RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-213ENST00000488131 SCUBE2Q9NQ36 999 aa8.94□□□□□ -0.98
CDC42BPA-213ENST00000488131 ASTLQ6HA08 431 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-213ENST00000488131 CREBZFQ9NS37 354 aa8.89□□□□□ -0.99
CDC42BPA-213ENST00000488131 POTEJP0CG39 1038 aa8.88□□□□□ -0.99
CDC42BPA-213ENST00000488131 PHF12Q96QT6 1004 aa8.88□□□□□ -0.99
CDC42BPA-213ENST00000488131 ATMINO43313 823 aaPredicted RBP8.85□□□□□ -0.99
CDC42BPA-213ENST00000488131 CDAN1Q8IWY9 1227 aa8.85□□□□□ -0.99
CDC42BPA-213ENST00000488131 NPM1P06748 294 aaKnown RBP eCLIP8.83□□□□□ -1
CDC42BPA-213ENST00000488131 SPDYE4A6NLX3 237 aa8.83□□□□□ -1
CDC42BPA-213ENST00000488131 RTN4Q9NQC3 1192 aaKnown RBP8.81□□□□□ -1
CDC42BPA-213ENST00000488131 MS4A3Q96HJ5 214 aa8.77□□□□□ -1.01
CDC42BPA-213ENST00000488131 AMER1Q5JTC6 1135 aaPredicted RBP8.71□□□□□ -1.01
CDC42BPA-213ENST00000488131 MMRN1Q13201 1228 aa8.7□□□□□ -1.02
CDC42BPA-213ENST00000488131 ATN1P54259 1190 aaPredicted RBP8.69□□□□□ -1.02
CDC42BPA-213ENST00000488131 SPNS2Q8IVW8 549 aa8.65□□□□□ -1.02
CDC42BPA-213ENST00000488131 POTEFA5A3E0 1075 aa8.64□□□□□ -1.03
CDC42BPA-213ENST00000488131 MNX1P50219 401 aaPredicted RBP8.64□□□□□ -1.03
CDC42BPA-213ENST00000488131 PROM2Q8N271 834 aa8.62□□□□□ -1.03
CDC42BPA-213ENST00000488131 PLEKHG5O94827 1062 aa8.61□□□□□ -1.03
CDC42BPA-213ENST00000488131 ST18O60284 1047 aa8.6□□□□□ -1.03
CDC42BPA-213ENST00000488131 TIE1P35590 1138 aa8.6□□□□□ -1.03
CDC42BPA-213ENST00000488131 SEC24BO95487 1268 aa8.59□□□□□ -1.03
CDC42BPA-213ENST00000488131 BMP2KQ9NSY1 1161 aaPredicted RBP8.58□□□□□ -1.04
CDC42BPA-213ENST00000488131 TMEM121BQ9BXQ6 578 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-213ENST00000488131 IER5LQ5T953 404 aa8.54□□□□□ -1.04
CDC42BPA-213ENST00000488131 SLAIN1Q8ND83 568 aa8.54□□□□□ -1.04
CDC42BPA-213ENST00000488131 KIF12Q96FN5 646 aa8.54□□□□□ -1.04
CDC42BPA-213ENST00000488131 CCDC61Q9Y6R9 512 aa8.54□□□□□ -1.04
CDC42BPA-213ENST00000488131 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
CDC42BPA-213ENST00000488131 COLQQ9Y215 455 aaPredicted RBP8.51□□□□□ -1.05
CDC42BPA-213ENST00000488131 FBXO3Q9UK99 471 aa8.51□□□□□ -1.05
CDC42BPA-213ENST00000488131 SNPHO15079 494 aa8.49□□□□□ -1.05
CDC42BPA-213ENST00000488131 MIER1Q8N108 512 aa8.49□□□□□ -1.05
CDC42BPA-213ENST00000488131 TTLL13PA6NNM8 815 aa8.45□□□□□ -1.06
CDC42BPA-213ENST00000488131 VASPP50552 380 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPA-213ENST00000488131 TRPC6Q9Y210 931 aa8.45□□□□□ -1.06
CDC42BPA-213ENST00000488131 NISCHQ9Y2I1 1504 aa8.44□□□□□ -1.06
CDC42BPA-213ENST00000488131 ZBTB47Q9UFB7 747 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-213ENST00000488131 IFNLR1Q8IU57 520 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-213ENST00000488131 MAP3K13O43283 966 aa8.42□□□□□ -1.06
CDC42BPA-213ENST00000488131 SLC24A1O60721 1099 aa8.41□□□□□ -1.06
CDC42BPA-213ENST00000488131 PLCD3Q8N3E9 789 aa8.4□□□□□ -1.06
CDC42BPA-213ENST00000488131 TRIM35Q9UPQ4 493 aa8.4□□□□□ -1.06
CDC42BPA-213ENST00000488131 SGIP1Q9BQI5 828 aa8.4□□□□□ -1.07
CDC42BPA-213ENST00000488131 PLCG2P16885 1265 aa8.37□□□□□ -1.07
CDC42BPA-213ENST00000488131 RASEFQ8IZ41 740 aa8.34□□□□□ -1.07
CDC42BPA-213ENST00000488131 MARVELD3Q96A59 401 aa8.33□□□□□ -1.08
CDC42BPA-213ENST00000488131 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.32□□□□□ -1.08
CDC42BPA-213ENST00000488131 EMP3P54852 163 aa8.3□□□□□ -1.08
CDC42BPA-213ENST00000488131 PCDHB13Q9Y5F0 798 aa8.3□□□□□ -1.08
CDC42BPA-213ENST00000488131 FAM212AQ96EL1 285 aa8.29□□□□□ -1.08
CDC42BPA-213ENST00000488131 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
CDC42BPA-213ENST00000488131 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
CDC42BPA-213ENST00000488131 PKD2Q13563 968 aa8.28□□□□□ -1.08
CDC42BPA-213ENST00000488131 IRX5P78411 483 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-213ENST00000488131 NUBP1P53384 320 aa8.25□□□□□ -1.09
CDC42BPA-213ENST00000488131 OCEL1Q9H607 264 aa8.25□□□□□ -1.09
CDC42BPA-213ENST00000488131 HS3ST6Q96QI5 342 aa8.24□□□□□ -1.09
CDC42BPA-213ENST00000488131 TMEM106CQ9BVX2 250 aa8.23□□□□□ -1.09
CDC42BPA-213ENST00000488131 DCAF8Q5TAQ9 597 aa8.2□□□□□ -1.1
CDC42BPA-213ENST00000488131 FAM205CA6NFA0 338 aa8.19□□□□□ -1.1
CDC42BPA-213ENST00000488131 KLHL34Q8N239 644 aa8.19□□□□□ -1.1
CDC42BPA-213ENST00000488131 IFNL1Q8IU54 200 aa8.19□□□□□ -1.1
CDC42BPA-213ENST00000488131 SPOCK2Q92563 424 aa8.19□□□□□ -1.1
CDC42BPA-213ENST00000488131 POTEB3A0JP26 581 aa8.17□□□□□ -1.1
CDC42BPA-213ENST00000488131 POTEBQ6S5H4 581 aa8.17□□□□□ -1.1
CDC42BPA-213ENST00000488131 RNF166Q96A37 237 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-213ENST00000488131 C3orf67Q6ZVT6 689 aa8.14□□□□□ -1.11
CDC42BPA-213ENST00000488131 L3MBTL3Q96JM7 780 aaPredicted RBP8.12□□□□□ -1.11
CDC42BPA-213ENST00000488131 GSE1Q14687 1217 aa8.11□□□□□ -1.11
CDC42BPA-213ENST00000488131 DCAF8L2P0C7V8 631 aa8.11□□□□□ -1.11
CDC42BPA-213ENST00000488131 PLCB2Q00722 1185 aa8.1□□□□□ -1.11
CDC42BPA-213ENST00000488131 ECM2O94769 699 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-213ENST00000488131 PYGBP11216 843 aa8.09□□□□□ -1.11
CDC42BPA-213ENST00000488131 GOLGA2Q08379 1002 aa8.08□□□□□ -1.12
CDC42BPA-213ENST00000488131 ZNF467Q7Z7K2 595 aaPredicted RBP8.08□□□□□ -1.12
CDC42BPA-213ENST00000488131 MYT1LQ9UL68 1186 aa8.08□□□□□ -1.12
CDC42BPA-213ENST00000488131 RGL2O15211 777 aa8.06□□□□□ -1.12
CDC42BPA-213ENST00000488131 PTGER2P43116 358 aa8.06□□□□□ -1.12
CDC42BPA-213ENST00000488131 PCDHB8Q9UN66 801 aa8.04□□□□□ -1.12
CDC42BPA-213ENST00000488131 HRCP23327 699 aa8.04□□□□□ -1.12
CDC42BPA-213ENST00000488131 MKRN3Q13064 507 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-213ENST00000488131 CHRM1P11229 460 aaPredicted RBP8.02□□□□□ -1.12
CDC42BPA-213ENST00000488131 PDCD7Q8N8D1 485 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-213ENST00000488131 CIZ1Q9ULV3 898 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-213ENST00000488131 HOXB1P14653 301 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-213ENST00000488131 ERBB3P21860 1342 aa8□□□□□ -1.13
CDC42BPA-213ENST00000488131 ZNF710Q8N1W2 664 aa7.97□□□□□ -1.13
CDC42BPA-213ENST00000488131 HAP1P54257 671 aaPredicted RBP7.96□□□□□ -1.13
CDC42BPA-213ENST00000488131 G3V3G9 751 aa7.96□□□□□ -1.14
CDC42BPA-213ENST00000488131 PSEN1P49768 467 aa7.96□□□□□ -1.14
CDC42BPA-213ENST00000488131 BBXQ8WY36 941 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-213ENST00000488131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.96□□□□□ -1.142e-8■■■■■ 36.5
CDC42BPA-213ENST00000488131 MYT1Q01538 1121 aa7.95□□□□□ -1.14
CDC42BPA-213ENST00000488131 HOXB3P14651 431 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-213ENST00000488131 DOK7Q18PE1 504 aa7.94□□□□□ -1.14
CDC42BPA-213ENST00000488131 RNF25Q96BH1 459 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-213ENST00000488131 PDAP1Q13442 181 aaKnown RBP7.93□□□□□ -1.14
CDC42BPA-213ENST00000488131 RIMBP2O15034 1052 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms