RNA–Protein interactions for RNA: ENST00000488541.1

PRKCI-206, Transcript of protein kinase C iota, humanhuman

TSL 2

Gene PRKCI, Length 332 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-206ENST00000488541 PHF12Q96QT6 1004 aa8.56□□□□□ -1.04
PRKCI-206ENST00000488541 MKRN4PQ13434 485 aaPredicted RBP8.54□□□□□ -1.04
PRKCI-206ENST00000488541 ASTLQ6HA08 431 aaPredicted RBP8.52□□□□□ -1.05
PRKCI-206ENST00000488541 ATXN8OSP0DMR3 200 aa8.51□□□□□ -1.05
PRKCI-206ENST00000488541 ATMINO43313 823 aaPredicted RBP8.48□□□□□ -1.05
PRKCI-206ENST00000488541 PAK3O75914 559 aaPredicted RBP8.48□□□□□ -1.05
PRKCI-206ENST00000488541 ST18O60284 1047 aa8.4□□□□□ -1.06
PRKCI-206ENST00000488541 MS4A3Q96HJ5 214 aa8.4□□□□□ -1.06
PRKCI-206ENST00000488541 CREBZFQ9NS37 354 aa8.37□□□□□ -1.07
PRKCI-206ENST00000488541 POTEFA5A3E0 1075 aa8.34□□□□□ -1.07
PRKCI-206ENST00000488541 ATN1P54259 1190 aaPredicted RBP8.33□□□□□ -1.08
PRKCI-206ENST00000488541 CSRNP3Q8WYN3 585 aa8.31□□□□□ -1.08
PRKCI-206ENST00000488541 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
PRKCI-206ENST00000488541 SEC24BO95487 1268 aa8.22□□□□□ -1.09
PRKCI-206ENST00000488541 TMEM121BQ9BXQ6 578 aaPredicted RBP8.22□□□□□ -1.09
PRKCI-206ENST00000488541 COLQQ9Y215 455 aaPredicted RBP8.22□□□□□ -1.09
PRKCI-206ENST00000488541 NPM1P06748 294 aaKnown RBP eCLIP8.2□□□□□ -1.1
PRKCI-206ENST00000488541 MARVELD3Q96A59 401 aa8.2□□□□□ -1.1
PRKCI-206ENST00000488541 BMP2KQ9NSY1 1161 aaPredicted RBP8.19□□□□□ -1.1
PRKCI-206ENST00000488541 EHMT2Q96KQ7 1210 aa8.18□□□□□ -1.1
PRKCI-206ENST00000488541 STAG3Q9UJ98 1225 aa8.13□□□□□ -1.11
PRKCI-206ENST00000488541 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
PRKCI-206ENST00000488541 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
PRKCI-206ENST00000488541 TRPC6Q9Y210 931 aa8.11□□□□□ -1.11
PRKCI-206ENST00000488541 MNX1P50219 401 aaPredicted RBP8.09□□□□□ -1.11
PRKCI-206ENST00000488541 SNPHO15079 494 aa8.07□□□□□ -1.12
PRKCI-206ENST00000488541 TIE1P35590 1138 aa8.07□□□□□ -1.12
PRKCI-206ENST00000488541 EMP3P54852 163 aa8.05□□□□□ -1.12
PRKCI-206ENST00000488541 KIF12Q96FN5 646 aa8.05□□□□□ -1.12
PRKCI-206ENST00000488541 TSPYL2Q9H2G4 693 aaPredicted RBP8.05□□□□□ -1.12
PRKCI-206ENST00000488541 IER5LQ5T953 404 aa8.03□□□□□ -1.12
PRKCI-206ENST00000488541 TTLL13PA6NNM8 815 aa8.02□□□□□ -1.13
PRKCI-206ENST00000488541 CCDC61Q9Y6R9 512 aa8.02□□□□□ -1.13
PRKCI-206ENST00000488541 HS3ST6Q96QI5 342 aa8□□□□□ -1.13
PRKCI-206ENST00000488541 POTEB3A0JP26 581 aa7.99□□□□□ -1.13
PRKCI-206ENST00000488541 POTEBQ6S5H4 581 aa7.99□□□□□ -1.13
PRKCI-206ENST00000488541 RNF166Q96A37 237 aaPredicted RBP7.99□□□□□ -1.13
PRKCI-206ENST00000488541 TRIM35Q9UPQ4 493 aa7.98□□□□□ -1.13
PRKCI-206ENST00000488541 FAM205CA6NFA0 338 aa7.97□□□□□ -1.13
PRKCI-206ENST00000488541 MAP3K13O43283 966 aa7.96□□□□□ -1.14
PRKCI-206ENST00000488541 PLCG2P16885 1265 aa7.94□□□□□ -1.14
PRKCI-206ENST00000488541 CCDC180Q9P1Z9 1646 aa7.92□□□□□ -1.14
PRKCI-206ENST00000488541 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.9□□□□□ -1.14
PRKCI-206ENST00000488541 SPDYE4A6NLX3 237 aa7.88□□□□□ -1.15
PRKCI-206ENST00000488541 MYT1LQ9UL68 1186 aa7.86□□□□□ -1.15
PRKCI-206ENST00000488541 IRX5P78411 483 aaPredicted RBP7.81□□□□□ -1.16
PRKCI-206ENST00000488541 TMEM106CQ9BVX2 250 aa7.77□□□□□ -1.17
PRKCI-206ENST00000488541 OCEL1Q9H607 264 aa7.76□□□□□ -1.17
PRKCI-206ENST00000488541 PCDHB13Q9Y5F0 798 aa7.76□□□□□ -1.17
PRKCI-206ENST00000488541 SGIP1Q9BQI5 828 aa7.73□□□□□ -1.17
PRKCI-206ENST00000488541 C3orf67Q6ZVT6 689 aa7.72□□□□□ -1.17
PRKCI-206ENST00000488541 RASEFQ8IZ41 740 aa7.7□□□□□ -1.18
PRKCI-206ENST00000488541 PROM2Q8N271 834 aa7.7□□□□□ -1.18
PRKCI-206ENST00000488541 IFNL1Q8IU54 200 aa7.68□□□□□ -1.18
PRKCI-206ENST00000488541 PLA2G2EQ9NZK7 142 aa7.68□□□□□ -1.18
PRKCI-206ENST00000488541 ERBB3P21860 1342 aa7.68□□□□□ -1.18
PRKCI-206ENST00000488541 PTGER2P43116 358 aa7.66□□□□□ -1.18
PRKCI-206ENST00000488541 PLEKHG5O94827 1062 aa7.65□□□□□ -1.18
PRKCI-206ENST00000488541 ZCCHC6Q5VYS8 1495 aaKnown RBP7.65□□□□□ -1.18
PRKCI-206ENST00000488541 HOXB1P14653 301 aaPredicted RBP7.6□□□□□ -1.19
PRKCI-206ENST00000488541 VARS2Q5ST30 1063 aaKnown RBP7.6□□□□□ -1.19
PRKCI-206ENST00000488541 ABCC9O60706 1549 aa7.59□□□□□ -1.19
PRKCI-206ENST00000488541 HOXB3P14651 431 aaPredicted RBP7.58□□□□□ -1.2
PRKCI-206ENST00000488541 ZNF710Q8N1W2 664 aa7.58□□□□□ -1.2
PRKCI-206ENST00000488541 DCAF1Q9Y4B6 1507 aa7.57□□□□□ -1.2
PRKCI-206ENST00000488541 L3MBTL3Q96JM7 780 aaPredicted RBP7.57□□□□□ -1.2
PRKCI-206ENST00000488541 MIER1Q8N108 512 aa7.56□□□□□ -1.2
PRKCI-206ENST00000488541 PDCD7Q8N8D1 485 aaKnown RBP7.56□□□□□ -1.2
PRKCI-206ENST00000488541 MYO15BQ96JP2 1530 aa7.54□□□□□ -1.2
PRKCI-206ENST00000488541 ANKRD13DQ6ZTN6 518 aa7.52□□□□□ -1.21
PRKCI-206ENST00000488541 ZNF687Q8N1G0 1237 aa7.51□□□□□ -1.21
PRKCI-206ENST00000488541 FKBP8Q14318 412 aa7.5□□□□□ -1.21
PRKCI-206ENST00000488541 PLCD3Q8N3E9 789 aa7.5□□□□□ -1.21
PRKCI-206ENST00000488541 IRX2Q9BZI1 471 aaPredicted RBP7.5□□□□□ -1.21
PRKCI-206ENST00000488541 DOK7Q18PE1 504 aa7.48□□□□□ -1.21
PRKCI-206ENST00000488541 ZBTB47Q9UFB7 747 aaPredicted RBP7.48□□□□□ -1.21
PRKCI-206ENST00000488541 HCSTQ9UBK5 93 aa7.47□□□□□ -1.21
PRKCI-206ENST00000488541 DCAF8L2P0C7V8 631 aa7.46□□□□□ -1.22
PRKCI-206ENST00000488541 NACADO15069 1562 aa7.46□□□□□ -1.22
PRKCI-206ENST00000488541 RIMBP2O15034 1052 aa7.42□□□□□ -1.22
PRKCI-206ENST00000488541 FAM212AQ96EL1 285 aa7.42□□□□□ -1.22
PRKCI-206ENST00000488541 GOLGA2Q08379 1002 aa7.4□□□□□ -1.22
PRKCI-206ENST00000488541 MKRN3Q13064 507 aaKnown RBP7.4□□□□□ -1.22
PRKCI-206ENST00000488541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.4□□□□□ -1.22
PRKCI-206ENST00000488541 NUBP1P53384 320 aa7.39□□□□□ -1.23
PRKCI-206ENST00000488541 LSM11P83369 360 aaKnown RBP eCLIP7.39□□□□□ -1.23
PRKCI-206ENST00000488541 RB1CC1Q8TDY2 1594 aa7.37□□□□□ -1.23
PRKCI-206ENST00000488541 G3V3G9 751 aa7.37□□□□□ -1.23
PRKCI-206ENST00000488541 RGS20O76081 388 aa7.37□□□□□ -1.23
PRKCI-206ENST00000488541 DCAF8Q5TAQ9 597 aa7.37□□□□□ -1.23
PRKCI-206ENST00000488541 PCDHB8Q9UN66 801 aa7.37□□□□□ -1.23
PRKCI-206ENST00000488541 DPY19L2Q6NUT2 758 aa7.32□□□□□ -1.24
PRKCI-206ENST00000488541 ZSWIM6Q9HCJ5 1215 aa7.32□□□□□ -1.24
PRKCI-206ENST00000488541 Q6ZNB5 142 aa7.31□□□□□ -1.24
PRKCI-206ENST00000488541 BOLA1Q9Y3E2 137 aa7.31□□□□□ -1.24
PRKCI-206ENST00000488541 PYGBP11216 843 aa7.3□□□□□ -1.24
PRKCI-206ENST00000488541 SHROOM4Q9ULL8 1493 aa7.29□□□□□ -1.24
PRKCI-206ENST00000488541 GPR153Q6NV75 609 aa7.27□□□□□ -1.25
PRKCI-206ENST00000488541 ILDR1Q86SU0 546 aaPredicted RBP7.25□□□□□ -1.25
PRKCI-206ENST00000488541 FBXO3Q9UK99 471 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms