RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 ADCY10Q96PN6 1610 aa11.3□□□□□ -0.6
COL4A3-206ENST00000487633 PPRC1Q5VV67 1664 aaKnown RBP11.28□□□□□ -0.6
COL4A3-206ENST00000487633 MAPKBP1O60336 1514 aa11.28□□□□□ -0.6
COL4A3-206ENST00000487633 ABCA10Q8WWZ4 1543 aa11.28□□□□□ -0.6
COL4A3-206ENST00000487633 PRG4Q92954 1404 aaPredicted RBP11.27□□□□□ -0.6
COL4A3-206ENST00000487633 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
COL4A3-206ENST00000487633 FBXO41Q8TF61 875 aa11.21□□□□□ -0.61
COL4A3-206ENST00000487633 JPH4Q96JJ6 628 aa11.2□□□□□ -0.62
COL4A3-206ENST00000487633 RUSC2Q8N2Y8 1516 aa11.18□□□□□ -0.62
COL4A3-206ENST00000487633 FHAD1B1AJZ9 1412 aa11.17□□□□□ -0.62
COL4A3-206ENST00000487633 ILDR2Q71H61 639 aa11.16□□□□□ -0.62
COL4A3-206ENST00000487633 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL4A3-206ENST00000487633 LMTK3Q96Q04 1460 aa11.11□□□□□ -0.63
COL4A3-206ENST00000487633 CUL7Q14999 1698 aa11.09□□□□□ -0.63
COL4A3-206ENST00000487633 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
COL4A3-206ENST00000487633 GLI2P10070 1586 aa11.07□□□□□ -0.64
COL4A3-206ENST00000487633 TTBK1Q5TCY1 1321 aaPredicted RBP11.07□□□□□ -0.64
COL4A3-206ENST00000487633 MAP3K4Q9Y6R4 1608 aa11.06□□□□□ -0.64
COL4A3-206ENST00000487633 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
COL4A3-206ENST00000487633 ASXL2Q76L83 1435 aa11.06□□□□□ -0.64
COL4A3-206ENST00000487633 ABCC2Q92887 1545 aa11.05□□□□□ -0.64
COL4A3-206ENST00000487633 WRNQ14191 1432 aaPredicted RBP eCLIP11.05□□□□□ -0.64
COL4A3-206ENST00000487633 KIF21BO75037 1637 aa11.04□□□□□ -0.64
COL4A3-206ENST00000487633 TOP2BQ02880 1626 aa11.03□□□□□ -0.64
COL4A3-206ENST00000487633 EPRSP07814 1512 aaKnown RBP11□□□□□ -0.65
COL4A3-206ENST00000487633 SOCS7O14512 581 aa11□□□□□ -0.65
COL4A3-206ENST00000487633 PTPRGP23470 1445 aa10.98□□□□□ -0.65
COL4A3-206ENST00000487633 PLB1Q6P1J6 1458 aa10.97□□□□□ -0.65
COL4A3-206ENST00000487633 KIAA0586Q9BVV6 1533 aa10.97□□□□□ -0.65
COL4A3-206ENST00000487633 DISP3Q9P2K9 1392 aa10.95□□□□□ -0.66
COL4A3-206ENST00000487633 ADAMTSL3P82987 1691 aa10.95□□□□□ -0.66
COL4A3-206ENST00000487633 ZCCHC11Q5TAX3 1644 aaKnown RBP10.95□□□□□ -0.66
COL4A3-206ENST00000487633 PTPRMP28827 1452 aa10.93□□□□□ -0.66
COL4A3-206ENST00000487633 UHRF1BP1LA0JNW5 1464 aa10.91□□□□□ -0.66
COL4A3-206ENST00000487633 PCF11O94913 1555 aaKnown RBP10.9□□□□□ -0.66
COL4A3-206ENST00000487633 KDM5BQ9UGL1 1544 aa10.9□□□□□ -0.66
COL4A3-206ENST00000487633 TEX14Q8IWB6 1497 aa10.9□□□□□ -0.66
COL4A3-206ENST00000487633 TNIKQ9UKE5 1360 aa10.9□□□□□ -0.67
COL4A3-206ENST00000487633 HSPA2P54652 639 aa10.89□□□□□ -0.67
COL4A3-206ENST00000487633 MADDQ8WXG6 1647 aa10.88□□□□□ -0.67
COL4A3-206ENST00000487633 UACAQ9BZF9 1416 aa10.88□□□□□ -0.67
COL4A3-206ENST00000487633 DISP1Q96F81 1524 aa10.88□□□□□ -0.67
COL4A3-206ENST00000487633 IGF1RP08069 1367 aa10.88□□□□□ -0.67
COL4A3-206ENST00000487633 CERKQ8TCT0 537 aa10.86□□□□□ -0.67
COL4A3-206ENST00000487633 BCORL1Q5H9F3 1711 aa10.85□□□□□ -0.67
COL4A3-206ENST00000487633 SPATA31D1Q6ZQQ2 1576 aa10.85□□□□□ -0.67
COL4A3-206ENST00000487633 RIMS1Q86UR5 1692 aaKnown RBP10.83□□□□□ -0.68
COL4A3-206ENST00000487633 CFAP43Q8NDM7 1665 aa10.83□□□□□ -0.68
COL4A3-206ENST00000487633 MAGI3Q5TCQ9 1506 aa10.83□□□□□ -0.68
COL4A3-206ENST00000487633 WDR7Q9Y4E6 1490 aa10.82□□□□□ -0.68
COL4A3-206ENST00000487633 SIGLEC1Q9BZZ2 1709 aa10.82□□□□□ -0.68
COL4A3-206ENST00000487633 CD109Q6YHK3 1445 aa10.82□□□□□ -0.68
COL4A3-206ENST00000487633 IQGAP2Q13576 1575 aa10.82□□□□□ -0.68
COL4A3-206ENST00000487633 KCNH8Q96L42 1107 aa10.8□□□□□ -0.68
COL4A3-206ENST00000487633 CARMIL2Q6F5E8 1435 aa10.8□□□□□ -0.68
COL4A3-206ENST00000487633 PLPPR3Q6T4P5 718 aa10.79□□□□□ -0.68
COL4A3-206ENST00000487633 FRMPD1Q5SYB0 1578 aa10.77□□□□□ -0.68
COL4A3-206ENST00000487633 KIAA0556O60303 1618 aa10.77□□□□□ -0.68
COL4A3-206ENST00000487633 ARAP3Q8WWN8 1544 aa10.77□□□□□ -0.69
COL4A3-206ENST00000487633 RAPGEF3O95398 923 aa10.76□□□□□ -0.69
COL4A3-206ENST00000487633 CARMIL1Q5VZK9 1371 aa10.75□□□□□ -0.69
COL4A3-206ENST00000487633 STRCQ7RTU9 1775 aa10.75□□□□□ -0.69
COL4A3-206ENST00000487633 UGGT2Q9NYU1 1516 aa10.73□□□□□ -0.69
COL4A3-206ENST00000487633 SUPT5HO00267 1087 aaKnown RBP10.71□□□□□ -0.69
COL4A3-206ENST00000487633 ABCA8O94911 1581 aa10.71□□□□□ -0.69
COL4A3-206ENST00000487633 KIF27Q86VH2 1401 aa10.71□□□□□ -0.69
COL4A3-206ENST00000487633 ARID3CA6NKF2 412 aa10.7□□□□□ -0.7
COL4A3-206ENST00000487633 ARID4BQ4LE39 1312 aaPredicted RBP10.69□□□□□ -0.7
COL4A3-206ENST00000487633 ABCA9Q8IUA7 1624 aa10.66□□□□□ -0.7
COL4A3-206ENST00000487633 ARHGEF40Q8TER5 1519 aa10.65□□□□□ -0.7
COL4A3-206ENST00000487633 RICTORQ6R327 1708 aa10.65□□□□□ -0.7
COL4A3-206ENST00000487633 FER1L4A9Z1Z3 1794 aa10.65□□□□□ -0.71
COL4A3-206ENST00000487633 LTBP4Q8N2S1 1624 aa10.64□□□□□ -0.71
COL4A3-206ENST00000487633 YEATS2Q9ULM3 1422 aa10.62□□□□□ -0.71
COL4A3-206ENST00000487633 CEBPAP49715 358 aaPredicted RBP10.62□□□□□ -0.71
COL4A3-206ENST00000487633 MLECQ14165 292 aa10.62□□□□□ -0.71
COL4A3-206ENST00000487633 PREX1Q8TCU6 1659 aa10.62□□□□□ -0.71
COL4A3-206ENST00000487633 ATP10BO94823 1461 aa10.61□□□□□ -0.71
COL4A3-206ENST00000487633 TTC37Q6PGP7 1564 aa10.61□□□□□ -0.71
COL4A3-206ENST00000487633 CTTNBP2Q8WZ74 1663 aa10.6□□□□□ -0.71
COL4A3-206ENST00000487633 NEO1Q92859 1461 aa10.58□□□□□ -0.72
COL4A3-206ENST00000487633 RAPGEF2Q9Y4G8 1499 aa10.57□□□□□ -0.72
COL4A3-206ENST00000487633 P3H3Q8IVL6 736 aa10.54□□□□□ -0.72
COL4A3-206ENST00000487633 HECW1Q76N89 1606 aa10.54□□□□□ -0.72
COL4A3-206ENST00000487633 ARHGEF12Q9NZN5 1544 aa10.53□□□□□ -0.72
COL4A3-206ENST00000487633 PHLDB1Q86UU1 1377 aa10.53□□□□□ -0.72
COL4A3-206ENST00000487633 FANCAO15360 1455 aa10.53□□□□□ -0.72
COL4A3-206ENST00000487633 ZFYVE16Q7Z3T8 1539 aa10.53□□□□□ -0.72
COL4A3-206ENST00000487633 MED1Q15648 1581 aaPredicted RBP10.52□□□□□ -0.72
COL4A3-206ENST00000487633 FHOD3Q2V2M9 1422 aa10.52□□□□□ -0.73
COL4A3-206ENST00000487633 DENND4BO75064 1496 aaPredicted RBP10.52□□□□□ -0.73
COL4A3-206ENST00000487633 ZMYM4Q5VZL5 1548 aa10.52□□□□□ -0.73
COL4A3-206ENST00000487633 AKNAQ7Z591 1439 aa10.51□□□□□ -0.73
COL4A3-206ENST00000487633 C3P01024 1663 aa10.5□□□□□ -0.73
COL4A3-206ENST00000487633 PTPRTO14522 1441 aa10.5□□□□□ -0.73
COL4A3-206ENST00000487633 SETD1BQ9UPS6 1966 aaKnown RBP10.48□□□□□ -0.73
COL4A3-206ENST00000487633 POGZQ7Z3K3 1410 aa10.48□□□□□ -0.73
COL4A3-206ENST00000487633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL4A3-206ENST00000487633 RAPGEF6Q8TEU7 1601 aa10.47□□□□□ -0.73
COL4A3-206ENST00000487633 ZNF335Q9H4Z2 1342 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms