RNA–Protein interactions for RNA: ENST00000486686.1

LAMP3-205, Transcript of lysosomal associated membrane protein 3, human

TSL 5

Gene LAMP3, Length 469 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMP3-205	ENST00000486686	KIF13A	Q9H1H9	1805 aa		29.49	■■■□□ 2.31
LAMP3-205	ENST00000486686	FAM69C	Q0P6D2	419 aa		29.45	■■■□□ 2.31
LAMP3-205	ENST00000486686	ABCC10	Q5T3U5	1492 aa		29.4	■■■□□ 2.3
LAMP3-205	ENST00000486686	RUSC2	Q8N2Y8	1516 aa		29.39	■■■□□ 2.3
LAMP3-205	ENST00000486686	MAPKBP1	O60336	1514 aa		29.35	■■■□□ 2.29
LAMP3-205	ENST00000486686	KIAA0586	Q9BVV6	1533 aa		29.33	■■■□□ 2.29
LAMP3-205	ENST00000486686	IGF1R	P08069	1367 aa		29.29	■■■□□ 2.28
LAMP3-205	ENST00000486686	KIF27	Q86VH2	1401 aa		29.27	■■■□□ 2.28
LAMP3-205	ENST00000486686	ADCY10	Q96PN6	1610 aa		29.25	■■■□□ 2.27
LAMP3-205	ENST00000486686	DIP2B	Q9P265	1576 aa		29.24	■■■□□ 2.27
LAMP3-205	ENST00000486686	CUL7	Q14999	1698 aa		29.21	■■■□□ 2.27
LAMP3-205	ENST00000486686	PTPRG	P23470	1445 aa		29.17	■■■□□ 2.26
LAMP3-205	ENST00000486686	KDM6B	O15054	1643 aa		29.12	■■■□□ 2.25
LAMP3-205	ENST00000486686	CARMIL2	Q6F5E8	1435 aa		29.11	■■■□□ 2.25
LAMP3-205	ENST00000486686	CARMIL1	Q5VZK9	1371 aa		29.1	■■■□□ 2.25
LAMP3-205	ENST00000486686	TNIK	Q9UKE5	1360 aa		29.07	■■■□□ 2.24
LAMP3-205	ENST00000486686	TSPOAP1	O95153	1857 aa		29.06	■■■□□ 2.24
LAMP3-205	ENST00000486686	KDM4F	A0A1W2PPD8	638 aa		29.05	■■■□□ 2.24
LAMP3-205	ENST00000486686	TTBK1	Q5TCY1	1321 aa	Predicted RBP	29.04	■■■□□ 2.24
LAMP3-205	ENST00000486686	ABCC2	Q92887	1545 aa		29.01	■■■□□ 2.23
LAMP3-205	ENST00000486686	PLB1	Q6P1J6	1458 aa		28.99	■■■□□ 2.23
LAMP3-205	ENST00000486686	ASXL2	Q76L83	1435 aa		28.94	■■■□□ 2.22
LAMP3-205	ENST00000486686	IQGAP2	Q13576	1575 aa		28.93	■■■□□ 2.22
LAMP3-205	ENST00000486686	UHRF1BP1L	A0JNW5	1464 aa		28.93	■■■□□ 2.22
LAMP3-205	ENST00000486686	GLI2	P10070	1586 aa		28.91	■■■□□ 2.22
LAMP3-205	ENST00000486686	UACA	Q9BZF9	1416 aa		28.9	■■■□□ 2.22
LAMP3-205	ENST00000486686	DISP1	Q96F81	1524 aa		28.81	■■■□□ 2.2
LAMP3-205	ENST00000486686	KDM5B	Q9UGL1	1544 aa		28.78	■■■□□ 2.2
LAMP3-205	ENST00000486686	RAPGEF2	Q9Y4G8	1499 aa		28.78	■■■□□ 2.2
LAMP3-205	ENST00000486686	PPRC1	Q5VV67	1664 aa	Known RBP	28.77	■■■□□ 2.2
LAMP3-205	ENST00000486686	EPRS	P07814	1512 aa	Known RBP	28.75	■■■□□ 2.19
LAMP3-205	ENST00000486686	UGGT2	Q9NYU1	1516 aa		28.74	■■■□□ 2.19
LAMP3-205	ENST00000486686	TEX14	Q8IWB6	1497 aa		28.74	■■■□□ 2.19
LAMP3-205	ENST00000486686	MAP3K4	Q9Y6R4	1608 aa		28.69	■■■□□ 2.18
LAMP3-205	ENST00000486686	ADGRL1	O94910	1474 aa		28.68	■■■□□ 2.18
LAMP3-205	ENST00000486686	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.66	■■■□□ 2.18
LAMP3-205	ENST00000486686	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.65	■■■□□ 2.18
LAMP3-205	ENST00000486686	KIAA0556	O60303	1618 aa		28.64	■■■□□ 2.18
LAMP3-205	ENST00000486686	WDR7	Q9Y4E6	1490 aa		28.59	■■■□□ 2.17
LAMP3-205	ENST00000486686	ILDR1	Q86SU0	546 aa	Predicted RBP	28.58	■■■□□ 2.17
LAMP3-205	ENST00000486686	GOLGA3	Q08378	1498 aa		28.57	■■■□□ 2.16
LAMP3-205	ENST00000486686	CHIC1	Q5VXU3	224 aa		28.54	■■■□□ 2.16
LAMP3-205	ENST00000486686	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.54	■■■□□ 2.16
LAMP3-205	ENST00000486686	CD109	Q6YHK3	1445 aa		28.52	■■■□□ 2.16
LAMP3-205	ENST00000486686	KCNH8	Q96L42	1107 aa		28.51	■■■□□ 2.15
LAMP3-205	ENST00000486686	MAGI3	Q5TCQ9	1506 aa		28.48	■■■□□ 2.15
LAMP3-205	ENST00000486686	CTTNBP2	Q8WZ74	1663 aa		28.47	■■■□□ 2.15
LAMP3-205	ENST00000486686	CFAP43	Q8NDM7	1665 aa		28.44	■■■□□ 2.14
LAMP3-205	ENST00000486686	ABCA8	O94911	1581 aa		28.42	■■■□□ 2.14
LAMP3-205	ENST00000486686	HECW2	Q9P2P5	1572 aa		28.38	■■■□□ 2.13
LAMP3-205	ENST00000486686	PRX	Q9BXM0	1461 aa		28.34	■■■□□ 2.13
LAMP3-205	ENST00000486686	PHLDB1	Q86UU1	1377 aa		28.3	■■■□□ 2.12
LAMP3-205	ENST00000486686	ARAP3	Q8WWN8	1544 aa		28.28	■■■□□ 2.12
LAMP3-205	ENST00000486686	ATP10B	O94823	1461 aa		28.23	■■■□□ 2.11
LAMP3-205	ENST00000486686	P3H3	Q8IVL6	736 aa		28.23	■■■□□ 2.11
LAMP3-205	ENST00000486686	ARID3C	A6NKF2	412 aa		28.21	■■■□□ 2.11
LAMP3-205	ENST00000486686	KIF21B	O75037	1637 aa		28.17	■■■□□ 2.1
LAMP3-205	ENST00000486686	ABCA9	Q8IUA7	1624 aa		28.14	■■■□□ 2.09
LAMP3-205	ENST00000486686	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.13	■■■□□ 2.09
LAMP3-205	ENST00000486686	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.13	■■■□□ 2.09
LAMP3-205	ENST00000486686	CSRNP3	Q8WYN3	585 aa		28.13	■■■□□ 2.09
LAMP3-205	ENST00000486686	NEO1	Q92859	1461 aa		28.11	■■■□□ 2.09
LAMP3-205	ENST00000486686	RAPGEF3	O95398	923 aa		28.1	■■■□□ 2.09
LAMP3-205	ENST00000486686	SAMD9	Q5K651	1589 aa		28.05	■■■□□ 2.08
LAMP3-205	ENST00000486686	RAPGEF6	Q8TEU7	1601 aa		28.04	■■■□□ 2.08
LAMP3-205	ENST00000486686	PTPRM	P28827	1452 aa		28.04	■■■□□ 2.08
LAMP3-205	ENST00000486686	ARID4B	Q4LE39	1312 aa	Predicted RBP	28.03	■■■□□ 2.08
LAMP3-205	ENST00000486686	FBXO41	Q8TF61	875 aa		28.02	■■■□□ 2.08
LAMP3-205	ENST00000486686	ADAMTSL3	P82987	1691 aa		28.02	■■■□□ 2.08
LAMP3-205	ENST00000486686	PLEKHD1	A6NEE1	506 aa		28.01	■■■□□ 2.07
LAMP3-205	ENST00000486686	NUP153	P49790	1475 aa	Known RBP	27.94	■■■□□ 2.06
LAMP3-205	ENST00000486686	EEA1	Q15075	1411 aa		27.92	■■■□□ 2.06
LAMP3-205	ENST00000486686	BCORL1	Q5H9F3	1711 aa		27.92	■■■□□ 2.06
LAMP3-205	ENST00000486686	RANGAP1	P46060	587 aa	Predicted RBP	27.91	■■■□□ 2.06
LAMP3-205	ENST00000486686	DENND4B	O75064	1496 aa	Predicted RBP	27.9	■■■□□ 2.06
LAMP3-205	ENST00000486686	FRMPD1	Q5SYB0	1578 aa		27.88	■■■□□ 2.05
LAMP3-205	ENST00000486686	AKNA	Q7Z591	1439 aa		27.87	■■■□□ 2.05
LAMP3-205	ENST00000486686	FHOD3	Q2V2M9	1422 aa		27.86	■■■□□ 2.05
LAMP3-205	ENST00000486686	MADD	Q8WXG6	1647 aa		27.84	■■■□□ 2.05
LAMP3-205	ENST00000486686	POGZ	Q7Z3K3	1410 aa		27.84	■■■□□ 2.05
LAMP3-205	ENST00000486686	FANCA	O15360	1455 aa		27.83	■■■□□ 2.05
LAMP3-205	ENST00000486686	PCF11	O94913	1555 aa	Known RBP	27.83	■■■□□ 2.05
LAMP3-205	ENST00000486686	CFAP74	Q9C0B2	1584 aa		27.82	■■■□□ 2.04
LAMP3-205	ENST00000486686	ARHGEF40	Q8TER5	1519 aa		27.81	■■■□□ 2.04
LAMP3-205	ENST00000486686	RICTOR	Q6R327	1708 aa		27.78	■■■□□ 2.04
LAMP3-205	ENST00000486686	LMTK3	Q96Q04	1460 aa		27.78	■■■□□ 2.04
LAMP3-205	ENST00000486686	EFCAB5	A4FU69	1503 aa		27.76	■■■□□ 2.03
LAMP3-205	ENST00000486686	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	27.76	■■■□□ 2.03
LAMP3-205	ENST00000486686	MAGI2	Q86UL8	1455 aa		27.76	■■■□□ 2.03
LAMP3-205	ENST00000486686	RIMS1	Q86UR5	1692 aa	Known RBP	27.74	■■■□□ 2.03
LAMP3-205	ENST00000486686	ZMYM4	Q5VZL5	1548 aa		27.72	■■■□□ 2.03
LAMP3-205	ENST00000486686	ZFYVE16	Q7Z3T8	1539 aa		27.7	■■■□□ 2.02
LAMP3-205	ENST00000486686	PLPPR3	Q6T4P5	718 aa		27.67	■■■□□ 2.02
LAMP3-205	ENST00000486686	TTC37	Q6PGP7	1564 aa		27.67	■■■□□ 2.02
LAMP3-205	ENST00000486686	HSPA2	P54652	639 aa		27.66	■■■□□ 2.02
LAMP3-205	ENST00000486686	PLCH2	O75038	1416 aa		27.66	■■■□□ 2.02
LAMP3-205	ENST00000486686	SCAPER	Q9BY12	1400 aa		27.66	■■■□□ 2.02
LAMP3-205	ENST00000486686	YEATS2	Q9ULM3	1422 aa		27.66	■■■□□ 2.02
LAMP3-205	ENST00000486686	CDK11A	Q9UQ88	783 aa	Predicted RBP	27.65	■■■□□ 2.02
LAMP3-205	ENST00000486686	EFCAB2	Q5VUJ9	269 aa		27.64	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms