RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
LCN2-206ENST00000488391 NPM1P06748 294 aaKnown RBP eCLIP19.46■□□□□ 0.71
LCN2-206ENST00000488391 ABCC10Q5T3U5 1492 aa19.38■□□□□ 0.69
LCN2-206ENST00000488391 KDM4FA0A1W2PPD8 638 aa19.31■□□□□ 0.68
LCN2-206ENST00000488391 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
LCN2-206ENST00000488391 MAPKBP1O60336 1514 aa19.3■□□□□ 0.68
LCN2-206ENST00000488391 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
LCN2-206ENST00000488391 DIP2BQ9P265 1576 aa19.28■□□□□ 0.68
LCN2-206ENST00000488391 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
LCN2-206ENST00000488391 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
LCN2-206ENST00000488391 KDM6BO15054 1643 aa19.24■□□□□ 0.67
LCN2-206ENST00000488391 KIAA0586Q9BVV6 1533 aa19.23■□□□□ 0.67
LCN2-206ENST00000488391 IGF1RP08069 1367 aa19.22■□□□□ 0.67
LCN2-206ENST00000488391 PTPRGP23470 1445 aa19.17■□□□□ 0.66
LCN2-206ENST00000488391 KIF27Q86VH2 1401 aa19.14■□□□□ 0.65
LCN2-206ENST00000488391 ILDR1Q86SU0 546 aaPredicted RBP19.12■□□□□ 0.65
LCN2-206ENST00000488391 CUL7Q14999 1698 aa19.09■□□□□ 0.65
LCN2-206ENST00000488391 CARMIL1Q5VZK9 1371 aa19.08■□□□□ 0.65
LCN2-206ENST00000488391 TNIKQ9UKE5 1360 aa19.08■□□□□ 0.65
LCN2-206ENST00000488391 CARMIL2Q6F5E8 1435 aa19.07■□□□□ 0.64
LCN2-206ENST00000488391 ASXL2Q76L83 1435 aa19.07■□□□□ 0.64
LCN2-206ENST00000488391 ABCC2Q92887 1545 aa19.06■□□□□ 0.64
LCN2-206ENST00000488391 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
LCN2-206ENST00000488391 PPRC1Q5VV67 1664 aaKnown RBP19.01■□□□□ 0.63
LCN2-206ENST00000488391 ADGRL1O94910 1474 aa19■□□□□ 0.63
LCN2-206ENST00000488391 GLI2P10070 1586 aa18.99■□□□□ 0.63
LCN2-206ENST00000488391 UACAQ9BZF9 1416 aa18.99■□□□□ 0.63
LCN2-206ENST00000488391 COL17A1Q9UMD9 1497 aaPredicted RBP18.98■□□□□ 0.63
LCN2-206ENST00000488391 UHRF1BP1LA0JNW5 1464 aa18.97■□□□□ 0.63
LCN2-206ENST00000488391 IQGAP2Q13576 1575 aa18.97■□□□□ 0.63
LCN2-206ENST00000488391 EPRSP07814 1512 aaKnown RBP18.93■□□□□ 0.62
LCN2-206ENST00000488391 DISP1Q96F81 1524 aa18.93■□□□□ 0.62
LCN2-206ENST00000488391 KDM5BQ9UGL1 1544 aa18.9■□□□□ 0.62
LCN2-206ENST00000488391 MAP3K4Q9Y6R4 1608 aa18.88■□□□□ 0.61
LCN2-206ENST00000488391 TEX14Q8IWB6 1497 aa18.87■□□□□ 0.61
LCN2-206ENST00000488391 ZCCHC11Q5TAX3 1644 aaKnown RBP18.85■□□□□ 0.61
LCN2-206ENST00000488391 HECW2Q9P2P5 1572 aa18.84■□□□□ 0.61
LCN2-206ENST00000488391 KCNH8Q96L42 1107 aa18.83■□□□□ 0.6
LCN2-206ENST00000488391 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.6
LCN2-206ENST00000488391 RAPGEF2Q9Y4G8 1499 aa18.83■□□□□ 0.6
LCN2-206ENST00000488391 KIAA0556O60303 1618 aa18.79■□□□□ 0.6
LCN2-206ENST00000488391 WDR7Q9Y4E6 1490 aa18.78■□□□□ 0.6
LCN2-206ENST00000488391 CD109Q6YHK3 1445 aa18.76■□□□□ 0.59
LCN2-206ENST00000488391 MAGI3Q5TCQ9 1506 aa18.7■□□□□ 0.58
LCN2-206ENST00000488391 ARID3CA6NKF2 412 aa18.68■□□□□ 0.58
LCN2-206ENST00000488391 CFAP43Q8NDM7 1665 aa18.67■□□□□ 0.58
LCN2-206ENST00000488391 GOLGA3Q08378 1498 aa18.66■□□□□ 0.58
LCN2-206ENST00000488391 ABCA8O94911 1581 aa18.65■□□□□ 0.58
LCN2-206ENST00000488391 KIF21BO75037 1637 aa18.63■□□□□ 0.57
LCN2-206ENST00000488391 CTTNBP2Q8WZ74 1663 aa18.63■□□□□ 0.57
LCN2-206ENST00000488391 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
LCN2-206ENST00000488391 FBXO41Q8TF61 875 aa18.6■□□□□ 0.57
LCN2-206ENST00000488391 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
LCN2-206ENST00000488391 ARAP3Q8WWN8 1544 aa18.58■□□□□ 0.56
LCN2-206ENST00000488391 RAPGEF3O95398 923 aa18.57■□□□□ 0.56
LCN2-206ENST00000488391 ATP10BO94823 1461 aa18.56■□□□□ 0.56
LCN2-206ENST00000488391 PTPRMP28827 1452 aa18.52■□□□□ 0.56
LCN2-206ENST00000488391 PRXQ9BXM0 1461 aa18.52■□□□□ 0.56
LCN2-206ENST00000488391 ARID4BQ4LE39 1312 aaPredicted RBP18.52■□□□□ 0.56
LCN2-206ENST00000488391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
LCN2-206ENST00000488391 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
LCN2-206ENST00000488391 PHLDB1Q86UU1 1377 aa18.51■□□□□ 0.55
LCN2-206ENST00000488391 ADAMTSL3P82987 1691 aa18.49■□□□□ 0.55
LCN2-206ENST00000488391 ABCA9Q8IUA7 1624 aa18.47■□□□□ 0.55
LCN2-206ENST00000488391 RANGAP1P46060 587 aaPredicted RBP18.43■□□□□ 0.54
LCN2-206ENST00000488391 NEO1Q92859 1461 aa18.43■□□□□ 0.54
LCN2-206ENST00000488391 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
LCN2-206ENST00000488391 BCORL1Q5H9F3 1711 aa18.41■□□□□ 0.54
LCN2-206ENST00000488391 MADDQ8WXG6 1647 aa18.4■□□□□ 0.54
LCN2-206ENST00000488391 RAPGEF6Q8TEU7 1601 aa18.38■□□□□ 0.53
LCN2-206ENST00000488391 HSPA2P54652 639 aa18.38■□□□□ 0.53
LCN2-206ENST00000488391 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
LCN2-206ENST00000488391 PCF11O94913 1555 aaKnown RBP18.38■□□□□ 0.53
LCN2-206ENST00000488391 FRMPD1Q5SYB0 1578 aa18.38■□□□□ 0.53
LCN2-206ENST00000488391 PLEKHD1A6NEE1 506 aa18.37■□□□□ 0.53
LCN2-206ENST00000488391 LMTK3Q96Q04 1460 aa18.37■□□□□ 0.53
LCN2-206ENST00000488391 SAMD9Q5K651 1589 aa18.35■□□□□ 0.53
LCN2-206ENST00000488391 DENND4BO75064 1496 aaPredicted RBP18.34■□□□□ 0.53
LCN2-206ENST00000488391 RIMS1Q86UR5 1692 aaKnown RBP18.34■□□□□ 0.53
LCN2-206ENST00000488391 NUP153P49790 1475 aaKnown RBP18.33■□□□□ 0.53
LCN2-206ENST00000488391 AKNAQ7Z591 1439 aa18.32■□□□□ 0.52
LCN2-206ENST00000488391 MLECQ14165 292 aa18.31■□□□□ 0.52
LCN2-206ENST00000488391 FHOD3Q2V2M9 1422 aa18.3■□□□□ 0.52
LCN2-206ENST00000488391 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
LCN2-206ENST00000488391 FANCAO15360 1455 aa18.28■□□□□ 0.52
LCN2-206ENST00000488391 RICTORQ6R327 1708 aa18.28■□□□□ 0.52
LCN2-206ENST00000488391 POGZQ7Z3K3 1410 aa18.27■□□□□ 0.52
LCN2-206ENST00000488391 CERKQ8TCT0 537 aa18.27■□□□□ 0.52
LCN2-206ENST00000488391 YEATS2Q9ULM3 1422 aa18.25■□□□□ 0.51
LCN2-206ENST00000488391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.24■□□□□ 0.51
LCN2-206ENST00000488391 ZFYVE16Q7Z3T8 1539 aa18.22■□□□□ 0.51
LCN2-206ENST00000488391 SIGLEC1Q9BZZ2 1709 aa18.21■□□□□ 0.51
LCN2-206ENST00000488391 TTC37Q6PGP7 1564 aa18.2■□□□□ 0.5
LCN2-206ENST00000488391 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
LCN2-206ENST00000488391 SCAPERQ9BY12 1400 aa18.19■□□□□ 0.5
LCN2-206ENST00000488391 EFCAB5A4FU69 1503 aa18.18■□□□□ 0.5
LCN2-206ENST00000488391 ZMYM4Q5VZL5 1548 aa18.18■□□□□ 0.5
LCN2-206ENST00000488391 CEBPAP49715 358 aaPredicted RBP18.18■□□□□ 0.5
LCN2-206ENST00000488391 HECW1Q76N89 1606 aa18.18■□□□□ 0.5
LCN2-206ENST00000488391 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms