96PD2 775 aa10.32□□□□□ -0.76
SF3A3-207ENST00000488934 KIF12Q96FN5 646 aa10.31□□□□□ -0.76
SF3A3-207ENST00000488934 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
SF3A3-207ENST00000488934 CIZ1Q9ULV3 898 aaPredicted RBP10.31□□□□□ -0.76
SF3A3-207ENST00000488934 ZCCHC6Q5VYS8 1495 aaKnown RBP10.3□□□□□ -0.76
SF3A3-207ENST00000488934 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
SF3A3-207ENST00000488934 MS4A3Q96HJ5 214 aa10.28□□□□□ -0.76
SF3A3-207ENST00000488934 DCAF1Q9Y4B6 1507 aa10.28□□□□□ -0.76
SF3A3-207ENST00000488934 MAP3K13O43283 966 aa10.27□□□□□ -0.77
SF3A3-207ENST00000488934 DCAF8L2P0C7V8 631 aa10.27□□□□□ -0.77
SF3A3-207ENST00000488934 TRIM41Q8WV44 630 aa10.27□□□□□ -0.77
SF3A3-207ENST00000488934 PCDHB13Q9Y5F0 798 aa10.27□□□□□ -0.77
SF3A3-207ENST00000488934 PYGBP11216 843 aa10.25□□□□□ -0.77
SF3A3-207ENST00000488934 CHRM1P11229 460 aaPredicted RBP10.22□□□□□ -0.77
SF3A3-207ENST00000488934 ZNF467Q7Z7K2 595 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-207ENST00000488934 TIE1P35590 1138 aa10.18□□□□□ -0.78
SF3A3-207ENST00000488934 UNC13AQ9UPW8 1703 aa10.18□□□□□ -0.78
SF3A3-207ENST00000488934 IFNL1Q8IU54 200 aa10.17□□□□□ -0.78
SF3A3-207ENST00000488934 ASTLQ6HA08 431 aaPredicted RBP10.14□□□□□ -0.79
SF3A3-207ENST00000488934 ATMINO43313 823 aaPredicted RBP10.12□□□□□ -0.79
SF3A3-207ENST00000488934 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
SF3A3-207ENST00000488934 BMP2KQ9NSY1 1161 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-207ENST00000488934 PCDHB8Q9UN66 801 aa10.11□□□□□ -0.79
SF3A3-207ENST00000488934 SLC39A7Q92504 469 aa10.09□□□□□ -0.79
SF3A3-207ENST00000488934 TMEM106CQ9BVX2 250 aa10.09□□□□□ -0.79
SF3A3-207ENST00000488934 TAOK2Q9UL54 1235 aa10.09□□□□□ -0.79
SF3A3-207ENST00000488934 TTLL13PA6NNM8 815 aa10.08□□□□□ -0.8
SF3A3-207ENST00000488934 PDAP1Q13442 181 aaKnown RBP10.07□□□□□ -0.8
SF3A3-207ENST00000488934 TRPC6Q9Y210 931 aa10.07□□□□□ -0.8
SF3A3-207ENST00000488934 ECM2O94769 699 aaPredicted RBP10.06□□□□□ -0.8
SF3A3-207ENST00000488934 C7P10643 843 aa10.06□□□□□ -0.8
SF3A3-207ENST00000488934 ATN1P54259 1190 aaPredicted RBP10.06□□□□□ -0.8
SF3A3-207ENST00000488934 SHROOM4Q9ULL8 1493 aa10.05□□□□□ -0.8
SF3A3-207ENST00000488934 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
SF3A3-207ENST00000488934 PSEN1P49768 467 aa10.04□□□□□ -0.8
SF3A3-207ENST00000488934 GOLGA2Q08379 1002 aa10.04□□□□□ -0.8
SF3A3-207ENST00000488934 BICRAQ9NZM4 1560 aa10.04□□□□□ -0.8
SF3A3-207ENST00000488934 IER5LQ5T953 404 aa10.03□□□□□ -0.8
SF3A3-207ENST00000488934 TRIM35Q9UPQ4 493 aa10.03□□□□□ -0.8
SF3A3-207ENST00000488934 SCRIBQ14160 1630 aa10.03□□□□□ -0.8
SF3A3-207ENST00000488934 METRNQ9UJH8 293 aa10.02□□□□□ -0.81
SF3A3-207ENST00000488934 PELP1Q8IZL8 1130 aaKnown RBP10.01□□□□□ -0.81
SF3A3-207ENST00000488934 VGFO15240 615 aaPredicted RBP10□□□□□ -0.81
SF3A3-207ENST00000488934 PKD2Q13563 968 aa10□□□□□ -0.81
SF3A3-207ENST00000488934 SEC24BO95487 1268 aa9.99□□□□□ -0.81
SF3A3-207ENST00000488934 LHX8Q68G74 356 aa9.97□□□□□ -0.81
SF3A3-207ENST00000488934 MKRN3Q13064 507 aaKnown RBP9.96□□□□□ -0.82
SF3A3-207ENST00000488934 RNF25Q96BH1 459 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-207ENST00000488934 PLCG2P16885 1265 aa9.93□□□□□ -0.82
SF3A3-207ENST00000488934 CABP2Q9NPB3 220 aa9.92□□□□□ -0.82
SF3A3-207ENST00000488934 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.91□□□□□ -0.82
SF3A3-207ENST00000488934 ZFP91Q96JP5 570 aaPredicted RBP9.91□□□□□ -0.82
SF3A3-207ENST00000488934 RGL2O15211 777 aa9.9□□□□□ -0.82
SF3A3-207ENST00000488934 MAMSTRQ6ZN01 415 aa9.89□□□□□ -0.83
SF3A3-207ENST00000488934 OCEL1Q9H607 264 aa9.89□□□□□ -0.83
SF3A3-207ENST00000488934 AMER1Q5JTC6 1135 aaPredicted RBP9.87□□□□□ -0.83
SF3A3-207ENST00000488934 STK25O00506 426 aa9.86□□□□□ -0.83
SF3A3-207ENST00000488934 IRX5P78411 483 aaPredicted RBP9.86□□□□□ -0.83
SF3A3-207ENST00000488934 BCL11BQ9C0K0 894 aaPredicted RBP9.85□□□□□ -0.83
SF3A3-207ENST00000488934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.83
SF3A3-207ENST00000488934 SCUBE2Q9NQ36 999 aa9.84□□□□□ -0.83
SF3A3-207ENST00000488934 COLQQ9Y215 455 aaPredicted RBP9.84□□□□□ -0.83
SF3A3-207ENST00000488934 STK24Q9Y6E0 443 aa9.84□□□□□ -0.83
SF3A3-207ENST00000488934 SOX12O15370 315 aa9.82□□□□□ -0.84
SF3A3-207ENST00000488934 EIF4G1Q04637 1599 aaKnown RBP9.81□□□□□ -0.84
SF3A3-207ENST00000488934 POTEFA5A3E0 1075 aa9.81□□□□□ -0.84
SF3A3-207ENST00000488934 EFCAB3Q8N7B9 438 aa9.81□□□□□ -0.84
SF3A3-207ENST00000488934 G3V3G9 751 aa9.8□□□□□ -0.84
SF3A3-207ENST00000488934 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-207ENST00000488934 POTEB2H3BUK9 544 aa9.79□□□□□ -0.84
SF3A3-207ENST00000488934 PDCD7Q8N8D1 485 aaKnown RBP9.77□□□□□ -0.85
SF3A3-207ENST00000488934 CC2D2AQ9P2K1 1620 aa9.77□□□□□ -0.85
SF3A3-207ENST00000488934 HS6ST3Q8IZP7 471 aa9.76□□□□□ -0.85
SF3A3-207ENST00000488934 NLRP6P59044 892 aa9.75□□□□□ -0.85
SF3A3-207ENST00000488934 ILDR1Q86SU0 546 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-207ENST00000488934 CHGAP10645 457 aaKnown RBP9.74□□□□□ -0.85
SF3A3-207ENST00000488934 C3orf67Q6ZVT6 689 aa9.73□□□□□ -0.85
SF3A3-207ENST00000488934 OTUD5Q96G74 571 aa9.72□□□□□ -0.85
SF3A3-207ENST00000488934 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.71□□□□□ -0.86
SF3A3-207ENST00000488934 POTEJP0CG39 1038 aa9.7□□□□□ -0.86
SF3A3-207ENST00000488934 RTN4Q9NQC3 1192 aaKnown RBP9.7□□□□□ -0.86
SF3A3-207ENST00000488934 PHF8Q9UPP1 1060 aa9.7□□□□□ -0.86
SF3A3-207ENST00000488934 CECR2Q9BXF3 1484 aa9.7□□□□□ -0.86
SF3A3-207ENST00000488934 RYDENQ9NUL5 291 aaKnown RBP9.69□□□□□ -0.86
SF3A3-207ENST00000488934 BOLA1Q9Y3E2 137 aa9.69□□□□□ -0.86
SF3A3-207ENST00000488934 DPY19L2Q6NUT2 758 aa9.66□□□□□ -0.86
SF3A3-207ENST00000488934 SLAIN1Q8ND83 568 aa9.65□□□□□ -0.86
SF3A3-207ENST00000488934 MFRPQ9BY79 579 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms