RNA–Protein interactions for RNA: ENST00000486621.1

TTC4-204, Transcript of tetratricopeptide repeat domain 4, humanhuman

TSL 2

Gene TTC4, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4-204ENST00000486621 POTEGQ6S5H5 508 aa12.05□□□□□ -0.48
TTC4-204ENST00000486621 SLC39A7Q92504 469 aa12.05□□□□□ -0.48
TTC4-204ENST00000486621 C7P10643 843 aa12.04□□□□□ -0.48
TTC4-204ENST00000486621 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
TTC4-204ENST00000486621 POTEJP0CG39 1038 aa12□□□□□ -0.49
TTC4-204ENST00000486621 MAMSTRQ6ZN01 415 aa11.98□□□□□ -0.49
TTC4-204ENST00000486621 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
TTC4-204ENST00000486621 CCDC61Q9Y6R9 512 aa11.96□□□□□ -0.49
TTC4-204ENST00000486621 PROM2Q8N271 834 aa11.95□□□□□ -0.5
TTC4-204ENST00000486621 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
TTC4-204ENST00000486621 ATN1P54259 1190 aaPredicted RBP11.93□□□□□ -0.5
TTC4-204ENST00000486621 KIF12Q96FN5 646 aa11.9□□□□□ -0.5
TTC4-204ENST00000486621 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
TTC4-204ENST00000486621 LCE2DQ5TA82 110 aaPredicted RBP11.87□□□□□ -0.51
TTC4-204ENST00000486621 NISCHQ9Y2I1 1504 aa11.86□□□□□ -0.51
TTC4-204ENST00000486621 BMP2KQ9NSY1 1161 aaPredicted RBP11.86□□□□□ -0.51
TTC4-204ENST00000486621 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
TTC4-204ENST00000486621 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
TTC4-204ENST00000486621 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
TTC4-204ENST00000486621 MAP3K13O43283 966 aa11.81□□□□□ -0.52
TTC4-204ENST00000486621 TIE1P35590 1138 aa11.81□□□□□ -0.52
TTC4-204ENST00000486621 PLEKHG5O94827 1062 aa11.79□□□□□ -0.52
TTC4-204ENST00000486621 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
TTC4-204ENST00000486621 MIER1Q8N108 512 aa11.75□□□□□ -0.53
TTC4-204ENST00000486621 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
TTC4-204ENST00000486621 COLQQ9Y215 455 aaPredicted RBP11.72□□□□□ -0.53
TTC4-204ENST00000486621 SEC24BO95487 1268 aa11.71□□□□□ -0.53
TTC4-204ENST00000486621 SGIP1Q9BQI5 828 aa11.68□□□□□ -0.54
TTC4-204ENST00000486621 IER5LQ5T953 404 aa11.67□□□□□ -0.54
TTC4-204ENST00000486621 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
TTC4-204ENST00000486621 PCDHB13Q9Y5F0 798 aa11.64□□□□□ -0.55
TTC4-204ENST00000486621 PLCD3Q8N3E9 789 aa11.62□□□□□ -0.55
TTC4-204ENST00000486621 CDAN1Q8IWY9 1227 aa11.59□□□□□ -0.55
TTC4-204ENST00000486621 NUBP1P53384 320 aa11.58□□□□□ -0.56
TTC4-204ENST00000486621 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
TTC4-204ENST00000486621 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
TTC4-204ENST00000486621 SLAIN1Q8ND83 568 aa11.55□□□□□ -0.56
TTC4-204ENST00000486621 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
TTC4-204ENST00000486621 ST18O60284 1047 aa11.52□□□□□ -0.57
TTC4-204ENST00000486621 PLCG2P16885 1265 aa11.51□□□□□ -0.57
TTC4-204ENST00000486621 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
TTC4-204ENST00000486621 ABCC9O60706 1549 aa11.49□□□□□ -0.57
TTC4-204ENST00000486621 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
TTC4-204ENST00000486621 OCEL1Q9H607 264 aa11.4□□□□□ -0.58
TTC4-204ENST00000486621 TMEM121BQ9BXQ6 578 aaPredicted RBP11.39□□□□□ -0.59
TTC4-204ENST00000486621 SNPHO15079 494 aa11.35□□□□□ -0.59
TTC4-204ENST00000486621 PYGBP11216 843 aa11.35□□□□□ -0.59
TTC4-204ENST00000486621 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
TTC4-204ENST00000486621 DCAF8Q5TAQ9 597 aa11.34□□□□□ -0.59
TTC4-204ENST00000486621 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
TTC4-204ENST00000486621 SPNS2Q8IVW8 549 aa11.32□□□□□ -0.6
TTC4-204ENST00000486621 PCDHB8Q9UN66 801 aa11.31□□□□□ -0.6
TTC4-204ENST00000486621 FKBP8Q14318 412 aa11.28□□□□□ -0.6
TTC4-204ENST00000486621 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
TTC4-204ENST00000486621 PDCD7Q8N8D1 485 aaKnown RBP11.25□□□□□ -0.61
TTC4-204ENST00000486621 C3orf67Q6ZVT6 689 aa11.21□□□□□ -0.61
TTC4-204ENST00000486621 ZNF467Q7Z7K2 595 aaPredicted RBP11.2□□□□□ -0.62
TTC4-204ENST00000486621 MKRN3Q13064 507 aaKnown RBP11.19□□□□□ -0.62
TTC4-204ENST00000486621 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
TTC4-204ENST00000486621 FBXO3Q9UK99 471 aa11.19□□□□□ -0.62
TTC4-204ENST00000486621 EMP3P54852 163 aa11.18□□□□□ -0.62
TTC4-204ENST00000486621 GOLGA2Q08379 1002 aa11.18□□□□□ -0.62
TTC4-204ENST00000486621 GSE1Q14687 1217 aa11.16□□□□□ -0.62
TTC4-204ENST00000486621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.13□□□□□ -0.637e-8■■□□□ 12.6
TTC4-204ENST00000486621 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
TTC4-204ENST00000486621 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
TTC4-204ENST00000486621 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
TTC4-204ENST00000486621 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
TTC4-204ENST00000486621 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
TTC4-204ENST00000486621 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
TTC4-204ENST00000486621 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
TTC4-204ENST00000486621 PSEN1P49768 467 aa11.09□□□□□ -0.63
TTC4-204ENST00000486621 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
TTC4-204ENST00000486621 ILDR1Q86SU0 546 aaPredicted RBP11.08□□□□□ -0.64
TTC4-204ENST00000486621 VASPP50552 380 aaPredicted RBP11.06□□□□□ -0.64
TTC4-204ENST00000486621 PDAP1Q13442 181 aaKnown RBP11.02□□□□□ -0.65
TTC4-204ENST00000486621 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
TTC4-204ENST00000486621 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
TTC4-204ENST00000486621 BOLA1Q9Y3E2 137 aa10.99□□□□□ -0.65
TTC4-204ENST00000486621 G3V3G9 751 aa10.97□□□□□ -0.65
TTC4-204ENST00000486621 CABP2Q9NPB3 220 aa10.97□□□□□ -0.65
TTC4-204ENST00000486621 HOXB1P14653 301 aaPredicted RBP10.94□□□□□ -0.66
TTC4-204ENST00000486621 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
TTC4-204ENST00000486621 DNAJC5Q9H3Z4 198 aa10.91□□□□□ -0.66
TTC4-204ENST00000486621 DOK7Q18PE1 504 aa10.9□□□□□ -0.66
TTC4-204ENST00000486621 ERBB3P21860 1342 aa10.88□□□□□ -0.67
TTC4-204ENST00000486621 SPOCK2Q92563 424 aa10.87□□□□□ -0.67
TTC4-204ENST00000486621 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
TTC4-204ENST00000486621 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
TTC4-204ENST00000486621 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
TTC4-204ENST00000486621 RNF166Q96A37 237 aaPredicted RBP10.83□□□□□ -0.68
TTC4-204ENST00000486621 IFNLR1Q8IU57 520 aaPredicted RBP10.82□□□□□ -0.68
TTC4-204ENST00000486621 VARS2Q5ST30 1063 aaKnown RBP10.81□□□□□ -0.68
TTC4-204ENST00000486621 EFCAB3Q8N7B9 438 aa10.79□□□□□ -0.68
TTC4-204ENST00000486621 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
TTC4-204ENST00000486621 MYT1LQ9UL68 1186 aa10.76□□□□□ -0.69
TTC4-204ENST00000486621 TMEM92Q6UXU6 159 aa10.75□□□□□ -0.69
TTC4-204ENST00000486621 MICALL2Q8IY33 904 aa10.75□□□□□ -0.69
TTC4-204ENST00000486621 ZNF687Q8N1G0 1237 aa10.74□□□□□ -0.69
TTC4-204ENST00000486621 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms